Candidatus Methanogranum gryphiswaldense: KRP56_04230
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Entry
KRP56_04230 CDS
T08253
Symbol
trmY
Name
(GenBank) tRNA (pseudouridine(54)-N(1))-methyltransferase TrmY
KO
K16317
tRNA (pseudouridine54-N1)-methyltransferase [EC:
2.1.1.257
]
Organism
meuz
Candidatus Methanogranum gryphiswaldense
Brite
KEGG Orthology (KO) [BR:
meuz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
meuz03016
]
KRP56_04230 (trmY)
Enzymes [BR:
meuz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.257 tRNA (pseudouridine54-N1)-methyltransferase
KRP56_04230 (trmY)
Transfer RNA biogenesis [BR:
meuz03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
KRP56_04230 (trmY)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrn_RNA_2
MinC_N_1
Motif
Other DBs
NCBI-ProteinID:
UAL07063
LinkDB
All DBs
Position
complement(827737..828330)
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AA seq
197 aa
AA seq
DB search
MRYFVITGHKAITTGDFKLDDIAGGAGRLDILCRCVNSAFFLSHDLRKDVDVFLILEGGI
AAPKTIRFCGEDMRYLNPDERSTSSLIRNALLKKIPEGEEIKSSPGVYVSKMSFDDVLEH
LSSKGSFVYLKEDGTDCSKYDFPKDPIFVLGDNRDLTEDEENALLARNPDKICLGPYSLH
ADHCMIIVHNEMDRYLS
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgaggtatttcgtgattactggtcataaggccattactaccggcgatttcaaactagac
gatatcgctggtggcgctggaagactagacatattatgcagatgtgtcaattcagcattt
ttcttaagtcacgatctacgtaaagatgttgatgtatttcttattctggaaggaggaatt
gccgcaccaaagaccattaggttctgtggagaagacatgagatatctaaatccagatgag
aggagtacttcttctttgataaggaatgcacttttgaaaaaaataccagaaggagaggag
ataaaatcctcacccggtgtttatgtttccaaaatgtcatttgatgacgtccttgaacat
ctctcatcaaagggatcattcgtatacctcaaggaagatggcaccgattgtagcaaatat
gattttccaaaggatccaatatttgttttgggagataacagagatcttacagaggatgaa
gaaaatgctctgcttgcaaggaatccagataaaatatgcttaggaccttacagcctgcac
gctgatcattgcatgataattgttcataacgaaatggacaggtatctatcctga
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