KEGG   Methanobacterium paludis: MSWAN_2286
Entry
MSWAN_2286        CDS       T01509                                 
Name
(GenBank) Signal recognition 54 kDa protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
mew  Methanobacterium paludis
Pathway
mew02024  Quorum sensing
mew03060  Protein export
mew03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:mew00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    MSWAN_2286
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    MSWAN_2286
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    MSWAN_2286
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:mew02044]
    MSWAN_2286
Enzymes [BR:mew01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     MSWAN_2286
Secretion system [BR:mew02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   MSWAN_2286
  Eukaryotic Sec-SRP protein
   MSWAN_2286
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_17 cobW Zeta_toxin AAA_22 GTP_EFTU G-alpha AAA_18 AAA_16 ATP_bind_1 DO-GTPase2 ResIII NTPase_1 MMR_HSR1 AAA_19 nSTAND3 Arf AAA_7 AAA_33 6PF2K AAA_30 APS_kinase CbiA AAA_29 NPHP3_N TssR_C
Other DBs
NCBI-ProteinID: AEG19292
UniProt: F6D513
LinkDB
Position
2368360..2369691
AA seq 443 aa
MLDNLGKNLTNTMKKLAGMSIIDKEVVKEVIKDIQRALIQSDVNIKLVLNLSKTIEDRAL
NEEPPKGVTPKEHVIKIVYEELVNLVGEKAQEVEIDKKPYKILFVGLQGSGKTTTIGKIS
RYLQKKGFNPAIICTDTWRPAAYEQLRQLTENMNLPLYGDPENKDALDLAKKGLNEFKKQ
DLIIVDTAGRHKEEKDLLDEMEEISAIVKPDEVILVIDGTIGQQAREQALAFSKTTKIGS
IIITKLDGSAKGGGALSAVAEIGAPIKFIGTGERVDDFEAFDPERFISRLLGMGDIRSLI
EKAEEIAKDDIDMDSVDAMMSGKFTLKDMYSQFEMMNKMGPMKQVMNMIPGMGSKLPKNA
SQMTEEKLGKYKILMDSMTEYELEHPEVIKQSRVKRIARGSGMRNEDVKELMKYYNVTKK
AIKGFGKRKMGGPMGQMMRQMMR
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgttagacaatctgggcaaaaatctgaccaataccatgaaaaaattggcaggaatgagc
ataatcgacaaggaagtcgtaaaagaagttataaaagatattcagagggctcttatccag
tcggatgttaacataaagctggtactaaacctctccaagaccatagaggaccgtgccctg
aatgaggagcctccaaagggtgtcacacccaaggaacacgttataaagatcgtctatgaa
gaactcgtgaatctcgtgggagaaaaggcccaggaagtagagatagacaaaaaaccatac
aaaatactgtttgtagggcttcagggaagtggtaaaaccaccacaattggtaaaatttcc
cgctatcttcagaagaaaggtttcaatccagcgatcatttgtacagatacatggagacct
gcagcctacgaacagctgcgccagctgactgaaaatatgaacctgcctctttacggagat
cctgaaaataaagatgctctggatcttgccaaaaagggtttgaatgagtttaaaaaacag
gacctcataattgtggatactgcaggacgtcataaggaagaaaaggatttactggatgaa
atggaagagatctctgcaattgtcaagcctgacgaggtaatacttgttatcgacggaacc
ataggtcagcaggcaagagagcaggctcttgcattcagcaaaaccaccaagataggatcc
ataatcatcaccaaactcgacggttctgcaaaaggtggaggtgctctttcggctgtggca
gaaattggagcccccatcaaatttataggaacaggagaaagggttgatgactttgaagcc
ttcgatccagaacgttttatatcccggttactgggaatgggcgatataagaagcctgatc
gaaaaggccgaggaaatagctaaagatgacattgatatggactctgtcgatgctatgatg
agtggtaaattcacactcaaggatatgtactcccagttcgagatgatgaacaagatgggt
ccgatgaaacaggttatgaacatgatccctggtatgggaagtaaacttccaaaaaatgcc
tcccaaatgacggaagaaaagcttggtaagtacaaaatactcatggattccatgaccgaa
tacgaacttgaacatcctgaggtcattaaacagtcaagggttaaaagaatagctcgcgga
tctggtatgcgtaatgaagatgttaaagagcttatgaaatactacaacgtcacgaaaaag
gccattaaaggctttggaaaaaggaaaatgggcgggccaatgggtcaaatgatgcgtcaa
atgatgaggtaa

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