Martelella endophytica: TM49_14415
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Entry
TM49_14415 CDS
T03801
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
mey
Martelella endophytica
Pathway
mey03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mey00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TM49_14415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mey03021
]
TM49_14415
03400 DNA repair and recombination proteins [BR:
mey03400
]
TM49_14415
Enzymes [BR:
mey01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TM49_14415
Transcription machinery [BR:
mey03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TM49_14415
DNA repair and recombination proteins [BR:
mey03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TM49_14415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
MinE
Motif
Other DBs
NCBI-ProteinID:
AJY46599
UniProt:
A0A0D5LQU6
LinkDB
All DBs
Position
3156737..3157129
Genome browser
AA seq
130 aa
AA seq
DB search
MARVTVEDCIDKVDNRFDLVLLAGHRARLISQGASITVDRDNDKNPVVALREIADETLSP
DDLKEDLIHSLQRHVEVDEPEADASQAASAEENTDEAPDQPDAIPFDQMSEEELRAGIEG
LVPPEKGDDY
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtgtcacagtagaagactgtattgataaggtcgacaaccggttcgacctcgtc
ctgcttgccggtcaccgcgcgcgcctcatttcccagggcgcatcgatcaccgtcgaccgc
gacaacgacaagaaccccgtcgttgccctgcgtgagatcgccgatgaaacgctgtcgccg
gatgacctcaaggaggatctcatccactcgctgcagcgtcatgtcgaggttgatgagccg
gaggccgatgcctcgcaggccgcaagcgccgaagagaatacagacgaagcccccgatcag
cccgatgcaattcccttcgaccagatgtcggaagaggagctgcgcgccggcatcgaaggc
ctcgtgccgccggaaaaaggcgacgattactga
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