Mycoplasmoides fastidiosum: NPA10_03240
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Entry
NPA10_03240 CDS
T08471
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mfd
Mycoplasmoides fastidiosum
Pathway
mfd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mfd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NPA10_03240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfd03021
]
NPA10_03240
03400 DNA repair and recombination proteins [BR:
mfd03400
]
NPA10_03240
Enzymes [BR:
mfd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NPA10_03240
Transcription machinery [BR:
mfd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NPA10_03240
DNA repair and recombination proteins [BR:
mfd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NPA10_03240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
DOCK-C2
Motif
Other DBs
NCBI-ProteinID:
UUD37555
LinkDB
All DBs
Position
complement(919897..924240)
Genome browser
AA seq
1447 aa
AA seq
DB search
MNNQKPFFIDEISNLVSRRNYSKIPHSQKPPSLVGIQSQSYRDFINVELKRLIQNNFPIV
SNSENLELHFNKIVLRKPEITEFDAWEQSKTYQASLYVQLSLLNKETGEVKILGSKKNKN
SENLIFFGDIPLMTEKGTFIVNGIEKFVISQIVRAPGAYMLTKSQLKLSNSRKKIQEGTI
CELLPLKGALILFYIPEGHRQIRVLARSNSGESAAQFSSSTLLKGLGLTEQQFLAVFENN
DFATETLSGESFNATEILNDPDIQEILAEISQTPDLNELLKEHENRLDLRLYELLVKFHN
RFGDTYNQIRNQLLQRSVEDSKYSVLQSDLRRFFTNANSILELICIERAAKHIITQINIS
YKIAKTATTSYQELLWNYFFEKRMYDMGKVGRYKLNRKLRISERLYRQILAQDIKDIDGK
IVFPKGTLMLKDEIQKFKKLSYEHKLDIIESFKLNHLPKKFKNRDLYREVSFEKIRIFEN
QEENSPILTLIGVPDYTSSDSISFADLLSVFSYLSHIDKEIGSFDDIDHLGNKRMRLISE
LLCNRIQIALLRIEKFIREKMAASEVKMKNISLKNEGNTEQISVKSLINTKPFQIIIKEF
FNSHQLTQFIDQQNPLSELTNKRRISAMGPGGINRDDPNLDIRDVHYSNYGRICPIETPE
GMNIGLIMSLATYSQIDELGFITSPYYKVRNGVITDEIHWLTALREDEYVITEAISPRDK
KNKLLSPVNARYRSFIESFEAKDVDYIDVNPCQVVSISTASIPFLENDDANRALMGANMQ
RQATPLLRPYAPIVGTGLEYPIARDSGMALVAEEDGIVVAADGESLSVRYENLGVNRCHH
LVKFKRSNQDTSNTQTPIVRAGEAIQKGQVLADGPAMQNGELALGQNVLVAFTTWSGYNY
EDAIVLSSRLVQDDLFTSIHIDEHTIECLRTKNGDEEITRQIPNISDDAKRYLDEDGVII
VGAEVYEGDILVGKTSPKAQVEQSSEEKLLQAIFSEKVKQVKDSSLKVPHGGEGVVAAVK
RFSVQSGNELNDDVIEIIKVFVAQKRKIQMGDKMAGRHGNKGIVSRIVPMEDMPHLEDGT
PVDILLNPLGVPSRMNIGQVLEMHLGLAGRKLVLRELIKAYFNNTPTTQIGQMFGLRETN
VVNLLKNFKEHIDEININTEKQALEKLSDVNLTMILKQTGLLTEDLIYKISTPVFSGVNH
TDLIEIMKEAGLDPTINKGKFDLYDGRTGEKFERPISVGISYMLKLDHMVDDKIHARSVG
PYSKITQQPLGGKSQNGGQRFGEMEVWALEAYGAAYNLRELLTVKSDDVQARNAVYSAII
KGRKLPQPLLPESFKLLVKKLEGLCFRINIQYGQNSKLMNSYEFLDAKTEENQIYKNTKT
EAIVDGIDEVNSFSENEIYRHEELELEEVPLDELEDDEALLFDTETEDDDDADNNNHLID
ESVEEEN
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atgaataaccaaaaacccttttttattgacgagattagtaatttagttagtcgtcgtaac
tactctaaaattccccactcgcaaaaacccccaagtttagtcggaattcaatcccaatcc
taccgggatttcattaatgttgaactaaaacgtttaattcaaaacaactttccgattgtt
tctaattctgaaaacctagaattacacttcaacaaaattgtgttgcgcaaacccgaaatt
actgagtttgatgcgtgagagcaatctaaaacatatcaggcttcgctgtatgtgcaacta
agcttgttaaacaaagaaaccggtgaagtaaaaattttaggttccaaaaagaataaaaac
agtgaaaacctaattttcttcggggacattccgttaatgaccgaaaaaggaactttcatt
gttaacgggattgaaaaatttgtgatctcccaaattgtgcgggctccaggggcgtacatg
ttaactaaatcccaactaaaactatcaaactcccgcaaaaaaattcaggaaggaacaatt
tgtgaattgctgcctttaaaaggagcgttaatcttattttatattcctgaaggacaccgt
cagattcgggtgttagcgcgaagtaatagcggtgaaagtgcggcccagttttcttcttcc
acgcttttaaaaggtttaggtttaactgaacagcaatttttagccgtttttgaaaataat
gattttgccactgaaactttgagtggggaatcttttaatgcaactgaaatcctaaatgac
cctgacatccaagaaatcttagctgaaatttctcaaactcctgatttaaacgagttatta
aaagaacacgaaaaccgtttagatttacgcttatacgaattgttagtaaaatttcacaat
cgctttggcgatacttacaaccaaattcgcaaccagttgttacaacgttcagttgaagac
agtaaatactcagttttacaaagtgatttacgccggtttttcactaatgctaacagcatt
ttagaactaatttgtattgaacgcgctgctaaacacatcattacccaaattaatatttcc
tacaaaattgctaaaaccgcaacaacttcttaccaagaattgttgtgaaactacttcttt
gaaaaacggatgtatgacatgggtaaagttggtcggtacaaacttaatcgtaaactgcga
atttctgaacgattataccgtcaaattttagcccaagacattaaagacattgatggtaaa
attgtttttcctaaagggactttaatgttgaaagatgaaatccaaaaattcaaaaaactg
tcttatgaacacaaattagacatcattgaatctttcaaactaaaccacttacctaaaaaa
ttcaaaaaccgagatttataccgcgaagttagttttgaaaaaattcgcatttttgaaaat
caagaagaaaacagtccgatcttaactttaatcggagtgcctgattatacttctagtgat
tcgatctcatttgcagatttattatccgttttttcttatttatcccacattgataaagag
attggtagttttgatgatatcgatcatttaggtaataaacggatgcgtctaatttctgaa
ttattatgcaaccgcatccaaattgccttattacgaattgaaaaattcattcgggaaaaa
atggccgcatctgaagttaagatgaaaaatatttcgttgaaaaacgagggtaataccgaa
caaattagtgttaaatctttaattaacactaaaccgttccaaatcattattaaagaattt
tttaattcccaccaattaacccagttcattgaccaacaaaacccgttatctgaattaact
aacaaacgccgaatttctgcaatgggaccagggggaattaaccgtgatgacccgaaccta
gatattcgggacgttcactattcgaactacggccgaatttgtccaattgaaaccccagag
ggaatgaatattgggctgatcatgtcactggcaacttattcacaaattgatgaattaggg
tttattacttcaccatattacaaagtacgtaacggggtgattacggatgaaattcactga
ctaactgctttacgcgaagatgagtatgtgattactgaagctattagcccccgggataaa
aagaacaaattattatctccagttaacgcacgttatcgttcgtttattgaatcttttgaa
gctaaagatgttgattatattgatgttaacccttgtcaagtagtttccatttccactgca
tccattcccttcttagaaaacgatgatgcgaaccgggccctgatgggagcgaacatgcaa
cgtcaagcaactcctttactgcgtccttatgcaccaattgtggggactgggttagaatac
ccaattgcccgggattcaggtatggctttagtggctgaagaagatggaattgtagtcgca
gccgatggggaaagtctgtcagtgcgttatgaaaatttaggggtgaaccgctgtcaccat
ttggtgaaattcaaacgttctaaccaagatacttctaacacccaaaccccaattgtacga
gcgggtgaagcaattcaaaaaggtcaagttttagccgatggtcccgcgatgcaaaacggg
gaattagcgttaggacaaaacgtgttagtggcgtttaccacttgaagtggctataactat
gaagatgcgatcgtgctttcttcccggttagttcaagatgatttattcacttcgattcac
attgatgaacacaccattgaatgtttgcgaaccaaaaacggggatgaagaaattacccgc
caaattcctaatatttctgatgatgcaaaacgttatttggatgaagatggggtaattatt
gttggggctgaagtttatgaaggcgatattttagttggaaaaacttcacctaaagcccaa
gttgaacaaagttcagaagaaaaattattacaagcaatcttctctgaaaaagttaaacaa
gtgaaagattcttctttaaaagtaccccatggtggtgaaggtgtagtggctgcggtaaaa
cggttctctgtgcaatcagggaatgaactgaacgacgatgtgattgaaatcattaaagtc
tttgttgcccaaaaacgtaaaatccaaatgggggacaaaatggctggacgacatggtaac
aaagggattgtttcccgcattgtgcctatggaagatatgccccacttagaagatggcact
ccagttgatattctgttaaatccactaggtgtaccaagccggatgaacattggccaagtt
ttagagatgcacttgggcttagccggtcgaaaactagtgttacgcgaattaattaaagct
tattttaacaacactccaacaacccaaataggtcaaatgttcgggttacgcgaaactaat
gttgtcaacttgttaaaaaacttcaaagaacacattgatgaaattaacattaacacagag
aaacaagctttagaaaaattgagtgatgttaatctaaccatgattctgaagcagactggt
ttgttaactgaagatttaatttacaaaatttctaccccggttttctcaggggtaaaccac
actgatttaattgaaattatgaaagaagctggtttagacccaaccattaacaaagggaag
tttgatttgtatgatggccgaaccggagagaaatttgaacgcccaatttcagtcggtatt
agttacatgttaaaactagaccacatggttgatgataagattcacgctcgttcagtggga
ccatattccaaaattacccaacaaccattagggggaaaatcccaaaatggtggccaacgg
tttggggaaatggaagtatgagctttagaagcttatggagcagcttataacttacgtgaa
ttattgaccgtgaaatccgatgatgtccaagcccgcaatgcggtttattctgcgattatt
aaggggcgtaaactaccccaaccattactgccagaatcctttaaattgctagtgaaaaaa
ttagaaggtttatgtttccggattaacatccagtatggtcaaaatagcaagctaatgaat
tcttatgaatttttagatgccaaaaccgaagaaaaccaaatctataaaaataccaaaacc
gaagcaattgttgatgggattgatgaagtaaacagtttctcagaaaacgaaatctatcgc
catgaggaattagaactagaagaagtgccattagatgagttagaagatgatgaagcatta
ttgtttgatacagaaactgaagacgacgacgacgctgataacaacaaccatttaatcgac
gaatctgtcgaagaagaaaattaa
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