Micromonospora robiginosa: H1D33_23340
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Entry
H1D33_23340 CDS
T09299
Name
(GenBank) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mfeu
Micromonospora robiginosa
Pathway
mfeu00040
Pentose and glucuronate interconversions
mfeu01100
Metabolic pathways
mfeu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mfeu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
H1D33_23340
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
H1D33_23340
Enzymes [BR:
mfeu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
H1D33_23340
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GFIT
Motif
Pfam:
Pectate_lyase_4
FLgD_tudor
Motif
Other DBs
NCBI-ProteinID:
QLQ36233
UniProt:
A0A7L6B2M6
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Position
complement(1740848..1742197)
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AA seq
449 aa
AA seq
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MRRRTGAAAILAAALTLTVAAPAPAAPAGQRPTLAAELIGRQALAANDGWAAEGAGTTGG
AAATADRVRVVRTRAELVAALGGDNATNATDATPKIVYVAGTIDGFEGPDGTLLDCADLA
DPEYSLPAYLAAYDPAVWGRVNPSGPLEAARVRSVAAQTARTQLNVGSNTTIVGLRGARL
TGLTLMIDRVANVIVRNLEFADARDCFPAWSPTDGDTGNWNSQYDQISVRRSEHVWVDHN
TFTDGDNPDSAQPVHFGRPWQVHDGSLDVTHTASLVTASWNRFVGRDKLMLIGSSNTVGP
DVGRLKVTVRHNLFDGDLQRLPRVRFGQVDVHENHYRLGGAGFEYALGVGVQSAIHAENN
FFTLAADVDPADLIHDWGGTALTERGSWVRRGDRLPRPVDLRAAYNEVHDPDLGGDAGWT
PTLRAAPPLPTPLVPPVVDAWAGAGRLPL
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagacgaaccggagccgccgccatcctcgcggcggcgctcaccctcaccgtcgcc
gcccccgcgccggccgcgcccgccgggcagcgcccgacgctggcggcggagctgatcggc
cggcaggcgctggcggcgaacgacggctgggccgccgagggcgccggcaccaccggcggc
gcggcggcgaccgccgaccgggtacgcgtggtgcgtacccgcgccgagctggtcgccgcg
ctcggcggcgacaacgccaccaacgccaccgacgccaccccgaagatcgtgtacgtggcc
ggcaccatcgacggcttcgagggccccgacggcacgctcctggactgcgccgacctggcc
gacccggagtactcgctgccggcctacctggccgcgtacgacccggcggtctggggtcgg
gtgaacccgagcggcccgctggaggcggcgcgggtccgctcggtggccgcccagaccgcc
cgcacgcagctcaacgtcgggtccaacaccaccatcgtcgggctgcgcggcgcccggctc
accgggctcaccctgatgatcgaccgggtcgcgaacgtgatcgtgcgcaacctggagttc
gccgacgcccgggactgcttcccggcctggtcccccaccgacggcgacaccggcaactgg
aactcccagtacgaccagatctcggtgcgccgcagcgagcacgtctgggtcgaccacaac
acgttcaccgacggtgacaaccccgacagcgcccagccggtccacttcggccgcccctgg
caggtgcacgacggctcgctcgacgtcacgcacaccgccagcctggtcaccgcgtcctgg
aaccggttcgtcggccgggacaagctgatgctgatcggctcctccaacacggtcggcccg
gacgtcggccggttgaaggtcaccgtgcgccacaacctcttcgacggggacctgcaacgg
ctgccccgggtgcgcttcggccaggtcgacgtgcacgagaaccactaccggctcggcggc
gccggtttcgagtacgccctcggcgtcggcgtgcagtccgccatccacgcggagaacaac
ttcttcaccctggccgccgacgtcgacccggcggacctgatccacgactggggcggcacc
gcgctcaccgagcgtgggagctgggtcaggcggggcgaccggctgccccggccggtggac
ctgcgcgccgcgtacaacgaggtccacgacccggacctcggcggcgacgccgggtggacg
ccgaccctgcgcgccgccccgccgctgccgacaccgctggtcccgccggtcgtcgacgcc
tgggccggcgccggccggctgccgctctga
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