Micromonospora robiginosa: H1D33_26345
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Entry
H1D33_26345 CDS
T09299
Name
(GenBank) cellulose binding domain-containing protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mfeu
Micromonospora robiginosa
Pathway
mfeu00040
Pentose and glucuronate interconversions
mfeu01100
Metabolic pathways
mfeu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mfeu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
H1D33_26345
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
H1D33_26345
Enzymes [BR:
mfeu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
H1D33_26345
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GFIT
Motif
Pfam:
Pectate_lyase_4
CBM_2
Beta_helix
Glyco_hydro_28
Motif
Other DBs
NCBI-ProteinID:
QLQ36736
UniProt:
A0A7L6B461
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Position
complement(986678..988048)
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AA seq
456 aa
AA seq
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MSVRRRAKLAAITSAVATTGAALLVGGVLTAGTAHAAAGCRVTYSVDGQWQGGFTGNVAI
TNLGDPISSWSLRWSFGAGQQVSSAWNANATQSGSQVTATNLDYNGAVGTNGTASFGFNG
TWNNSSNPVPSSFALNGVTCTGGTAPTTPAGTPTVTPPSTPPPTSGPTTSPQTGLVGWAT
QNGGTTGGGNSSPTTVTNSSALSSAIRGTNAAVIRVSGTISCSGMLQVGSNKTILGNPGA
TIVGCGLNVSEQHNVIIRNLTFRDWNDDAVNVQSGSTNVWIDHNTLSNGYDGAVDIKRGS
DFVTVSWNRFFNHNKTALLGHSDGNGGQDIGHLRVTYHHNWFDATTQRHPRVRFGNPVHV
YNNYYNSNGGYGVASTMNAGVLVEGNYFENVKDPYHLGEGDSGPGSLVARNNYFVNSGSG
QAGGSVASIPYSYPLDSASSVKSIVTSGAGAGRITP
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtacgacggcgcgccaagctggccgccatcacctccgccgtcgccaccaccggc
gcggccctgctcgtcggcggggtcctgaccgccggcaccgcccacgccgcagccggctgc
cgggtcacctactcggtagacggccagtggcagggcgggttcaccggcaacgtggccatc
accaacctcggcgacccgatctcgtcctggagcctgcgctggtccttcggcgccgggcag
caggtcagctcggcctggaacgcgaacgcgacgcagagcggcagccaggtcaccgccacc
aacctcgactacaacggcgccgtcggcaccaacggcaccgcctcgttcggcttcaacggc
acctggaacaactccagcaacccggtgccgtcgagcttcgcgctgaacggggtcacctgc
accggcgggaccgcgcccaccactccggcgggcacccccacggtcacaccgccgagcacg
ccgccccccacgtccggaccgaccacgtccccgcagaccgggctggtgggctgggccacc
cagaacgggggcaccaccggcggtggtaactcctcccccaccacggtgaccaactcctcc
gcactgagcagcgcgatccggggcaccaacgccgcggtcatccgggtctccggcaccatc
tcctgctccggcatgctgcaggtcggatccaacaagaccatcctcggcaacccgggcgcg
accatcgtgggctgcggcctcaacgtcagcgagcagcacaacgtcatcatccgcaacctc
accttccgggactggaacgacgacgccgtcaacgtccagagcgggtcgacgaacgtctgg
atcgaccacaacacgctcagcaacggctacgacggcgcggtcgacatcaagcgtggctcg
gacttcgtcacggtgtcctggaaccgcttcttcaaccacaacaagaccgcgctgctcggg
cacagcgacggcaacggtggccaggacatcggccacctgcgggtgacctaccaccacaac
tggttcgacgccaccacccagcgtcacccccgggtccgcttcggcaacccggtccacgtc
tacaacaactactacaacagcaacggcggctacggcgtcgcctccaccatgaacgccggc
gtcctcgtcgagggcaactacttcgagaacgtcaaggacccctaccacctcggtgagggc
gactccgggccgggcagcctggtcgcccgcaacaactacttcgtcaactccggcagcggt
caggccggcggcagcgtcgccagcatcccgtactcctacccgctcgacagcgccagcagc
gtcaagtcgatcgtgacgagcggcgccggcgccggccggatcaccccctga
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