Mycolicibacterium farcinogenes: K6L26_25675
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Entry
K6L26_25675 CDS
T07595
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mfg
Mycolicibacterium farcinogenes
Pathway
mfg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mfg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K6L26_25675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfg03021
]
K6L26_25675
03400 DNA repair and recombination proteins [BR:
mfg03400
]
K6L26_25675
Enzymes [BR:
mfg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K6L26_25675
Transcription machinery [BR:
mfg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
K6L26_25675
DNA repair and recombination proteins [BR:
mfg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
K6L26_25675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QZH65338
LinkDB
All DBs
Position
complement(5369703..5373215)
Genome browser
AA seq
1170 aa
AA seq
DB search
MLEGCILAVSSQSKSANAITNNSVPGAPNRVSFAKLREPLEVPGLLDVQTDSFDWLVGSD
EWRQKAVDRGETDPKGGLEEVLEELSPIEDFSGSMSLSFSDPRFDEVKAPVDECKDKDMT
YAAPLFVTAEFINNNTGEIKSQTVFMGDFPMMTEKGTFIINGTERVVVSQLVRSPGVYFD
ESIDKSTEKTLHSVKVIPGRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTNEQI
TERFGFSEIMMGTLEKDSTAGPDEALLDIYRKLRPGEPPTKESAQTLLENLFFKEKRYDL
ARVGRYKVNKKLGLNAGQPITSSTLTEEDVVATIEYLVRLHEGQTTMTVPGGVEVPVEVD
DIDHFGNRRLRTVGELIQNQIRVGLSRMERVVRERMTTQDVEAITPQTLINIRPVVAAIK
EFFGTSQLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGLEVRDVHASHYGRMCPIET
PEGPNIGLIGSLSVYARVNPFGFIETPYRKVVDGVVTDQIDYLTADEEDRHVVAQANSPI
DADGRFTEDRVMVRRKGGEVENVAPSDVDYMDVSPRQMVSVATAMIPFLEHDDANRALMG
ANMQRQAVPLVRSEAPLVGTGMELRAAIDAGDVVVSEKAGVVEEVSADYITVMADDGTRH
TYRMRKFARSNHGTCANQRPIVDAGQRVEAGQVVADGPCTENGEMALGKNLLVAIMPWEG
HNYEDAIILSNRLVEEDVLTSIHIEEHEIDARDTKLGAEEITRDIPNVSDEVLADLDERG
IVRIGAEVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGESGKVI
GIRVFSREDDDELPAGVNELVRVYVAQKRKISDGDKLAGRHGNKGVIGKILPVEDMPFLP
DGTPVDIILNTHGVPRRMNIGQILETHLGWVAKAGWNIDVAAGTPEWASKLPEQLYSAPV
DSIVSTPVFDGAREEELAGLLGSTLPNRDGDVMVDSDGKATLFDGRSGEPFPYPVTVGYM
YMLKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYGAAYTLQEL
LTIKSDDTVGRVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVLSSDGAAIEMR
DGDDEDLERAAANLGINLSRNESASVEDLA
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
gtgctggaaggatgcatcttggcagtctctagccagagcaagtcagcgaacgctatcacc
aataactccgtcccaggagcaccgaaccgagtttcctttgccaagctccgcgaaccgctt
gaggttccggggctgctcgacgttcagacggattccttcgactggctcgtgggttcggat
gagtggcggcagaaggccgtcgatcgcggtgagaccgaccccaagggcggcctcgaagag
gtgctcgaagagctctccccgatcgaggatttctcgggctcgatgtcgctgagcttctcc
gacccgcgcttcgacgaggtcaaggcgccggtcgacgagtgcaaagacaaggacatgacg
tacgcggccccgctgttcgtcacggccgagttcatcaacaacaacaccggtgagatcaag
agccagacggtcttcatgggtgacttcccgatgatgaccgagaagggcaccttcatcatc
aacggcaccgagcgtgtcgtggtgagccagctcgtgcgctctcccggtgtgtacttcgac
gagagcatcgacaagtccaccgagaagacgctgcacagcgtcaaggtgatccccggccgc
ggtgcgtggctggagttcgacgtcgacaagcgcgacaccgtcggcgtccgcatcgaccgc
aagcgtcgtcagccggtcaccgtgctgctcaaggcgctcggttggaccaacgagcagatc
accgagcgcttcgggttctccgagatcatgatgggcaccctggagaaggacagcaccgcc
ggtcccgacgaggcgctgctcgacatctaccgcaagctgcgcccgggcgagccgccgacc
aaggaatccgcgcagaccctgctggagaacctgttcttcaaggagaagcgctacgacctg
gcccgcgtgggtcgctacaaggtcaacaagaagctaggcctcaacgccggccagccgatc
acgtcgtcgacgctgaccgaggaagacgtcgtcgccaccatcgagtacctggtgcgcctg
cacgagggccagaccacgatgaccgtccccggcggcgtcgaggtcccggtcgaggtggac
gacatcgaccacttcggtaaccgtcgtctgcgcaccgtgggtgagctgatccagaatcag
atccgggtcggcctgtcccgcatggagcgcgtcgtgcgtgagcgcatgaccacccaggac
gtcgaggcgatcacgccgcagaccctgatcaacatccgtcccgtcgtggcggcgatcaag
gagttcttcggtaccagccagctgtcgcagttcatggaccagaacaacccgctttcgggt
ctgacccacaagcgtcgcctgtcggcgctgggccccggcggtctgtcccgtgagcgtgcc
ggccttgaggtccgcgacgtgcacgccagccactacggccgcatgtgcccgatcgagacc
cctgagggtccgaacatcggtctgatcggctcgctgtcggtgtacgcccgggtcaacccg
ttcggcttcatcgagacgccgtaccgcaaggtcgtcgacggtgtggtcaccgaccagatc
gactacctgaccgccgacgaggaggaccgccacgtcgtggcgcaggccaactcgccgatc
gacgccgacggccgcttcaccgaagaccgcgtcatggtgcgtcgtaagggcggcgaggtc
gagaacgtggccccgtccgacgtcgactacatggacgtctcgccgcgccagatggtgtct
gtcgcgaccgcgatgatcccgttcctcgagcacgacgacgccaaccgcgccctgatgggt
gccaacatgcagcgccaggcggttccgctggtgcgcagcgaggccccgctggtcggtacc
ggcatggagctgcgtgccgccatcgacgccggcgatgtcgtcgtctccgagaaggcgggc
gtcgtcgaggaggtctcggccgactacatcaccgtgatggccgacgacggcacccggcac
acctaccggatgcgcaagttcgcgcggtccaaccacggcacctgcgccaaccagcgtccg
atcgtggacgccggccagcgcgtggaggccggccaggtcgtcgccgacggtccgtgcacc
gagaacggtgagatggccctgggcaagaacctgctcgtggcgatcatgccgtgggaaggc
cacaactacgaggacgcgatcatcctctcgaaccggttggtcgaagaggacgtgctcacc
tcgattcacatcgaagagcacgagatcgacgcccgcgacaccaagctgggcgccgaggag
atcacccgggacatcccgaacgtctccgatgaggtgctggccgatctcgacgaacgcggc
atcgtccgcatcggcgccgaggtccgcgacggcgacatcctggtcggcaaggtcaccccg
aagggtgagaccgagctgaccccggaagagcgcctgctgcgtgccatcttcggtgagaag
gcacgcgaggtccgcgacacctcgctgaaggtgccgcacggtgaatccggcaaggtcatc
ggcatccgcgtgttctctcgcgaggacgacgacgagctgcccgccggcgtcaacgagctg
gtccgcgtgtacgtggcccagaagcgcaagatctccgacggcgacaagctcgccggacgc
cacggcaacaagggcgtcatcggcaagatcctgcccgtcgaggacatgccgttcctgccc
gatggcaccccggtggacatcatcctgaacacccacggtgtgccgcgtcgtatgaacatc
ggccagatcctggaaacccacctcgggtgggtggccaaggccggctggaacatcgacgtc
gccgcggggactccggagtgggcgagcaagctgcccgagcagctgtactcggccccggtc
gacagcatcgtgagcaccccggtgttcgacggtgcccgcgaagaggagctggccggtctg
ctcggctcgacgctgcccaaccgtgacggcgacgtcatggtcgacagcgacggcaaggcg
accctgttcgacggccgcagtggcgaaccgttcccgtaccccgtgacggtcggctacatg
tacatgctgaagctgcaccacctggtggacgacaagatccacgcccgctccaccggtccg
tactcgatgatcacccagcagccgctcggtggtaaggcgcagttcggtggccagcgattc
ggtgagatggaatgttgggccatgcaggcctacggcgccgcctacaccctgcaggagctg
ctgaccatcaagtccgacgacaccgtcggccgggtcaaggtgtacgaggccatcgtcaag
ggcgagaacatccccgaacccggtatcccggagtcgttcaaggtgcttctcaaggagctg
cagtcgctgtgcctcaatgtcgaggtcctgtcttctgacggagccgcgatcgagatgcgt
gacggtgacgacgaggacctggagcgcgctgccgcgaacctgggaatcaacctgtcgcgc
aacgagtccgcttcagtcgaagacctcgcctaa
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