Methanobacterium formicicum DSM1535: DSM1535_0546
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Entry
DSM1535_0546 CDS
T03743
Symbol
rfcS
Name
(GenBank) Replication factor C small subunit
KO
K04801
replication factor C small subunit
Organism
mfi
Methanobacterium formicicum DSM1535
Pathway
mfi03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
mfi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DSM1535_0546 (rfcS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfi03032
]
DSM1535_0546 (rfcS)
DNA replication proteins [BR:
mfi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
RFC (replication factor C)
DSM1535_0546 (rfcS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RuvB_N
AAA_14
IstB_IS21
AAA_2
Mg_chelatase
AAA_16
DNA_pol3_delta
AAA_assoc_2
AAA_5
ResIII
AAA_24
AAA_22
AAA_18
nSTAND3
SRP54
DSBA
RNA_helicase
AAA_7
PhoH
AAA_3
DUF815
Sigma54_activ_2
AAA_28
T2SSE
DUF3400
CbiA
Spherulin4
TniB
AAA_30
AAA_25
NB-ARC
AAA_31
RsgA_GTPase
TsaE
AAA_29
Motif
Other DBs
NCBI-ProteinID:
CEA12907
UniProt:
A0A089ZGS2
LinkDB
All DBs
Position
554665..555630
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AA seq
321 aa
AA seq
DB search
MNGPWVEKYRPQNLDEVVGQEHIIQRLKQYIHEESMPNLMFTGPAGVGKTTTAIALAKAM
LGEYWKQNFLELNASDARGIETVRKDIKSFCRLKAVGAPFRIIFLDEVDNMTKDAQHALR
REMEMYTKTSSFILSCNYSSKIIDPIQSRCAIFRFAPIKGHQVIQRLEIIAKAENVNYTP
GTLESIVYFAEGDMRRAVNILQSTASMGEEVTEETVHDVVSKAKPKDVRRIVNMALDGDF
MGARDLLREVMVVQGTSGEDMVTQIYQEVSRMAVDDLIASDEYIKLVENIGEYDFRIREG
ANPRIQLEALLTKFLPKEKAD
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaccatgggtggaaaaataccgaccacaaaacctggatgaggttgtgggtcaa
gaacacattatacaaagactcaaacagtacatacacgaagagagcatgcctaacctcatg
ttcactggaccagcaggagtgggaaaaaccaccacggccattgccctggccaaagccatg
ctgggggaatactggaagcagaatttcctggaactgaatgcctctgatgccaggggtatt
gagactgtgcgtaaggatattaagagtttctgtcggttaaaggccgttggcgcacccttc
cgaattattttcctggatgaagtggataacatgaccaaggatgcccagcacgcccttcgc
cgtgagatggagatgtacaccaaaacatcatctttcattctttcctgtaactactcctcc
aagatcattgatcctatccaatcccggtgtgccatattcagattcgcccctatcaaaggt
caccaagttatccagagattggaaataatagctaaggctgaaaacgtaaattacactcct
ggaactctggaaagcattgtctactttgccgagggagatatgcgccgggcagtaaacatc
ctgcagtccaccgcatccatgggcgaagaggtgactgaggaaaccgtccatgatgtggtt
tccaaggccaaaccaaaagatgtgcgtagaatagtgaacatggcactggatggagatttt
atgggtgcccgtgaccttctacgggaggttatggtggttcagggaaccagtggagaagat
atggttactcagatctatcaggaagtctccagaatggcggtagacgaccttattgccagt
gatgaatacatcaaactggtggaaaatattggagaatacgacttccgaataagggaaggg
gccaatccgcgtatacagttggaagctttattaaccaaatttttaccaaaagaaaaggca
gattag
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