Pseudoduganella flava: GO485_03510
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Entry
GO485_03510 CDS
T06346
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mfla
Pseudoduganella flava
Pathway
mfla00040
Pentose and glucuronate interconversions
mfla01100
Metabolic pathways
mfla02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mfla00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
GO485_03510
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GO485_03510
Enzymes [BR:
mfla01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
GO485_03510
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Motif
Pfam:
Pectate_lyase_4
3keto-disac_hyd
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
QGZ38207
UniProt:
A0A562Q1R4
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Position
complement(940646..942448)
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AA seq
600 aa
AA seq
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MRHLALKAALSAALLSTAFLGHTALAVDPAREAAPADGWASQGGGTRGGSAAAADQVYTV
SNRTQLLAAINNGGTNAKIIKLAGIIDMSEGRPYTSSSDQSTRGAVRLKSNTTMIGTGAN
TGFVNGHIVVSGISQVILRNFKIVNPCDVGPVWDPDDGSTGNWNSAFDGIGVTGSDHVWV
DHVTFTDAPKTDDQLPVENGHVKQCHDGALDITKASDYVTVSYNVFELHNKNTLVGGSDS
ATGDEGKLRITFNNNLYRDVASRAPRVRFGQVHVFNNYFTGSRSHQTYPVSYSIGVGKAA
KILSNNNVFEIAGAQSCPDVVEDFGSGAFKDNGSQLNGNSLGACGVSSSVSWTPPYASSP
RATSLVKDHVLAQAGAGKLTTSVGGDGNTDPDPAPSLGCTATGLYFCDDFEGGGTAQWDL
LPVAGANGGFRVQDDAADSANQVLQYTAASTGGVLALVKDSALANVPSGDYYVEARIRPM
TNSTTANKLLYLVTRYKDASNWYGAGLNVQSSTSSTKVEIAKMQAGTLSRPKQVARPIAM
DGPFYTVRFELKGSTVTVYLDGEQLGAITDSAFTARGRIGLYSANKSFQIDDVKVGAPAN
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgcgacatcttgcattgaaggcggcgctgtccgccgcgttactgtccaccgcattcctc
ggccacacggcgttggctgtcgacccggcccgcgaggcagcgccggcggacggctgggcg
agccagggcggcggcacgcgcggcggctcggcggccgcggccgaccaggtctacacggtc
agcaatcgcacccagctgctcgccgccatcaacaacggcggtaccaacgcgaagatcatc
aagctggccggcatcatcgacatgagcgaagggcggccttacacgagcagctcggaccag
tccacccgcggcgccgtgcgcctgaagagcaatacgacgatgatcggcactggcgccaac
acgggcttcgtcaacggccacatcgtcgtctccggtatctcgcaggtgatcctcaggaac
ttcaagatcgtcaatccatgcgacgtgggccctgtgtgggatccggacgacggctccacc
ggcaactggaattcggcgttcgacgggatcggcgtcaccggctcggatcacgtgtgggtc
gaccacgtgacgttcaccgatgcgccgaagacggacgaccagctgcccgtcgagaacggc
cacgtcaagcaatgccatgacggcgcgctggacatcacgaaggcgtcggactatgtgacc
gtgtcgtacaacgtgttcgagctgcacaacaagaacacgctggtcggcggcagcgacagc
gccacgggcgacgagggcaagctgcgcatcacgttcaacaacaacctgtaccgcgacgtg
gcgagccgcgcaccgcgcgtgcgcttcggccaggtccacgtgttcaacaactacttcacg
ggctcgcggtcgcaccagacctacccggtcagctacagcatcggcgtgggcaaggcggcc
aagatcctgtcgaacaacaacgtgttcgagatcgcgggcgcgcagtcctgcccggacgtc
gtcgaggacttcggctccggcgcgttcaaggacaacggctcgcagttgaacggcaactcg
ctgggcgcctgcggcgtctcgtcgagtgtcagctggacgccgccttacgcgtccagcccg
cgtgccacgtcgctcgtcaaggaccatgtgctggcgcaggccggtgccggcaagctgacc
acgtccgtcggcggcgacggcaacaccgaccccgatcccgcgccgagcctgggctgtacc
gctacgggcctgtacttctgcgatgacttcgaaggcggcggcaccgcgcaatgggacctg
ctgcccgtggcgggcgcgaacggcggcttccgcgtgcaggacgatgcggccgacagtgcc
aaccaggtgctgcagtacacggccgcgtcgacgggcggcgtgctggcgctggtcaaggac
agcgcgctggccaacgtgccgtcgggcgactactacgtggaagcgcgcatccgcccgatg
accaactccaccaccgccaacaagctgctgtatctggtcacgcgttacaaggatgcgtcc
aactggtatggcgcgggcttgaacgtgcagagcagcacgagcagcacgaaggtcgagatc
gcgaagatgcaggccggtaccctgagccgtccgaaacaggtggccaggccgatcgcgatg
gatggcccgttctacacggtgcgcttcgaactgaagggcagcacggtgaccgtgtacctc
gacggcgaacagctgggcgccatcaccgacagcgctttcaccgcgcgcggccgcatcggc
ctgtactcggccaataaatcgttccagatcgacgacgtgaaggtgggggcaccggccaac
tga
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