Miscanthus floridulus: 136462981
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Entry
136462981 CDS
T10264
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mflo Miscanthus floridulus
Pathway
mflo00040
Pentose and glucuronate interconversions
mflo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
136462981
Enzymes [BR:
mflo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
136462981
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
136462981
NCBI-ProteinID:
XP_066318133
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Position
7:complement(31458782..31460766)
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AA seq
442 aa
AA seq
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METKLRWSRPGSLLVAAAFLASAAVSSANIGDFDGHWQKRKELAEASVRETYRSDPYNVT
NSFNVAVHRASSPRRAMREMPRKHKKSTGPCRATNPIDKCWRCRNDWATDRFRLARCARG
FGHATTGGLGGPIYIVTDPSDGDVVNPRPGTLRWGVIQPGPLWIIFARSMIIQLSQELLV
SSDKTIDGRGAQVHIANGAGITVQLSRNVIIHNLHVHDVVHSMGGLMRDSPTHVGSRTKA
DGDGISLFQATNVWIDHISMSNCEDGLIDVVQSSTGITISNCHFTNHNDVMLFGASDSYP
QDQMMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGGKAPTIISQGNRY
IAPPNIAAKVITKHYAEEGEWKNWVWHTEDDLFMNGAIFEPSGGAVPRKINGNEWVKPKP
GTYVTRLTRFSGTLSCCSGKPC
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggagacgaagctccggtggagccggcccggctcccttctcgtcgccgcggcgttcctg
gcgtccgccgccgtgtcaagcgccaacattggcgactttgacgggcattggcagaagcgc
aaggagctggccgaggcgtcggtgagggagacgtacaggtccgacccgtacaacgtcacc
aacagcttcaacgtcgccgtgcacagagctagcagcccgcggcgtgcgatgcgggagatg
cctcggaagcacaagaagtcgacgggcccgtgccgggcgacgaacccgatcgacaagtgc
tggcgctgccgcaacgactgggcgacggaccgattccgtctggcacggtgcgccaggggg
ttcgggcacgcgaccaccggcggcctcggcggtccgatctacatcgtgaccgaccccagc
gacggcgacgtggtgaacccgcgccccggcacgctccggtggggcgtcatccagcctggc
ccgctgtggatcatcttcgccaggtccatgatcatccagctctcgcaggagctgctggtg
agcagcgacaagaccatcgacgggcgcggcgcgcaggtgcacatcgccaacggagccggg
atcacggtgcagctgtctcggaacgtgatcatccacaacctgcacgtgcacgacgtggtg
cactccatgggcgggctgatgcgcgactccccgacgcacgtcgggtcccggaccaaggcc
gacggcgacggcatctcgctcttccaggccaccaacgtgtggatcgaccacatctccatg
tccaactgcgaggacgggctcatcgacgtggtgcagagctccacggggatcaccatctcc
aactgccacttcaccaaccacaacgacgtgatgctgttcggcgccagcgactcgtacccg
caggaccagatgatgcagatcaccgtcgccttcaaccacttcggcagggggctcgtgcag
cggatgcccaggtgccgatgggggttcttccacgtcgtcaacaacgactacacgcactgg
ctcatgtatgccattggcggcggcaaagcgcccaccatcatcagccagggcaaccgatac
attgcaccacccaacatcgccgccaaagtgatcaccaagcactacgcggaagagggcgag
tggaagaactgggtgtggcacacggaggacgacctgttcatgaacggcgccatcttcgag
ccgtccggcggcgcggtgcccaggaagatcaacggcaacgagtgggtcaagcccaagcca
ggcacctacgtcacaaggctcacccgcttctccggcacattgtcctgctgctcaggaaag
ccgtgctga
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