Miscanthus floridulus: 136492856
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Entry
136492856 CDS
T10264
Name
(RefSeq) transportin-1-like
KO
K18752
transportin-1
Organism
mflo Miscanthus floridulus
Pathway
mflo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136492856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136492856
03009 Ribosome biogenesis [BR:
mflo03009
]
136492856
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
136492856
Ribosome biogenesis [BR:
mflo03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
136492856
Pre-60S particles
136492856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IPO5
IBN_N
TPR_IMB1
TPR_DNAAF5
HEAT_2
TOR1L1_N
HEAT_MROH2B_C
PDS5
CLASP_N
CEP104-like_TOG
INTS7_N
UTP20_N
Ltn1_1st
Motif
Other DBs
NCBI-GeneID:
136492856
NCBI-ProteinID:
XP_066345008
LinkDB
All DBs
Position
11:101165087..101176807
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AA seq
890 aa
AA seq
DB search
MAAPAIWQPQEQGLHEICTLLEAHISPNSDQARIWQQLQQYSQFPDFNNYLVFILARGEG
KSIEVRQAAGLLLKNNLRTTFSSMPPPFQHYVRSELLPCIGATNRAIRSTVGTVISVLFQ
IVRVAGWIELFQALHKCLDSNDLDHMEGAMDAIYKICEDVPEELDVDVPGLSERPINVFM
PRILQFFQSPHATLRKLSLGCVNQYIVVMPSALYMSMDQYIQGLFNLAKDPSADVRKLVC
SAWVQLIEVRPSILEPHLKNVTELILQANKDSDDEVALEACEFWSAYCDVSMPPEGLREF
LPRLIPTLLSNMVYADDDESLDDAEEDESFPDRDQDLKPRFHASRLHGSETGDDDDDDDA
VNVWNLRKCSAAGLDVLSNVFGDSILPTLMPLIEQNLARTDDDSWKERETAVLCLGAIAE
GCISGLYPHLPQIVVFLIPLLDDKFPLIRSITCWTLSRYSKFIVQSLDHPNGREQFDKIL
MGLLRRILDTNKRVQEAACSAFATLEEEASEELVPHLEVILQHLMCAYGKYQRRNFRILY
DALGTLADAVGAELNQAKYLDIFMPPLIMKWQQLSNSDKDLFPLLECFTSIAQALGPGFA
QFAEPVFQRCINLIQSQQLAKIDPTAAGAVYDREFIVCSLDLLSGLAEGLGAGIESLVAQ
SSLRDLLLQCCMDEAADVRQSALALLGDLSRVCPIHLHPRLQEFLTVAAKQLNPQSVKDA
VSVANNACWAIGELAIKIGKEIAPVVITVVSCLVPILKSPEGLNKSLIENSAITLGRLSW
VCPDIVAPHMEHFMQAWCNALCIIRDDFEKEDAFHGLCAMVAANPTGAAGSLAYICQACA
SWTEIKSEGLHNEVCQILNGYKQLLGNGGWEQCMATLQPDVVQKLARYGV
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccggcgatatggcagccgcaggagcaggggctccacgagatctgcaccctc
ctggaggcgcacatctcccccaactccgaccaggcccgcatctggcagcagctccagcag
tacagccagttcccggacttcaacaactacctagtcttcatcctggcccgcggagagggg
aaatctattgaagttagacaggcagctggtctactactgaaaaacaatttgcgaacgact
ttcagttccatgccacctccgttccagcattatgttaggtctgagctgttaccatgtata
ggggcaaccaatagggcaattagatccacagttggaacagtgatcagtgtacttttccaa
attgtacgagttgctggatggattgagttgtttcaggcactccataagtgtttggatagt
aatgacctggatcacatggaaggtgctatggatgcgatatacaagatctgtgaggatgtc
cctgaagagctcgatgttgatgttcctggtttgtctgaacgaccgatcaatgtgtttatg
ccgagaatactgcagtttttccagtcaccacatgctactttgagaaaactatcgttgggt
tgcgtaaatcagtacatagtagtgatgccatcggcactctacatgtctatggatcagtat
attcagggattattcaaccttgcaaaggacccttcagcagatgttcggaaactggtttgt
tcagcctgggttcagctcattgaagttcgcccatcaattctggagccacatcttaaaaat
gttactgaattgatcttgcaagctaataaagattcagatgatgaagtcgccctagaagct
tgcgagttctggtctgcatactgtgatgtgagtatgccacctgaaggtttacgggagttc
ttgccacgcttaatcccgactttgttgtcgaacatggtatatgcggatgatgatgagtct
cttgatgatgctgaggaagatgaatcctttccagacagggaccaggatttgaagccccgc
ttccatgcctctcgattgcatggatcagaaactggagatgacgatgatgatgatgatgct
gtaaatgtctggaacctgcggaagtgtagtgctgctgggttggatgttctctctaatgtg
tttggtgacagcatccttccaactttaatgccattgattgagcaaaacttggctcgaaca
gatgatgattcttggaaggagagggaaactgctgttttgtgtctaggcgctatagcagag
gggtgcattagtggtctatacccgcaccttcctcagattgttgtcttcctaatccccctt
cttgatgataaatttcctcttatacggagtattacatgttggacgctctctcgatacagc
aaattcattgttcagagccttgatcatccaaatggacgtgaacaatttgataagattctc
atgggattgctcagaaggatattggatactaacaaaagagtgcaagaggctgcttgttca
gcgtttgctactcttgaagaggaagcttccgaagaattagtaccccacctggaagtaatt
ttgcagcacctcatgtgtgcctatggaaaataccagagacgaaatttccggatactctat
gacgcccttggtaccctggctgatgctgttggagcagaattaaatcaggcgaaatatcta
gatatatttatgccacctttaatcatgaagtggcagcaactttccaactctgacaaagat
ctatttccactccttgaatgctttacatctattgcacaggcattgggaccaggatttgct
cagtttgcggaaccagtgtttcaaaggtgcatcaatcttatccaatcgcaacagttggca
aagattgatcctactgcagctggtgcggtgtatgatagagaattcattgtttgttcgttg
gacctactgtcaggacttgcagaaggtcttggcgctggtattgaaagtcttgttgcacag
agcagtttgagagatctacttttgcaatgctgcatggatgaagcagctgatgttcgacaa
agtgcccttgcccttcttggagacctttctagggtttgcccaatacatttgcatccacgc
cttcaagaatttcttactgttgcagcaaagcaactgaatcctcagtctgtgaaggatgcg
gtatcagtagctaacaatgcctgttgggctattggagaattagcaatcaagattggcaaa
gaaattgcacctgtggtgatcactgttgtttcttgcttggttcccattctaaaatcccca
gagggtttgaacaagtcacttattgaaaatagtgcgatcactcttgggaggcttagctgg
gtctgtccagacattgtggcccctcatatggaacatttcatgcaagcatggtgcaatgcc
ttgtgcatcatcagagacgattttgagaaagaggatgcttttcatggactgtgtgcaatg
gtggcggcaaaccctacaggagccgctggttcattagcttacatctgccaggcctgtgca
agttggactgagataaaaagtgaaggtcttcacaatgaagtgtgccagattctgaatggc
tacaagcagctgcttggaaacggtgggtgggaacaatgcatggccaccctgcaaccagat
gttgtgcagaaattagctagatatggagtatga
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