KEGG   Miscanthus floridulus: 136493077
Entry
136493077         CDS       T10264                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
mflo  Miscanthus floridulus
Pathway
mflo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mflo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    136493077
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mflo03041]
    136493077
Spliceosome [BR:mflo03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    136493077
 Complex B
    136493077
 Complex C
   U2 SnRNP specific factors
    136493077
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Desulfoferrod_N
Other DBs
NCBI-GeneID: 136493077
NCBI-ProteinID: XP_066345213
LinkDB
Position
11:50448023..50456886
AA seq 504 aa
MASTVLEATRAAHEDLERLERLAVRELQREPANPRDRLFQSHRVRHMLDLVVSTSDKLVE
IYEDKDNARKDEINTHLTAPTQSGLFSKYYERLKEIREYHRRNLSARFVSTTDDYEELLK
EEPVIEFTGEETFGRYLDLHELYNEFINSKFGTLMEYSAYVGCFSQTDKISPSHKATRQY
REYLEHVLEYLTSFLYRTEPLQDIEKIFLKLESEFEERWANGEIPGWGNKDTEKESEIDL
DYYSTVEELVELGPEKLKQALAARGLKSGGTVQQRAERLFLLKHTPLEQLDRKHFAKVPC
TKDGSNTTSNGSNVKDDMKKEIALMEVKMRRLCELLDEAFVRTKENAEKKLTLTYEEMEA
EREEEEVQADTESDDEEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNHSYW
GRRAYERHFKEWRHQHGMRCLGIPNTKNFNEITSIDEAKVLWEKIQARQGVNKWRPDLEE
EYEDQEGNIYNKKTYTDLQRQGLI
NT seq 1515 nt   +upstreamnt  +downstreamnt
atggcgtcgacggtgctggaggcgacgcgggcggcgcatgaggacctggagaggctggag
cggctcgcggtacgcgaactgcagcgggagcccgccaacccgcgcgaccgcctctttcag
tcccaccgcgtccgccacatgctcgacctcgtcgtctccacctctgacaagctcgtggag
atctatgaagacaaggacaatgctaggaaggatgagatcaacacccatcttactgcgccc
acgcaaagtggactgtttagcaagtactatgaaaggctcaaagagatccgtgaatatcat
cggcggaacctatctgcccgttttgtcagtacaactgatgactatgaagagcttttaaag
gaggaaccagttattgaattcactggcgaggaaacttttggccgttacctagacttgcat
gagctttataatgagttcataaattccaagtttggaacgctgatggaatactcggcttat
gttggctgtttctcccagacagacaagatctcacctagtcataaggctaccagacaatac
agagaatacttggaacacgttttggaatatctgacatcatttctgtatcgcacagagcca
ttgcaagacattgagaagatttttctaaagctggagagtgaatttgaggaacgatgggcc
aatggagaaatacctggatggggaaataaagacacagaaaaagaatctgaaatagatctt
gattactacagcacagttgaagaacttgttgagcttggcccagaaaagttaaaacaggct
ttagctgctcgtggtttgaagagtggtggtactgttcaacagcgcgcggagcggcttttc
ttgcttaagcatacgccgttggaacaactagataggaagcattttgccaaagttccatgt
actaaagatggctcaaacacaacttccaatggcagcaatgttaaggatgatatgaagaag
gaaatcgcattgatggaagtaaagatgaggcgcctttgtgagctgctagatgaggccttt
gtaaggacaaaggaaaatgcggagaagaagcttacactgacgtatgaagagatggaagca
gaacgggaggaggaggaggtacaagctgacactgagagtgatgatgaagaacaacaaatc
tacaatcctctcaagttgccaatgggttgggatggcaagcctatcccctattggctatac
aagctacatggccttgggcaggaattcaagtgtgagatatgtggaaaccatagctattgg
gggcgaagggcttatgagcgtcatttcaaggaatggcgtcatcagcatgggatgcgatgc
cttggcattcctaatactaagaatttcaatgaaatcacatccattgatgaggcgaaagtg
ctctgggagaaaattcaagcacgacaaggagtgaacaagtggcggccagacctagaagaa
gagtacgaagatcaggaaggcaacatctacaacaagaagacctacactgacctgcagcgt
caaggcctgatctaa

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