Miscanthus floridulus: 136493449
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Entry
136493449 CDS
T10264
Name
(RefSeq) LOW QUALITY PROTEIN: pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mflo03036
]
136493449
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
136493449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_22
AAA_16
AAA_18
nSTAND3
Cytidylate_kin
AAA_14
AAA_5
NPHP3_N
AAA_30
Viral_helicase1
NACHT
AAA_28
RuvB_N
AAA_2
RNA_helicase
ATPase_2
TIP49
TsaE
Rad17
DUF815
AAA_11
ABC_tran
AAA_17
AAA_24
AAA_33
AAA_7
bpMoxR
nSTAND1
IstB_IS21
nSTAND6
AAA_19
AAA_3
PduV-EutP
SLFN-g3_helicase
Cytidylate_kin2
KAP_NTPase
SRPRB
NB-ARC
Sigma54_activat
DnaB_C
Mg_chelatase
AAA_13
NTPase_1
SKI
ResIII
Motif
Other DBs
NCBI-GeneID:
136493449
NCBI-ProteinID:
XP_066345631
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Position
11:55528663..55533954
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AA seq
488 aa
AA seq
DB search
MSAPMEISFSFSAPPPPPPPDAACAATAAPLLAPAAPQVLPPPVAAVSSSPPQQQAAVAA
AVVAPSPADDKVLVSVEVLLHAASAARHEDVQVAVERMLEARSLSYVDGPVPIPADNSFL
LENVKRIRICDTDEWAENHKVLLFWQVKPVVHVFQLSEDGPGEEPSEDDTLSSFNEWALP
AKEFDGLWESLLYEVGLKQRLLRYAASALLFTERGVDTCLVSWNRIVLLHGPPGTGKTSL
CKALAQKLSIRFKSRYSMCQLIEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEESNLVF
VLIDEVESLAAARQAAISGSEPSDSIRVVNALLTQMDKLKSWPNVIILTTSNITTAIDIA
FVDRADIKAYVGPPMLQARYEILRSCIQELLRVGILTYPQGSSVPCILNYSTLKEKKHCP
EAADPGAFQLSSLLYEAAKLCEGLSGRSLRKLPFLAHASVTNPSCCDASTFLHTLIKTAQ
REVLESRG
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcccctatggagatctccttctccttctccgcacccccaccccctccccctccg
gatgccgcgtgtgccgccaccgctgccccgttgctggcacctgccgccccccaggtgctg
ccgccccctgtcgccgcggtctcctcctcgccgccgcagcagcaggcggctgtggctgcg
gccgtggttgctccttccccggccgacgacaaggtcctcgtgtcagttgaggtactgttg
cacgccgcgagcgcggctcgccacgaggacgtccaggtggcggtagagaggatgctagaa
gctcgaagcttaagctatgttgatgggcctgtgccaattcctgctgataattcttttctt
cttgaaaatgtcaaaaggatacgaatatgtgacactgatgagtgggctgagaatcacaaa
gttctcttattttggcaagttaagcctgttgtgcacgtgttccagctgagtgaagatggt
cctggtgaggaaccaagcgaggatgatacgctctctagctttaacgagtgggccttacct
gccaaagaatttgatggtttgtgggaaagtttactatatgaagttggtctcaagcagagg
ttgctgagatatgctgccagtgctttgctttttactgaaaggggtgtggatacatgtctg
gtttcatggaaccggattgtacttttgcatggtccgcctggaacaggaaagacttccttg
tgtaaagcactagcacagaaactttccattcgcttcaagtcaaggtattctatgtgtcaa
ttgattgaagtgaatgctcattcgttgttcagcaagtggttttctgaaagtggaaaattg
gttgccaaacttttccagaagatccaggagatggtggaggaagaaagcaacctggtattt
gtattgatagatgaagttgaaagccttgctgctgccagacaagctgccatatctggctct
gaaccttcagactccattagagttgtgaatgcgctgctaacacaaatggacaaactgaag
tcttggccaaatgttatcattttaacaacatcaaatatcactacagcaatagatattgca
tttgttgacagggcagacattaaggcatatgttggaccccctatgcttcaagcacgatac
gagatcttgaggtcatgcatacaggagctcttaagagttggcattcttacatatcctcag
ggtagtagtgtgccgtgtattctgaactattcgaccctgaaggagaagaagcactgtcct
gaggctgcagaccctggtgcgtttcagttatccagtctactctatgaagccgcaaaactg
tgtgagggacttagtggccggtcattgaggaaactccctttcctggcacatgcctctgtc
accaacccttcatgctgcgatgcttctactttcttgcatacattgataaagactgcgcaa
agagaggtcttggagtcacgtggttag
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