KEGG   Miscanthus floridulus: 136496614
Entry
136496614         CDS       T10264                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
mflo  Miscanthus floridulus
Pathway
mflo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mflo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    136496614
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mflo03041]
    136496614
Spliceosome [BR:mflo03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    136496614
 Complex B
    136496614
 Complex C
   U2 SnRNP specific factors
    136496614
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Desulfoferrod_N
Other DBs
NCBI-GeneID: 136496614
NCBI-ProteinID: XP_066348435
LinkDB
Position
12:49782532..49791793
AA seq 504 aa
MASTVLEATRAAHEDLERLERLAVRELQREPANPRDRLFQSHRVRHMLDLVVSTSDKLVE
IYEDKDNARKDEINTHLTAPTQSGLFSKYYERLKEIREYHRRNLSARFVSTTDDYEELLK
EEPVIEFTGEETFGRYLDLHELYNEFINSKFGKPMEYSAYVGCFSQTDNISHSHKATRQY
REYLEHILEYLTSFLYRTEPLQDIEKIFLKLESEFEERWANGEIPGWGNKGTEKESEIDL
DYYSTVEELVELGPEKLKQALAARGLKSGGTVQQRAERLFLLKHTPLEQLDRKHFAKILR
TKDGSDTTSNGNNVKDDMKKEIALMEVKMRRLCELLDEAFVRTKENAEKKLTLTYEEMEA
EREEEEVQADTESDDEEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNHSYW
GRRAYERHFKEWRHQHGMRCLGIPNTKNFNEITSIDEAKALWEKIQARQGVNKWRPDLEE
EYEDQEGNIYNKKTYTDLQRQGLI
NT seq 1515 nt   +upstreamnt  +downstreamnt
atggcgtcgacggtgctggaggcgacgcgggcggcgcatgaggacctggagaggctggag
cggctcgcggtgcgcgaactgcagcgggagcccgccaacccgcgcgaccgcctctttcag
tcccaccgcgtccgccacatgctcgacctcgtcgtctccacctccgacaagctcgtggag
atctatgaagacaaggacaatgctaggaaggatgagatcaacacccatcttactgcgccc
acgcaaagtggactgtttagcaagtactatgaaaggctcaaagagatccgtgaatatcat
cggcggaacctatctgcccgttttgtcagtacaactgatgactatgaagagcttttaaag
gaggaaccagttattgagttcactggcgaggaaacttttggccgttacctagatttgcat
gagctttataatgagttcataaattccaagtttggaaagcctatggaatactcggcttat
gttggctgtttctcccagacggacaacatctcacatagtcataaggctaccagacaatac
agagaatacttggaacacattttggaatatctgacatcatttctgtaccgcacagagcca
ttgcaagacattgagaagatttttctaaagctggagagtgaatttgaggaacgatgggct
aatggagaaatacctggatggggaaataaaggcacagaaaaagaatctgaaatagatctt
gattactacagcacagttgaagaacttgttgagcttggcccagaaaagttaaaacaggct
ttagctgctcgtggtttgaagagtggtggcactgttcaacagcgtgcggagcggcttttc
ttgctgaagcatacaccattggaacaactggataggaagcattttgccaaaattctacgt
actaaagatggctcagacacaacttctaatggcaacaatgttaaggatgatatgaagaag
gaaatcgcattgatggaagtaaagatgaggcgcctttgtgagctgctagatgaggccttt
gtaaggacaaaggaaaatgcggagaagaagcttacactgacgtatgaagagatggaagca
gaacgggaggaggaggaggtacaagctgacaccgagagtgatgatgaagaacaacaaatc
tacaatcctctcaagttgccaatgggttgggatggcaagcctatcccctattggctgtac
aagctacatggccttggacaggaattcaagtgtgagatatgtggaaaccatagctattgg
gggcgaagggcttatgagcgtcatttcaaggaatggcgccatcaacatgggatgcgatgc
cttggcattcctaatactaagaatttcaatgaaatcacatccattgatgaggcgaaagct
ctctgggagaaaattcaagcacgacaaggagtgaacaagtggcggccagacctagaagaa
gagtacgaagatcaggaaggcaacatctacaacaagaagacctacactgacctgcagcgt
caaggcctgatctaa

DBGET integrated database retrieval system