Miscanthus floridulus: 136547548
Help
Entry
136547548 CDS
T10264
Name
(RefSeq) SNF2 domain-containing protein CLASSY 1-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
mflo Miscanthus floridulus
Pathway
mflo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
136547548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mflo03400
]
136547548
DNA repair and recombination proteins [BR:
mflo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
136547548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SAWADEE
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
136547548
NCBI-ProteinID:
XP_066395589
LinkDB
All DBs
Position
3:complement(151098893..151104861)
Genome browser
AA seq
1230 aa
AA seq
DB search
MVKGSTGHHNNPISSVPFEAFHNGSWHGVNSVRIRDGALLVKFVSSGSTVQHDIDGSYLR
IRSRKATCSDCSHVLKPGADVCVWQATYRGETKDSVPLCRDARLIKIKRNHQLDRCLCLF
AVIFYKDQCPGSKEKVISGTIADVVTIDDICILQNLLSEELQDGSVQWNSAVDCFHHNRS
KLLNARFSLEVAYLIVLSSLRGMEFNIKLVNGNIIYQIIKGDQARYSIDSMSIPPGFGKN
MDIISFKPRDEAFRPIIRTVPITQVKEDNLTEDGCIAVKGESDSAQDVEVLYAHVDIRRS
KRMKTQPDRFTSYDTPNFNRTYNKKEADGPSTKNENSESDLSCDSSEQRESSDEEVLGNP
GVNKKVSGSFVVKEDPRSMKGQQKYPVKRNQCFFPIKEKQISMETKKNTTDQGCSDSHIP
HTPAKNIEKCNRPTFRLKSFASSQSLDGNREPAFCQKRGRKRKKHMCQREYKRMIDQCIG
NIQCEVERDSDFKVDAQILNGCGHAYQEEDFTWPSSADSQEEKDELEELWKEMDYALATV
AIHEQKQMTDSEASHESNTDLGKRGEHCHHDCMLDEQLGLTCRLCNVVCTEAKDIFPPMF
TGKDHERPEWSHFGQDDHVLDLSFFEICAPESSKIKESGNVWASITDLEPKLLAHQRKAF
EFIWKNLAGSLQFEEMDDSTSKGGCVVAHTPGAGKTLLLISFLVSYLKGHPRSRPLVLTP
KAAIHTWRREFQKWGILLPLHVLHHSNRTSKLMGGLSSKLQAVLKNFHRPSWKTMRIMDC
LDKLCKWHEEPSILLMTYSSFLSLAKEDSKLHHQAFITKVLMNNPGLLILDEGHNPRSNK
SKVRKLLMKVKTEFRILLSGTVFQNNFEEYFNTLSLARPRFVNDVMTALVPESEKKTRNR
TGKHQEALARRIFVERVGQKIESSSKHDRMDGISLLNDLTHGFIDSFEGTKLNILPGIRV
YTLFMKPTDVQEEVLAKLPMPLSGNVRYCLEIELLITIASIHPWLINTTRCASTYFTPAE
VARVEKYKWNFAVGCKAKFVIDLLHKSSFRGERVLIFCHNVAPITFLVKLIEIVFGWRLG
QEILVLQGDQELPVRSDVMDKFNSDREGKRKVLIASTTACAEGISLTGASRLVMLDSEWN
HSKTRQAIARAFRPGQERMVFVYLLVASGTWEEDKYNSNRRKAWIAKMVFFGRYFDDPLQ
NRVTEIDDEVLKELADEDETNTFHMIVKQD
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagggatctacaggccaccacaacaaccccatcagttcagtcccgttcgaggcg
tttcataacggatcatggcatggagtgaattctgtaaggatacgggatggtgctttgctt
gtaaaatttgtctcctctggatccacagtccagcatgatattgatgggtcctatctgcgc
atacgttctagaaaggcaacttgctctgattgctcacatgttctcaagccaggcgctgat
gtctgtgtctggcaagcgacttacagaggagaaacaaaagattctgtaccattgtgccgt
gatgcaaggctcatcaaaatcaagagaaatcatcaattggatcggtgcctctgcttgttt
gccgttattttctataaagaccagtgcccgggcagcaaagaaaaagtgatatctggtaca
atagctgacgtagtgacgatagacgatatttgcatcttgcaaaatctcctatctgaggag
ctccaggacggaagcgtgcaatggaattctgcagtggactgcttccaccataatagaagc
aagctgctaaatgctagattctccctagaagtcgcatacctgatagttttgtctagcctg
aggggaatggaattcaacatcaagctggtcaacggcaatatcatttatcagatcatcaaa
ggagaccaagcacggtatagtattgattccatgagcatacctccaggttttgggaagaac
atggacataatatcattcaaaccacgtgatgaggcttttcgcccaattatcagaacagtt
ccaatcactcaggttaaagaagacaatctcacagaagatgggtgtatcgctgtgaagggc
gaatctgatagtgcacaagatgttgaagttttgtatgcgcatgtggacataagacgctca
aagcgtatgaaaactcaaccagaccgctttactagttatgatacgcctaatttcaatcgg
acctacaacaagaaagaagcagatggaccatctactaagaatgaaaattcagagagcgac
ttgagttgtgattcatcagagcagagagaatcaagtgatgaagaggtcttaggaaatcct
ggggtgaacaaaaaagtttctgggtctttcgtggtcaaggaagacccaaggtctatgaaa
ggacaacagaagtacccagtgaaaagaaatcagtgcttttttcctataaaagaaaagcaa
atctccatggaaacaaagaagaacacaacagatcaagggtgttcagattctcacattcca
catacgcctgcaaagaatatagagaagtgcaatcgtccgacatttcgactaaagtcattt
gcttcgtctcaaagcctagatggcaatagagaaccagcattctgccaaaagaggggtagg
aaaagaaagaaacacatgtgccaaagagagtacaaacgaatgatagaccaatgcattgga
aatatccagtgtgaagtggagagggattctgactttaaggttgatgcccagatattgaat
ggctgtggacatgcttaccaagaagaggattttacatggccgtcttccgctgatagtcaa
gaggagaaggatgagcttgaagagttgtggaaagaaatggactatgcactggccacagta
gcaattcatgagcaaaagcagatgacagattcagaagccagtcatgagagcaatactgat
ttaggaaaaagaggagaacactgtcatcatgactgcatgctggacgaacagcttggtctg
acctgcaggctgtgcaatgttgtatgcactgaggcaaaggatatctttccaccgatgttc
actggtaaggaccacgagaggcctgaatggagccattttggtcaggatgatcatgtactt
gacctttctttttttgagatttgtgctccagaatcctccaaaattaaggaatctgggaat
gtgtgggcttcaatcactgatcttgaaccaaagctacttgctcatcaaagaaaagccttc
gaatttatatggaaaaacttggcaggatcattacagtttgaagaaatggatgattcaaca
agtaaaggtggttgtgtggttgcacatactccaggagcgggtaaaactctgttgctgatt
tcatttcttgtcagttacttgaaaggtcacccaagaagccgaccattggtccttactcca
aaagctgcaatccatacatggaggagagagtttcagaaatggggcattttgcttccgtta
catgtgcttcaccactctaatagaacaagcaaactgatgggaggtctcagttcgaaactg
caggcggttttaaagaattttcaccgaccatcgtggaaaacaatgcgcatcatggattgt
ctggacaaattatgcaagtggcatgaggaaccaagcattcttctcatgacgtattcttct
ttcttatcgcttgcgaaagaagactcaaaactgcatcaccaggctttcataacgaaagtt
ttgatgaacaaccctgggctattgattcttgatgaagggcacaacccaagaagcaacaaa
tcaaaggtgagaaagctgctgatgaaggtgaagactgaattcagaatactcttgtctggt
acagtctttcagaacaactttgaagagtatttcaacaccttatctttggccagacctcgt
tttgtcaacgatgttatgaccgcgctagttccagaatcagaaaagaaaacacggaacaga
actggcaaacatcaagaagcactggcaaggcgtatttttgtggaaagagtggggcagaag
atcgagtctagcagcaaacatgacagaatggatggcatctccttgttaaatgatcttact
catggattcattgattcatttgaagggacaaaactgaacattcttccaggtatacgtgtg
tatacccttttcatgaaacccactgacgtccaggaagaggtcctggcgaaactgccaatg
cccttgtcaggcaatgtgcgttactgtctcgagattgagctgctcatcacaattgcttct
atccatccttggcttataaacacaaccaggtgtgctagcacttacttcacgccagcagaa
gtagctagagttgagaagtacaagtggaactttgctgttggttgcaaggcaaagtttgtg
attgatcttttgcacaagtcctcattcagaggggagagggttctgatattttgccacaat
gtggccccaataacctttcttgtcaagctgatagagatagtctttggatggcgtcttggg
caggaaatcctggtgctgcaaggagatcaagaactgcctgtgcggtcagatgtcatggat
aaattcaacagtgacagagaagggaagaggaaggtgctgattgcttcgacaacagcctgt
gccgagggtatcagtttgaccggtgcatcaagattggtgatgctggattcggagtggaac
cattcgaagaccaggcaggcaatcgcaagggcattccgacctggccaggagagaatggtg
tttgtctaccttcttgtggcgtctgggacatgggaggaagataaatacaacagtaacagg
aggaaagcttggatcgcgaaaatggtcttctttgggcgttatttcgatgacccattgcaa
aaccgtgtgactgaaatcgatgatgaggttctgaaggagcttgctgatgaagatgagacc
aatactttccatatgatagtgaagcaggactga
DBGET
integrated database retrieval system
