KEGG   Miscanthus floridulus: 136550309
Entry
136550309         CDS       T10264                                 
Name
(RefSeq) COMPASS-like H3K4 histone methylase component WDR5B
  KO
K14963  COMPASS component SWD3
Organism
mflo  Miscanthus floridulus
Pathway
mflo03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:mflo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    136550309
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mflo03036]
    136550309
Chromosome and associated proteins [BR:mflo03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    ATAC complex
     136550309
    NSL complex
     136550309
   HMT complexes
    COMPASS/SET1 complex
     136550309
    COMPASS/SET1 complex (yeast)
     136550309
    MLL-HCF complex
     136550309
    MLL3/MLL4 complex
     136550309
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     136550309
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WDR55 EIF3I WD40_Gbeta Beta-prop_WDR36-Utp21_1st Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR75_1st NBCH_WD40 WD40_MABP1-WDR62_2nd Beta-prop_Aladin WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_WDR41 Beta-prop_WDR19_1st Beta-prop_Vps41 WD40_RFWD3 Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_ACSF4 Beta-prop_IFT140_1st Beta-prop_DCAF12 eIF2A WD40_like WD_LRWD1 Beta-prop_NWD2_C Beta-prop_VPS8 Beta-prop_WDR35_TULP_N Beta-prop_Nup120_160 Beta-prop_NUP159_NUP214 Tricorn_2nd PROPPIN
Other DBs
NCBI-GeneID: 136550309
NCBI-ProteinID: XP_066397939
LinkDB
Position
4:110130454..110133359
AA seq 331 aa
MSQQTAPPPPPPYRPYRQVREATPHSRAVSCVRFSPCGRLLATASLDGTVALLSPSSLAV
IAVLRGHSDGVSDLSWSTESYYLCSASDDRTIRIWDIRPVLAGGAQAAAADPGADRCIRV
LKGHTNFVFSANFNPQTSSQIASGGFDCTVRIWDVKNGRCTRAIEAHSEPVTSVHFIRDG
SIVVSGSHDGSCKIWDAKTGACLKTVIDEKKPAVSFSMFSPNGKFILVAMLDNSLKLCNF
ATGKFLKVYSGHVNRQYCIQSAFSVTNGKYIVSGSEDNCVYIWDLQGRNILQKLDGHTDT
VISVSCHPTENKIASGGLDNDRTVRLWVQDS
NT seq 996 nt   +upstreamnt  +downstreamnt
atgtcgcagcagacggcaccgccgccgccgccgccgtatcggccgtataggcaagtgcgg
gaggcgacgccccacagccgggcggtctcctgcgtgcggttctccccctgcgggcgcctc
ctcgcgacagcgtccctcgacggaacggtcgcgctgctctccccgtcctcgctcgccgta
atcgccgtcctgcgcggccactccgacggcgtctccgacctgtcctggtccacggagtcg
tactacctctgctccgcctccgacgaccgtaccatccgcatctgggacatccggcccgtc
ctcgccggcggcgcccaggctgccgccgccgaccccggcgcagaccgctgcatccgcgtg
ctcaaggggcacaccaacttcgtcttcagcgccaacttcaacccgcagaccagctcgcag
atcgcctccgggggatttgactgtaccgtgcgcatttgggacgtcaagaacggccgatgc
acccgcgccatcgaagcgcactccgagcccgtcacctccgtgcatttcattagggacgga
tccatcgttgtatcaggaagccatgatgggagctgcaagatttgggacgccaagaccggg
gcttgcctcaagacggtcatcgatgaaaagaagcccgcggtgtccttctccatgttctcg
cccaatggcaagtttatcctcgtcgccatgctggataactcactgaagctatgcaatttt
gctaccggcaagttcttgaaggtatacagtggacatgtgaacagacaatactgcatccag
tctgcattttctgttacgaatgggaagtacattgtcagtggatcagaagacaactgcgtg
tatatatgggacctccaagggagaaatattcttcagaaactagacggccatacagacact
gtcatctcggtgtcctgccatccaacagagaacaagattgcttctggtggccttgataat
gataggactgtaagattatgggttcaagatagttga

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