Mycolicibacterium fluoranthenivorans: HZU40_09865
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Entry
HZU40_09865 CDS
T11067
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mflu Mycolicibacterium fluoranthenivorans
Pathway
mflu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mflu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HZU40_09865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mflu03021
]
HZU40_09865
03400 DNA repair and recombination proteins [BR:
mflu03400
]
HZU40_09865
Enzymes [BR:
mflu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HZU40_09865
Transcription machinery [BR:
mflu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HZU40_09865
DNA repair and recombination proteins [BR:
mflu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HZU40_09865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QNJ94535
UniProt:
A0A7G8PJL9
LinkDB
All DBs
Position
1889798..1893751
Genome browser
AA seq
1317 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRNWSFGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITSVDTEMRHNELSTLEAEMVVEKKAVEDQRDADLEARAQKLEAD
LAELEAEGAKSDVRRKVRDGGEREMRQLRDRTQRELDRLDEIWTTFTKLAPKQLIVDEVL
YRELQDRYGEYFTGAMGAESIKKLIESFDIDAEAESLRDTIKNGKGQKKLRALKRLKVVA
AFQMNRNSPMGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGRPLAMPRLDMVTGLFFLTTEIPGDIGEYT
PAATDTPETGVYSSPAEAIMALDRGALSVRAKIKVRLTQQRPPAAVEAELFEDGWKPGEA
WTAETTLGRVLFNELLPKGYPFVNAQMFKKAQASIINDLAERYPMIVVAQTVDKLKDAGF
YWATRSGVTVSMADVLVPPQKQEILERYEGEADSIEKQYQRGKLNHDERNGELVKIWQQA
TEEVGKALEAYYPEDNPIITIVKSGATGNLTQTRTLAGMKGLVTNPKGEYIPRPIKSSFR
EGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVRENDCETERGINVTL
AEKQADGSLVRDQHIETSAYARTLATDAVDADGNVVVARGHDLGDPAIDALLAAGITEVK
VRSVLTCTTGTGVCAMCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGVT
GGADIVGGLPRVQELFEARVPKNRAPIADVTGRVRLEETDKFYKITIVPDDGSEEVVYDK
LTRRQRLKVFKHDDGSERLLSDGDHVTVGQQLMEGAADPHEVLRVQGPREVQIHLVKEVQ
EVYRAQGVSIHDKHIEVIVRQMLRRVTIIDSGATEFLPGSLTERAEFEVENRRVVAEGGE
PAAGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLQGLKENVIIGKLIP
AGTGIARYRDIQVQPTEEARAAAYTIPSYEDQYYSPDFGQSTGAAVPLDDYGYSDYR
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
gtgctagacgtcaacttcttcgatgaactccgtatcggtctcgcgaccgcggacgacatc
cgcaactggtccttcggcgaggtcaagaagccggagaccatcaactaccgcacgctcaag
cccgagaaggacggcctgttctgcgagaagatcttcggaccgactcgcgactgggagtgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgtgagcgctgcggcgtc
gaggtcactcgcgccaaggtgcgtcgtgagcggatgggccacatcgagctggccgcgccc
gtcacgcacatctggtacttcaagggtgttccttcgcgcttgggctacctgctggacctg
gccccgaaggatctggaaaagatcatctacttcgcggcctacgtgatcacctccgtcgac
acggagatgcgccacaacgagctgtccacgctcgaagccgagatggtcgtcgagaagaag
gccgtcgaggatcagcgcgacgccgacctggaggcccgggcgcagaagctcgaagccgac
ctggccgagctggaggccgagggcgccaagtccgacgtgcgccgcaaggtgcgcgacggc
ggcgagcgtgagatgcgccagctgcgcgaccggacccagcgtgagctggaccggctcgac
gagatctggaccaccttcaccaagctggctcccaagcagctcatcgtggacgaggtgctc
taccgcgagctgcaggaccgctacggcgagtacttcaccggcgccatgggcgcggagtcg
atcaagaagctcatcgagagcttcgacatcgacgccgaggccgagtcgctgcgcgacacc
atcaagaacggcaagggccagaagaagcttcgcgccctcaagcgtctgaaggtcgtcgcg
gcgttccagatgaaccgcaactccccgatgggcatggtgctcgacgccgttccggtgatc
ccgccggagctgcgcccgatggttcagctcgacggtggccgcttcgccacctccgacctg
aacgacctgtaccgccgcgtgatcaaccgcaacaaccggctcaagcgactgatcgacctc
ggcgcacccgagatcatcgtcaacaacgagaagcgcatgcttcaggagtcggtggacgcg
ctgttcgacaacggccgtcgtggccggcccgtcacgggtccgggcaaccgtccgctcaag
tcgctgtccgatctgctcaagggcaagcagggccggttccgtcagaacctgctcggtaag
cgcgtcgactactcgggccgttcggtcatcgtcgtcggcccgcagctcaagctgcaccag
tgcggtctgcccaagctgatggcactcgagctgttcaagccgttcgtgatgaagcgtctg
gtcgacctgaaccacgcgcagaacatcaagagcgccaagcgcatggtcgagcgtcagcgt
ccccaggtgtgggatgtcctcgaagaggtcatcgccgagcacccggtgctgctgaaccgt
gcacccaccctgcaccgcctcggtatccaggccttcgagccgcagctggtggaaggcaag
gccatccagctgcacccgctggtctgtgaggcgttcaacgccgacttcgacggtgaccag
atggcagtccacctgccgctgagcgccgaggcacaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctgtcgcccgcgtcgggccgcccgctggccatgccgcgtctggac
atggtgaccgggctgttcttcctgaccaccgagatccccggtgacatcggcgaatacacg
ccggccgccacggacaccccggagaccggtgtgtacagcagcccggccgaggccatcatg
gccctggaccgtggtgcgctgtcggtgcgggccaagatcaaggtgcggctgacgcagcag
cgtccgccggccgcggtcgaggccgagctgttcgaagacggctggaagcccggcgaggcc
tggaccgcggagacgaccctgggtcgcgtgctgttcaacgagttgctgccgaagggctac
cccttcgtcaacgcgcagatgttcaagaaggcccaggcgtcgatcatcaacgatctcgcc
gagcggtacccgatgatcgtcgtcgcgcagaccgtggacaagctcaaggacgccggcttc
tactgggccacccgttcgggtgtcaccgtgtcgatggccgacgtgctggttcccccgcag
aagcaggagatcctggagcgctacgagggcgaggccgactcgatcgagaagcagtaccag
cgcggcaagctcaaccacgacgagcgcaacggcgagctggtgaagatctggcagcaggcc
accgaagaggtcggtaaggcgctggaggcgtactaccccgaggacaacccgatcatcacg
atcgtgaagtccggcgcgacgggcaacctgacccagacccgcaccctggcgggcatgaag
ggtctggtgaccaacccgaagggtgagtacatcccgcgtccgatcaagtcctcgttccgc
gagggcctgaccgtgctggagtacttcatcaacacccacggtgcccgtaagggtctggcc
gacaccgcgctgcgtaccgccgactcgggttacctgacccgtcgtctggtggacgtgtcg
caggacgtcatcgtgcgcgagaacgactgtgagaccgagcgcggtatcaacgtcaccctc
gccgagaagcaggccgacggttccctggtgcgcgatcagcacatcgagacctcggcatac
gcccgcaccctggccaccgacgcggtggatgccgacggcaacgtcgtcgtcgcccgtggc
cacgacctgggtgatccggcgatcgatgccctgctggcagccggtatcaccgaggtgaag
gtccgctccgtgctgacctgcaccaccggtaccggtgtgtgtgccatgtgctacggccgc
tcgatggccaccggcaagctggtcgacatcggcgaggccgtcggtatcgtcgccgcgcag
tccatcggtgagcccggcacgcagctgaccatgcgtaccttccaccagggtggtgtgacc
ggtggcgccgatatcgtcggcggtctgccccgtgtgcaggaactgttcgaggcccgcgtg
ccgaagaaccgtgccccgatcgcggacgtcacgggacgggtccgcctcgaagagacggac
aagttctacaagatcaccatcgttcccgacgacggcagcgaagaggttgtctacgacaag
ctcacccgccgccagcgcctgaaggtgttcaagcacgacgacggctccgagcgcctgctc
tccgacggtgaccacgtcaccgtgggccagcagctcatggagggtgctgccgatccgcac
gaggtgctgcgtgtgcagggcccgcgcgaggtgcagatccacctcgtcaaggaggtccag
gaggtctaccgggcccagggcgtgtcgatccacgacaagcacatcgaggtcatcgtccgg
cagatgctgcgccgcgtcacgatcatcgattcgggtgcgacggagttcctgcccgggtcg
ctgaccgagcgtgccgagttcgaggtcgagaaccgtcgtgtggtggccgagggcggcgag
cccgcggccggacgtccggtgctgatgggtatcaccaaggcgagcctcgccacggattcg
tggctgtcggcggcgtcgttccaggagaccacgcgcgtgctgaccgatgcggcgatcaac
tgccgcagcgacaagctgcagggtctgaaggagaacgtgatcatcggtaagttgatcccg
gccggtacgggcatcgcccgctaccgcgacatccaggttcagccgaccgaagaggcccgc
gctgcggcgtacacgatcccgtcttacgaggatcagtactacagcccggacttcggccag
agcaccggcgctgccgtgccgctggacgattacggttactcggactaccgctag
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