Marinomonas foliarum: JSY38_09275
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Entry
JSY38_09275 CDS
T07165
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
mfoi
Marinomonas foliarum
Brite
KEGG Orthology (KO) [BR:
mfoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfoi03032
]
JSY38_09275 (gyrB)
03400 DNA repair and recombination proteins [BR:
mfoi03400
]
JSY38_09275 (gyrB)
Enzymes [BR:
mfoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
JSY38_09275 (gyrB)
DNA replication proteins [BR:
mfoi03032
]
Prokaryotic type
DNA Topoisomerases
JSY38_09275 (gyrB)
DNA repair and recombination proteins [BR:
mfoi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JSY38_09275 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
HATPase_c
Toprim
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QRV22281
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All DBs
Position
2001331..2003754
Genome browser
AA seq
807 aa
AA seq
DB search
MSENNYEASSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGHCDTI
TVLIHPDESISVSDNGRGIPVDMHEEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVG
VSVVNALSEELTLTIRKNGKVYEQHYKHGVPQAPLAIIGDSDGKGTTVHFKPSADTFTNI
LFYYDILAKRLRELSFLNSGVAIKLKDERSGKEEFFNYEGGLRSFVEHLNTNKTPINDIF
HFICQRDDLEDGIAVEVALQWNEGFQENIYCYTNNIPQRDGGTHLAGFRGALTRTLNNFI
EKEGLAKKQKVATTGDDSREGLTAIVSVKVPDPKFSSQTKDKLVSSEVKTAVEQEMAKRF
SEYLLEKPGEAKIIVNKMIDAARAREAARRARDMTRRKGALDIAGLPGKLADCQEKDPAL
SEIYLVEGDSAGGSAKQGRDRRTQAILPLKGKILNVEKARFDKMLASVEVGTLITALGCG
IGRDEFNADKLRYHSIVIMTDADVDGSHIRTLLLTFFFRQMPEIIERGHIFIAQPPLFKI
KRGKQEQYIKDEAALDQHLIEVALDGAHMHVNEDAPGIQGEHLAKLMRDYIHIEADVERL
SRVYPRDVMGKLLYCKALTQEDLTNEATVMEWVEAIRSQMPQDARTGFRFDFSVEKDEER
KVYLPVVDIMSHGVSNRYRFEGTFFSSPEYKRIVAMSETVEELFGEESYIQRGERRETVR
TISDMKAWLMKEASRGMTVQRYKGLGEMNPEQLWETTMDPDARRMLRVTIDDAVAADQMF
TTLMGDEVEPRRNFIQDNALNVANLDV
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaataattacgaagcgtccagtatcaaggtgctcaaagggctagatgccgta
cgtaaacgcccaggaatgtatatcggcgatacggacgatggcacaggcttgcaccacatg
gtatttgaagtcgtggataactccattgatgaagcccttgctggtcactgtgacacgatt
accgtcttgattcaccctgatgaatctatttccgtgtctgataacggccgtggtattccg
gttgatatgcacgaagaagaaggtgtgtctgctgccgaagttatcatgacggtacttcac
gctggtggtaagtttgacgataactcatataaagtttctggtggtcttcacggtgtaggt
gtttcggttgtaaacgccctatctgaagaactaaccttgacgatccgtaagaacggcaaa
gtttacgagcaacattacaagcatggtgtaccacaagctcctcttgccattatcggagac
tctgacggcaaaggaactacggttcatttcaaaccttctgctgatacctttactaacatc
ttgttttattatgacatcctggccaaacgcctacgtgaattgtcattcttgaactctggc
gttgccatcaaattaaaagacgagcgttctggtaaagaggaattctttaactacgaaggc
ggattgcgttcttttgtggagcatttgaataccaacaaaacgccaatcaacgatattttt
cactttatttgccaacgtgatgacctagaagatggtatcgctgttgaagtggcattgcag
tggaacgaaggcttccaagaaaacatctattgttacactaacaatattcctcagcgcgat
ggcggtactcaccttgcgggtttccgtggtgcgttaacgcgaacgttgaacaactttatt
gaaaaagaaggtcttgcgaaaaagcaaaaagtcgcaacgacaggcgatgacagccgcgaa
ggtttgactgcgatcgtatcggtaaaagtgccggatccgaagttctcttctcagaccaaa
gacaagctcgtatcttctgaagtaaaaacggccgtagaacaagaaatggcgaaacgtttt
tctgagtatttacttgagaaacctggtgaagccaaaatcatcgttaacaaaatgattgat
gcggctcgtgcccgtgaagctgctcgtcgtgctcgtgatatgactcgtcgtaaaggtgcg
ctagacatcgctggcttacctggtaaattggccgattgtcaggaaaaagacccagcgctt
tctgaaatctacctagtggagggtgactcggcaggtggctcggcaaaacaaggtcgtgat
cgtcgtacacaagccattctgcctctgaaaggtaaaatcttgaacgtcgaaaaagcccgt
tttgataaaatgctggcgtctgttgaagtaggcaccctgattacggcattgggttgtggt
atcggccgtgacgaattcaatgccgacaaattgcgttaccacagcatcgttatcatgacc
gatgccgacgtcgatggatcgcacattcgtaccctgctgttgactttctttttccgtcaa
atgccagaaatcatcgaacgtggtcacattttcattgcccaaccaccgttgtttaaaatc
aaacgtggtaagcaagagcaatacatcaaagacgaagcggcattggatcagcatttgatc
gaagtcgctttggatggcgctcatatgcacgtcaacgaagatgctccaggcattcaaggg
gagcacctggcaaaattgatgcgtgactacattcacattgaagccgatgttgagcgtttg
tctcgtgtgtacccaagagatgtaatgggcaaacttctgtactgtaaagcactgacacaa
gaagatttgaccaacgaagcaacggtaatggaatgggttgaagccatccgtagccaaatg
ccacaagacgctcgtactggtttccgttttgatttctctgtagaaaaagatgaagaacgt
aaggtttatttacctgtagtcgacattatgtctcacggtgtgtctaaccgttatcgtttc
gaaggaaccttcttcagttcaccagagtacaaacgtattgttgctatgtccgaaacagtg
gaagaattgttcggcgaagagtcttatattcaacgcggcgaacgtcgtgaaacagtaaga
acgatcagtgacatgaaagcctggttgatgaaagaagcctctcgcggtatgacggtacag
cgctataaaggtctgggtgagatgaaccctgagcaactttgggaaaccaccatggaccca
gatgctcgtcgcatgcttcgcgtgaccatcgacgacgccgttgccgctgaccaaatgttc
actactttgatgggtgacgaagttgaacctcgtcgtaactttatccaagataacgcctta
aacgtagcgaacctagacgtttaa
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