Marvinbryantia formatexigens: NQ534_15495
Help
Entry
NQ534_15495 CDS
T08439
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mfor
Marvinbryantia formatexigens
Pathway
mfor03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mfor00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NQ534_15495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfor03021
]
NQ534_15495
03400 DNA repair and recombination proteins [BR:
mfor03400
]
NQ534_15495
Enzymes [BR:
mfor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NQ534_15495
Transcription machinery [BR:
mfor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NQ534_15495
DNA repair and recombination proteins [BR:
mfor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NQ534_15495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
LCD1
Motif
Other DBs
NCBI-ProteinID:
UWO23834
LinkDB
All DBs
Position
3328656..3332504
Genome browser
AA seq
1282 aa
AA seq
DB search
MEKNRIRPIKNGNSFRMSYSRQKEVLEMPNLIEVQKDSYQWFLDEGLKEVFDDISPIRDY
GEKLSLEFVDFKLCEDDVKYSIEECKERDATYAAPLKVKVRLHNKETDEINEHEIFMGDL
PLMTETGTFVINGAERVIVSQLVRSPGIYYGIAHDKIGKRLFSCTVIPNRGAWLEYETDS
NDIFYVRVDRTRKVPITVLVRALGISTNAEILELFGEEPKIVATLAKDTATNYQEGLLEL
YKKIRPGEPLAVESAESLIMAMFFDPRRYDLAKVGRYKFNKKLLLRNRIAGHVLAEDVID
PSTGEILAEAGTKATRELADTIQNAAVPFVWVQTEERNVKVLSSMMVDITNYVDIDPQEV
GVTELVYYPALKSILEENSDIEDIKEAIRRDIHDLIPKHITKEDILASINYNIHLEYGIG
TDDDIDHLGNRRIRSVGELLQNQYRIGLSRLERVVRERMTTQDLEGISPQSLINIKPVTA
AVKEFFGSSQLSQFMDQNNPLGELTHKRRLSALGPGGLSRDRAGFEVRDVHYSHYGRMCP
IETPEGPNIGLINSLASYARINQYGFIEAPYRVIDKSDPKNPRVTDEVVYMTADEEDNYH
VAQANEALDEEGHFIRKTVSGRYREETQEYDRAMFDYMDVSPKMVFSVATALIPFLQNDD
ANRALMGSNMQRQAVPLLTTEAPVVGTGMETKTAVDSGVCVVAKHAGTVERVTSKDIVIR
TDDGKRDEYHLTKFLRSNQSNCYNQKPIVFKGNRVQEGQVIADGPSTSNGEIALGKNPLI
GFMTWEGYNYEDAVLLSERLVMDDVYTSVHIEEYEAEARDTKLGPEEITRDVPGVGDDAL
KDLDERGIIRVGAEVRAGDILVGKVTPKGETELTAEERLLRAIFGEKAREVRDTSLKVPH
GEYGIVVDAKVFTREAGDELAPGVNQAVRIYIAQKRKISVGDKMAGRHGNKGVVSRVLPV
EDMPFLPNGRPLDIVLNPLGVPSRMNIGQVLEIHLSLAAKALGFNVSTPIFDGANENDIM
DTLDLANDYVNLEWEEFKAKHEEELLPEVLDYLYENRDHRKLWKGVPISRDGKVRLRDGR
TGEYFDSPVTIGHMHYLKLHHLVDDKIHARSTGPYSLITQQPLGGKAQFGGQRFGEMEVW
ALEAYGASYTLQEILTVKSDDIIGRVKTYEAIIKGENIPEPGIPESFKVLLKELQSLGLD
VRVLGENQKEVEIKETVEYGETDIRSVIEGDRGYRRDDDAPLGDYGYSEQELDGDELVDV
EEEPDDDEFYGDFDDSYVDENE
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaacaggatacgtcctatcaaaaacggcaacagtttccggatgagctactcc
aggcagaaagaggtattggagatgccgaacctcatcgaggtacagaaggattcctaccag
tggtttctggacgaagggctgaaggaagttttcgatgacatctcgccgattcgtgactac
ggtgaaaagctgagtctggagtttgtggatttcaagctttgtgaggatgatgtgaagtat
tcgattgaagagtgcaaggaacgggatgcgacgtacgctgcgccgctgaaggtcaaggta
cggcttcacaacaaagagacagatgagattaacgagcacgagatttttatgggagacctg
ccattgatgacggagacgggcacctttgtcatcaacggtgcggagcgtgttattgtcagc
cagcttgtccgctctccgggcatctactatgggatcgcccatgataaaatcggaaaaaga
ctgttttcctgtaccgttattccgaaccgcggtgcatggctggaatatgagacggactcc
aacgacattttctatgtgcgtgtagacagaacgcgaaaggttcccatcaccgttctggtg
cgtgcgctcggcatcagcaccaatgcggagattctggagctgtttggcgaggagccgaag
atcgtggcgacgctggcgaaggatacggcgaccaactaccaggagggtctgctggagctg
tacaaaaagatccgtccgggcgaaccgcttgccgtggagagcgcagagagcctcatcatg
gcgatgttcttcgacccgcgcagatatgacctggcaaaggtcggacgctacaaattcaat
aaaaagctgctgctgcgcaaccgtatcgccggacatgtgctggcggaggatgtaatcgac
ccgtccactggcgagatcctggcggaggcaggcacgaaggcgacgcgcgagctggcggat
accatccagaacgcagccgttccgtttgtgtgggtgcagacggaggagcgcaacgtaaag
gtgctttccagcatgatggtggatatcacaaattatgtggatatcgacccgcaggaggta
ggcgttacggaattagtatattatccggcgctgaaatctatactggaagaaaatagcgat
atcgaggatatcaaagaggcgatccgccgcgatatccacgatctgattccgaagcatatt
acaaaggaagacatccttgcttccattaactataatattcatctggaatacggcatcggt
accgacgatgatatcgaccatcttggaaaccgccgtatccgttccgtcggcgagctgctg
cagaatcagtaccgcatcggtctttccagactggagcgtgttgtccgcgagcgtatgact
acgcaggacctggaggggatttccccgcagtcgctgatcaatatcaagccggtgacggcg
gcggtgaaggaattcttcggttcctcccagctgtcccagttcatggaccagaacaacccg
ctcggcgagctgacgcacaagagacgtctctccgccctgggacctggcggtctgtcacgg
gacagagccggattcgaggtccgcgacgtacattactcccattacggaagaatgtgcccg
attgagacgccggaaggtccgaacatcggtctgatcaactcactggcgtcctacgcaaga
atcaaccagtacggcttcattgaggcgccgtaccgtgtaatcgataaatccgacccgaag
aatccgcgcgtcaccgacgaggtcgtttacatgacggcggacgaagaggataattaccat
gtagcgcaggcgaacgaggcgctggacgaggaaggtcatttcatccgtaagaccgtatcc
ggacgttaccgcgaggagacgcaggagtacgaccgcgcaatgttcgattacatggacgta
tccccgaagatggtgttctccgtcgctacggctctgattccgttcctgcagaacgacgac
gcaaaccgcgcgctgatgggttcgaacatgcagcgtcaggcggtgccgcttctgacgacc
gaagctccggtagttggtaccggtatggaaacaaagaccgcggtcgactccggtgtgtgc
gtggtggcaaaacatgccggtacggtggagcgcgttacttcaaaagatattgttatccgg
acggatgacggaaagcgcgatgagtatcatctcaccaaattcctgcgaagcaaccagagc
aactgctacaaccagaagccgatcgtcttcaagggcaaccgcgtgcaggaggggcaggtt
atcgcagacggaccgtccacctcaaacggtgagattgcgctgggtaaaaacccgctcatc
ggtttcatgacctgggagggttacaactacgaggacgccgtacttttgagcgagcgtctt
gttatggatgacgtttatacttccgttcatattgaagaatatgaggcggaggcgagagat
acaaagctgggaccggaggagattaccagagacgttccgggcgtcggcgacgatgcatta
aaggacctcgacgagagaggtattatccgcgtcggtgcggaggttcgtgcgggcgatatc
ctggtcggcaaggtaacgccgaaaggcgagaccgagctgacggcggaggagcgtctgctg
cgtgcgatcttcggtgagaaagcgcgcgaggtgcgtgacacctccctgaaggtgccgcac
ggtgagtacggtattgtcgtagatgcgaaggtatttacgagagaagcgggcgacgagctg
gctccgggcgtaaaccaggcggtgcgcatttacattgcgcagaagagaaagatttcggtc
ggcgataagatggcgggccgtcacggaaacaagggtgttgtttcccgtgtgcttccggtg
gaggatatgccgttcctgccgaacggacgtccgctggatatcgtgctgaacccgctgggc
gtgccgtcccgtatgaatatcggacaggtgctggaaatccacttaagtcttgctgcaaag
gcacttggctttaacgtttccaccccgatcttcgacggcgcgaacgagaatgatattatg
gatactctggatctggcaaatgattatgtcaatctggagtgggaagaatttaaggcaaag
catgaggaggagctgctgccggaggtgctggattatctctatgagaacagagaccaccgc
aagctctggaagggcgtgccgatttcccgcgacggcaaggtaaggctgcgcgacggaaga
acaggcgaatacttcgacagcccggttacgatcggacacatgcattacctgaagctgcat
catctggtggacgataagatccatgcacgttccaccggtccgtactctctgatcacgcag
cagccgctgggcggtaaagcgcagttcggcggacagcgtttcggagaaatggaggtatgg
gcgctggaggcatacggcgcgtcctatacactgcaggaaattctgacggtgaagtcggac
gacatcatcggacgtgtaaagacctacgaggcaatcatcaagggcgagaacatcccggag
ccgggtattccggagtccttcaaggtgctgttaaaggagctgcagtcccttggtctggat
gtgcgcgtgcttggcgaaaaccagaaggaagtagaaataaaagaaaccgtggaatacgga
gaaacagacatacgttctgtgatagaaggagacagaggctatcggcgtgacgacgacgct
ccgcttggagactacggctacagtgagcaggaattggacggcgatgaactggtagacgtg
gaggaagagccggacgacgatgagttctacggagatttcgacgacagttatgtagacgag
aacgagtaa
DBGET
integrated database retrieval system
