Alexandromys fortis (reed vole): 126488595
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Entry
126488595 CDS
T08493
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126488595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfot03019
]
126488595
Messenger RNA biogenesis [BR:
mfot03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
126488595
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_16
TPR_8
TPR_14
TPR_17
TPR_CcmH_CycH
TPR_12
TPR_11
ARM_TT21_C
TPR_9
Sel1
ARM_TT21_2nd
ANAPC3
TPR_15
Fis1_TPR_C
BTAD
TPR_30
DUF7708
Retrotran_gag_2
TPR_20
Motif
Other DBs
NCBI-GeneID:
126488595
NCBI-ProteinID:
XP_049978124
LinkDB
All DBs
Position
Unknown
AA seq
1563 aa
AA seq
DB search
MSSKEVKTALKSARDAIRNKEYKEALKHCKTVLKQEKNNYNAWVFIGVAAAELEQPDQAQ
GAYKKATELEPEQLLAWQGLASLYEKCDHENAKGDLPGVYQRLLDLYESVDKQKWRDVCR
KLVDLHHQEKRYLEVARTWSKLIKTRQDDGADKQELYELWRKLTQMLAEEIEDQDNETQQ
MLWTAFENALDLADSIPSEEHQGLYQRFLQCLSKFPHETTRLKKACEGMINIYPTVQYPL
EVICLYLIESGSLTDEGQQYCCKLVEMNSKSGPGLIGLGVKALQDKKYEDAVSHLTEGLT
ESPLCIAGWYHLAEAQAKVHRPKEAILSCNQALKNIDDHGAAGGRRHQKNLCLLLKAEAL
LKLSDSASSEEAVRILDQVSDADNTPRLLVLQGQACLNTGAVDKAAKIMEDLQASYPGLA
EVHALEGLIHFSKKDYLQAEACFQRALEKDSEVAEYHYQLGLTYWFIGEETRKDKSKALA
HFLKAARLDTYMGKVFCYLGHYYRHVAGDRSRARGCYRKAFELDGSDAESGAAAVDLSVE
LEDMETALAILTAVTQKASAGAAKWAWLRRGLYHLRAGQHSQAVADLQAALRADPKDCNC
WESLGEAYLSRGGYTTALKSFTRASELNPDSTYSVFKVAAIQQILGRYAEAVAQYQLIFE
KKEDYVPALKGLGECYLMMAKAALADFLDGKAVDYVEKALEYFTRALQHRTDVSCLWKLA
GDACTSLHAVSPSKVCVHILGVLLGQQGGREVLKKDELLHLGGRCYGRALKLMSTSNTWC
DLGINYYRQAQHLAETGNSTDGLTELLEKSVHCLKKAVRLDSSNHLYWNALGVIACHRGI
GNYALAQHCFIKSIQAEQINAAAWTNLGVLYLATENIEQAHEAFKMAQSLDPSYLLCWIG
QALIAETVGSYDTMDLFRHTTELSMHTEGAIGYAYWVCTTLQDKSNRETELYRYNILQMN
AVPAAQGVLCKYVERIQNYAPAFTMLGYLNEHLQLRREAAEAYQRAAALLHPTEDQDTYT
VTVRNWGRLLCSIGEYDRAVQAFELTPLEELEDIIGFALALFMKGRYKESNEAYERALTV
VKSEQDKAHVLTAMAITEYKQGQMDAAKALLFKCSILKEPTIESLQALCALGLAMQDATL
SKAALNELLKHVRHKQDYHRCLLTAAVCALQGRSVAVQRQAAKAVHSNPADPALWSLLSR
AVAQYTQRNAKGGAVAGLVAHILDSNHGKKALLYTALNQLAMGSSSAEDRKNVALKTIQK
AAFLSPDDPAVWAGLMAACHADDKLALVSNTQPKRANLHLAQLSAVSIALKDKDILQNYS
QSLEKWCLSQAVTGLIDTGRISEAESLCTKNLKGNPDQPAVILLLRQVQFKSLLESQKPL
PDAVLEELQKAVMSNSTSVPAWQWLAQVYQSQGMMGAAEMCYRKSLQVASQQCSWSGKLS
SLLKLALLALDVCMANVSGDHWSSLLQEATSEALKVCFSPLAVFLQALLQFNRKMGARET
RRLLERVVYQPGYPNSIVSTARWYLLRHLYAKNDQELIDVLVKNAETHSDKRTLELNEKL
SSQ
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcaaagaagtgaagactgccctgaagagtgcaagggacgcaatcagaaacaaa
gagtacaaagaagctttgaaacattgcaagacagtgctaaaacaagaaaaaaataactat
aatgcctgggtcttcattggtgttgctgcagctgaactagaacagcccgaccaggcccag
ggtgcctataaaaaggctaccgaactagagccagagcagttgcttgcttggcaggggcta
gcaagtttgtatgagaagtgtgatcatgaaaatgctaagggtgatttacctggggtttac
caaaggctgttggatctctatgaaagtgttgacaagcagaagtggcgtgatgtctgtagg
aaactcgtggatctgcatcaccaggaaaagagatacctagaggtggctcggacatggagt
aaactgataaagacacggcaagacgacggggcagacaagcaagagctttacgagctgtgg
agaaaactgactcagatgctcgctgaggagatagaggatcaggataatgaaacccagcag
atgctgtggacggcatttgagaacgcactggacttagcggacagtattcccagtgaagag
caccaagggctctatcagcgtttccttcagtgcttatctaaattccctcatgagacaact
aggttgaagaaggcctgtgaaggaatgataaatatctatcctaccgtacaatatccacta
gaagtgatttgtttatacttgattgagtcagggagtctgacagatgagggacagcagtat
tgttgtaaactagtggaaatgaattcaaaaagtggtccaggcctcattggcttaggcgtt
aaagctttacaagacaagaagtatgaagatgctgttagtcacctaacggaaggcttgaca
gaaagccctctttgcatagccggctggtatcatctagcagaagcccaagccaaagtgcac
agacctaaggaagctattctttcttgcaaccaagcacttaagaacatagatgatcacggt
gcagcaggtggccgtcgtcatcagaagaatctttgtcttcttctgaaagcagaggctttg
ctcaaactctccgatagtgcatcttcagaggaagcagttcgcattctcgatcaggtttca
gatgcagataataccccacgactgctggttcttcaaggccaggcctgtctgaacacaggc
gctgtagacaaggctgcgaagatcatggaagaccttcaagcttcttaccctggcctggcc
gaagtccacgcacttgagggcttgattcatttttctaagaaggactatctgcaagcagaa
gcatgtttccagagagcacttgagaaagactccgaagttgctgaatatcattatcagctt
gggttgacatactggttcattggtgaagaaacaagaaaagataaatcaaaggctcttgcc
cattttctgaaggctgcaagactggacacatacatgggtaaagttttctgctatttaggt
cattattaccgccatgtcgctggagacaggagcagagctcgtggatgctacaggaaagcc
tttgaattagatggcagcgatgctgagtccggagcagcagccgttgacctgagtgtggaa
cttgaagacatggaaactgctttggctatcttaacagcagtaactcaaaaggcaagtgcc
ggagcagcgaagtgggcctggctgaggcgaggcctgtatcatctgagagctggtcagcat
tctcaagccgtggccgatttgcaggcggcacttagggcagacccaaaggactgcaattgt
tgggaatccttgggagaggcatacttgagcaggggaggttatacgacagccttgaagtct
ttcaccagagccagtgagctgaacccagactccacctacagtgtttttaaagtggcagcc
atacagcagatcctaggcaggtatgcagaggctgttgctcagtatcagctgatctttgaa
aagaaagaggattatgtgccggccttgaaaggtttgggtgagtgctatctgatgatggcg
aaagcagccttagcggattttctggacggaaaggcggtagactatgtggaaaaagcgctg
gaatattttactagggcactgcaacatcgaactgatgtgtcctgcctctggaagctcgct
ggggatgcctgcaccagcctgcatgctgtttcaccatctaaagtgtgtgttcatatccta
ggagtcctcctcggtcagcagggaggaagagaagtactaaagaaagatgagctcctgcat
cttggaggaaggtgttatggtcgtgcgttaaagttgatgtctacatctaatacatggtgt
gatcttggaattaattattaccgccaagcacagcatctagcagagacaggcaacagcacg
gatggtcttacagagctactggagaaatctgtgcattgtctgaaaaaggctgtgagactg
gacagtagtaatcacttatactggaatgctcttggtgtgattgcgtgtcaccgtggtatt
ggaaattatgcccttgctcagcactgttttatcaaatcaatccaggcagaacaaattaat
gctgctgcctggaccaacttaggcgtgctctaccttgcgactgaaaacattgagcaagct
catgaagctttcaaaatggcccagtcccttgatccgtcttatttactgtgctggattgga
caagctcttattgcagagacagttggaagttatgacaccatggatctcttcagacacact
acagagctcagtatgcatactgaaggagccataggttatgcatattgggtttgtacaaca
ttacaagataaaagcaacagagaaacggagctctacaggtataacatcctccagatgaac
gctgtccctgcagcacagggtgttctgtgtaaatatgtggaaaggattcagaattacgct
ccagctttcacgatgttgggttatttaaatgaacatctgcagctgagaagagaagccgca
gaggcgtaccaaagggcggctgcattgttacatcccacagaagaccaagacacctacact
gttacagtgagaaactggggcagattgctatgctccattggtgaatatgacagagctgtg
caagcctttgagttgacgccccttgaggaactagaggacatcatagggtttgctttggcc
ttgtttatgaagggacggtataaggagagcaacgaagcctatgagagagccttgactgtt
gtgaaatcagagcaagacaaagctcatgtcttgacagcgatggcaataacagaatataaa
caaggacaaatggatgcagccaaggcattgcttttcaaatgctctattttaaaggaacca
accatcgaaagcctgcaagccctgtgtgccctagggttagcaatgcaggatgccacactg
tcgaaagcagctcttaatgagttactgaagcacgtcagacacaagcaggattaccacagg
tgccttctcacggcggcagtttgtgcactgcagggccgcagtgtggctgtgcaaagacag
gccgctaaggctgtccacagtaacccagctgacccggctctttggtctttgctgtctcga
gctgttgctcagtatactcaacggaatgcaaagggaggtgctgtagctggactggtagct
catattctggattcaaatcatggaaagaaggcattattgtatactgcgttaaaccagttg
gccatgggaagcagttcagcagaagacagaaaaaatgttgctctaaagaccattcagaaa
gcagctttcctttctccagatgaccctgctgtctgggctggactgatggcagcctgccat
gctgatgacaaactggccttggtcagcaacactcagccaaagagggccaatttgcacttg
gcacagctgtctgctgtttctattgcacttaaggacaaagacattttgcagaattacagc
cagtcacttgaaaagtggtgtctctctcaagctgtcactggtctaattgacacaggaaga
atatctgaagctgaatctctgtgcacaaagaatttaaaaggcaaccctgatcagccagct
gttatcttgctgttgagacaagtgcagtttaaatcactcctggagtctcagaagcctctc
ccagatgctgtactggaagaactgcaaaaagcagtcatgtccaactccacctctgttccg
gcctggcagtggctggcacaggtgtatcagtcccaaggaatgatgggtgctgcagagatg
tgctacagaaagagtctacaagtggcgtcccaacagtgcagctggagtgggaagctctcg
agtctgttgaagctagctctgcttgcattggatgtgtgcatggctaatgtttctggtgat
cactggtcgtccttgcttcaagaagccacaagtgaggccttgaaagtctgcttctctccg
ctggctgtcttcttgcaagctttgttacagttcaaccgtaagatgggagcaagagagacg
cggcgactcttggagagagtagtgtaccagcctggctatcccaactcaattgtatcaacg
gcacgttggtacctcttaagacacctctatgcgaaaaatgaccaggagctcattgatgtg
ttggtgaagaatgctgaaacccacagtgataaaaggacactggaactgaatgagaagctg
tcatcacagtaa
DBGET
integrated database retrieval system
