Alexandromys fortis (reed vole): 126493870
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Entry
126493870 CDS
T08493
Name
(RefSeq) contactin-1
KO
K06759
contactin 1
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot04514
Cell adhesion molecule (CAM) interaction
mfot04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
126493870
04517 IgSF CAM signaling
126493870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mfot04515
]
126493870
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
mfot00537
]
126493870
Cell adhesion molecules [BR:
mfot04515
]
Immunoglobulin superfamily
Contactins
126493870
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
mfot00537
]
Others
126493870
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
FN3_DSCAM-DSCAML_C
Ig_5
Pur_ac_phosph_N
Sp38
Fn3_VIN3
C2-set_2
Motif
Other DBs
NCBI-GeneID:
126493870
NCBI-ProteinID:
XP_049986947
LinkDB
All DBs
Position
Unknown
AA seq
1020 aa
AA seq
DB search
MKMSLLVSHLLLISITSCLAEFTWHRRYGHGVSEEDKGFGPIFEEQPINTIYPEESLEGK
VSLNCRARASPFPVYKWRMNNGDVDLTNDRYSMVGGNLVINNPDKQKDAGIYYCLASNNY
GMVRSTEATLSFGYLDPFPPEERPEVKVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVF
ITMDKRRFVSQTNGNLYIANVEASDRGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPY
PADIVVQFKDIYTMMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNI
QLEDEGIYECEAENIRGKDKHQAKIYVHAFPEWVEHINDTEVDIGSDLYWPCVATGKPIP
TIRWLKNGYAYHKGELRLYDVTFDNAGMYQCIAENAYGSIYANAELKILALAPTFEMNPM
KKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGG
VYTCFAENNRGKANSTGTLVITNPTRIILAPINADITVGENATMQCAASFDPSLDLTFVW
SFNGYVIDFNKEITHIHYQRNYMLDANGELLIRNAQLKHAGRYTCTAQTIVDNSSASADL
VVRGPPGPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPI
IEGNMEAAKAVDLIPWMEYEFRVVATNTLGTGEPSIPSNRIRTDGAAPNVAPSDVGGGGG
SNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTNPDTGRYVHKDETMTPST
AFQVKVKAFNNKGDGPYSLIAVINSAQDAPSEAPTEVGVKVLSSSEISVHWKHVLEKIVE
NYQIRYWAAHDKEAAAHRVQVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPSSDVIEA
FTRKAPPSQPPRIISSVRSGSRYIITWDHVVALSNESTVTGYKILYRPDGQHDGKLFSTH
KHSIEVPIPRDGEYVVEVRAHSDGGDGVVSQVKISGVSMLSSSLLSLLLPSLGFLVYLEF
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgtcattgctggtcagccacctcctgctaatctccattacatcctgcctagca
gagttcacatggcacagaagatatggtcatggagtttctgaagaggacaaaggatttgga
cccatttttgaagagcagccaatcaataccatttacccagaagagtctctggaaggaaaa
gtttcactcaactgccgggcacgagccagcccatttccggtttacaaatggagaatgaat
aatggggatgttgacctgacgaatgaccgatacagtatggtaggcggaaaccttgtcatc
aacaaccctgacaagcagaaagacgctgggatatactactgcttggcatccaataactat
gggatggtcagaagcacggaggcgaccctgagttttggatatctcgacccctttcctcct
gaggagcgtccggaggtgaaagtgaaggaagggaaaggcatggtgcttctctgtgaccct
ccataccactttccagatgaccttagctaccgctggctcctgaatgaattccctgtattt
atcacaatggacaagcgaaggtttgtgtctcagaccaacggcaatctctacattgcaaat
gttgaggcttctgatagaggcaactactcctgctttgtgtccagcccttccattacaaaa
agtgtgttcagcaagtttattcccctcatcccaatacctgaacgaaccacaaagccatat
cctgctgatattgtagtgcagtttaaggacatctataccatgatgggccaaaacgtgact
ttagagtgttttgctcttggaaaccctgttcctgacatccggtggcggaaggtgctagag
ccaatgcccagcacggctgaaataagcacctcgggggctgttctcaagatctttaatatc
cagttagaagatgaaggcatctacgaatgcgaggccgagaacatccggggaaaggacaag
caccaggcaaaaatttacgttcacgcatttcctgagtgggtagagcatatcaatgacact
gaggtggacataggcagtgacctctactggccttgcgtggccacagggaagcccatccct
accatcagatggctgaaaaacggatatgcgtatcacaaaggggaactaagactgtatgat
gtgacttttgacaatgctgggatgtaccagtgcatagcagaaaatgcgtatggatccatt
tatgcgaatgccgagctcaagatcctggcattagctccaacttttgaaatgaatcccatg
aagaaaaagatcctggctgctaaaggaggaagagttatcattgaatgcaagcccaaggct
gcgccgaaacccaagttttcgtggagcaaagggacagagtggctggtcaacagcagcaga
atactcatatgggaagatggtagcttggaaatcaataacattacaaggaacgatggagga
gtctatacatgctttgcagaaaataatagggggaaagccaatagcactgggactctggtg
atcacaaatcccacacgaatcattttggccccaattaatgctgatatcactgttggagaa
aacgctacaatgcagtgtgctgcgtccttcgatccttccctggatctcacatttgtttgg
tccttcaatggctacgtgattgattttaacaaagaaattacacatattcattaccagagg
aattatatgctcgatgccaatggggagctgctcattcgcaatgcccagctgaaacacgcc
ggaaggtacacctgcacggcacagaccatcgtggacaactcttcagcttccgctgacctt
gttgtgcgaggccccccaggccctccaggtggcctgagaatagaagacattagagctacc
tctgtggcactgacttggagccgaggttcagacaatcacagtcctatctctaaatacact
atccagaccaagaccattctctcagatgattggaaagatgccaagacagatcccccaatc
atcgaaggaaacatggaggcagcaaaagcagtggatttgatcccgtggatggagtatgaa
tttcgagtggtcgcaaccaatactttaggtacaggagaacccagcataccttcaaacagg
atcagaacagatggcgctgcaccaaatgtggctccctcagatgtaggaggtggcggtgga
agcaacagagagctgacaataacatgggcgcccttgtcaagagaataccattatggtaac
aatttcggttacatagtggcatttaagccatttgatggagaagaatggaagaaagtgaca
gttactaacccagatactggtcgctatgtccataaagacgaaaccatgaccccttccact
gcgttccaagtaaaagtgaaggcattcaacaacaaaggggatgggccctacagcctcatc
gctgtcatcaactctgcacaagatgctcccagcgaagcccccacagaagtaggggtgaaa
gtgctgtcgtcttcagagatatctgttcattggaagcatgttctagagaaaatcgtggaa
aactatcagattcgatactgggctgcgcacgacaaggaagcagcagcacaccgagtgcaa
gtcaccagccaggagtactccgccaggctcgagaacctgctgcctgacacccagtacttc
attgaagttggagcctgcaacagtgccgggtgtggaccttcgagtgacgtgatcgaggcc
ttcaccagaaaagcccctcccagccaaccaccaaggatcatcagttcggtgaggtctggg
tcccgctatataatcacgtgggatcatgttgttgcgctgtcaaatgaatctacagtgacg
ggatacaagatactctacagacctgatgggcaacatgatggcaagctgttctcaacccat
aagcactccatagaagtcccaatccccagagacggagagtacgttgtcgaggtccgagca
cacagtgatgggggagacggagtagtgtctcaagttaaaatttcaggtgtgtccatgctc
tcgtcaagtctcctcagcttgctactgccctcccttggcttccttgtctacttggaattc
tga
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