Mycoplasmopsis fermentans JER: MFE_03640
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Entry
MFE_03640 CDS
T01325
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
mfr
Mycoplasmopsis fermentans JER
Brite
KEGG Orthology (KO) [BR:
mfr00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MFE_03640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfr03021
]
MFE_03640
Transcription machinery [BR:
mfr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MFE_03640
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
ADN68963
LinkDB
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Position
430553..432022
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AA seq
489 aa
AA seq
DB search
MNKANEIKSIISMIKKHAKSLKKKQISQSKVYDYLDSIKVEIDDESMDEVLGQLFESGLI
LDESDEGDLDDVSLDELDSELEFEEKSKKDENTDEMDVKNKKSDLYDEDLDEDDNYNLVG
SYGDDDESQEYIIEDDYVDSSYDEDDEDEDEEELSSKKKSKKSKNNEDEDSLELESYENE
EINLNDNKVIKDKDLTNKLTETNDIVKWYMRWIGKYGKLLTIEEEKKLAQEMEKGGFRGK
RARDKLIKRNLRLVINNAKKYKNRGLSFIDLISEGNSGIVKAVSKYNVSKGFKFSTYATW
WIRQAITRAVADQARTIRVPVHMVETINKITKIERELQQELGYEPTDEMIAERYGNGYDA
EKVRYIRKINIDPISLDKQIGKENDSSFSDFVKDESVVNPVDYASQEELVETLNSILEKS
LDDDERILICKRFGVGVDENGNKYPIHSLEKLAEERNVSKERIRQIENKILRKLKSSTRK
GRHLKDFIK
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagcaaatgaaattaaatcaataatctcaatgattaaaaaacatgcaaaaagc
ttaaagaaaaaacaaataagtcagtctaaagtttatgattatttagattcaattaaagtt
gaaattgatgatgaatcaatggacgaagttttaggccaactttttgaatcaggcttaatt
cttgatgaaagcgacgagggcgatttagacgatgttagtttagatgaattagactcagaa
ttagaattcgaagaaaaaagtaaaaaagacgaaaacaccgatgaaatggatgttaaaaac
aaaaaaagtgatttatatgacgaagatttagatgaagatgataactacaatttagttggt
tcatatggtgacgatgatgaaagtcaagaatacattattgaagatgactatgttgattca
agttatgatgaagatgacgaagatgaagacgaagaagaattaagcagtaagaaaaaatcg
aaaaaaagtaaaaataatgaagatgaagattcacttgaacttgaatcttatgaaaatgaa
gaaattaaccttaatgataacaaagtaattaaagataaagatttaaccaacaaacttacc
gaaactaatgatattgttaaatgatacatgcgttgaattggtaaatatggaaaactttta
accattgaagaagaaaagaaacttgctcaagaaatggaaaaaggtggctttagaggaaaa
cgtgctagggataaacttatcaaacgtaatttacgtttagttatcaataatgctaaaaaa
tacaaaaatagaggacttagctttattgacttaatctcagaaggtaactcaggtatcgta
aaagcagtttcaaaatataacgtttcaaaaggctttaaattctcaacatatgcaacttga
tgaattcgtcaagcaataactcgcgctgtagctgatcaagctagaactatcagagtacct
gttcacatggttgaaactattaacaaaatcactaaaattgaacgtgaattgcaacaagaa
ttaggttatgaaccaactgatgaaatgattgctgaaagatatggcaatggctatgacgct
gaaaaagttagatacattagaaaaatcaacattgaccctatttctttagacaaacaaatt
ggtaaagaaaatgattcatcatttagtgactttgttaaagatgaaagtgttgttaatcca
gttgattatgcttcacaagaagaattagtggaaacactaaattcaattcttgaaaaatca
cttgatgatgatgaaagaattttaatctgcaaacgtttcggagttggagttgacgaaaat
ggaaataaatacccaattcactcacttgaaaaattagcagaagaaagaaatgtttctaaa
gaaagaattcgtcaaattgaaaacaaaattttaagaaaacttaaaagtagcacacgtaaa
ggacgtcacttgaaagatttcattaaataa
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