Mycoplasmopsis fermentans JER: MFE_07040
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Entry
MFE_07040 CDS
T01325
Symbol
dnaE
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mfr
Mycoplasmopsis fermentans JER
Pathway
mfr03030
DNA replication
mfr03430
Mismatch repair
mfr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MFE_07040 (dnaE)
03430 Mismatch repair
MFE_07040 (dnaE)
03440 Homologous recombination
MFE_07040 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfr03032
]
MFE_07040 (dnaE)
03400 DNA repair and recombination proteins [BR:
mfr03400
]
MFE_07040 (dnaE)
Enzymes [BR:
mfr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MFE_07040 (dnaE)
DNA replication proteins [BR:
mfr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MFE_07040 (dnaE)
DNA repair and recombination proteins [BR:
mfr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MFE_07040 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ADN69274
LinkDB
All DBs
Position
complement(793382..796285)
Genome browser
AA seq
967 aa
AA seq
DB search
MKKYVNLYNTSEYTFLDSLIRIDDLVRLSKEHNLPAVVLSDRNNMFGLGVFMEACLKYDI
KGIIGVDLDVDNYRFIVLAKNYQGYQKINQLIYQKSINKDIEISELWNPNLIVLDHPKYG
YYAQTKDNKYSASKNYYINSSDASLPNSILVKENKLFEANDNETLNYLQKLGNLEETKHY
ANYFDEVNVDSKIIDRIYSIINECNVIFPKKALHLAPFQNNDEATNEKLFVSLLKAGAKR
LTSELKNYPEWNKRLEYEFNVIKKLGYINYFLIIQDLVNWAKSQKIAIGPGRGSAAGSLV
SYLLNITEINPLRYNLLFERFLNPDRVSWPDIDIDIQDDRRFEVFEYLQKKYGVDKTGLI
STFQTIGAKMAIRDMGRVIGISLIDINRISKTIKSDNLTDAYKNDIDFKIEMDNYPELYK
HALKIEGLPRQQSFHAAGFIIAKDKLFNYVPVCLSNLDNYQQVQVPMNYIESYGLLKIDL
LGLRTLTEIQLIEKSLEENQKFDYLVKSDPQILNDPKTLTMLNLGFTEGIFQLESPGMKK
TIQKVVLNSFDDLYAIISLFRPGPMDFINDYATNKKNQKLIKKIHPDYDKVVANTYGIIV
YQEQIMQIAQSIGGMTFAQADLLRKAISKKSEVDIKKYRSIFFENAIKKGINEKIINAIY
NNIEKFGLYGFNKSHAVSYAYLTMKMSYYKARYANLFYSSLITNAAGAQATINKYVAEIK
KLNFPVYSPNILHSSNKCIVTNDGIYLPFEMIKGFGAEGVNKIVADLNENGPFQKNLIDT
MLRLRFAGIKDAAMEILIKANAFRDFGHMKYILSCDNQIKDIFKVLSSHSTYKEALKDIK
KMGYYDIVFDQENERDINYEMDYEIALLGELYNAFSTSIYEAKYKNKLNTITSSIPVSVA
AEVADLRRPRGKEFSVLELRDSTAKITFFVNNKVLASSLPLKKGQIIEATISFSRNKHNL
ISWKGIQ
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatatgtcaatttatacaatacaagtgaatacacttttttagattctttaatt
aggatagatgatttagttagattatcaaaagaacacaatcttcctgcagtagttttaagt
gaccgaaacaatatgttcggtttaggtgtttttatggaagcatgcttaaaatatgatatc
aaaggcattataggagttgacttagatgtagataattatcgcttcatagtcttagcaaaa
aactaccaaggttaccaaaaaattaatcaactaatttatcaaaaaagtatcaataaagat
attgaaattagcgaattgtgaaatcctaatttaatagttttagatcatccaaagtatggt
tattatgctcaaactaaagataataaatatagtgcaagtaaaaactactatattaattct
tcagatgcttcattgcctaactctatattagtaaaagaaaataaactttttgaagctaat
gataatgaaacactaaattacttacaaaaattaggcaatttagaagaaactaaacactat
gccaactattttgatgaagttaatgtagatagcaaaataattgaccgtatttattcaata
atcaatgaatgtaatgttatttttcctaaaaaagccttgcatttagctccttttcaaaat
aatgatgaagctaccaacgaaaaactttttgtttcgcttttaaaagcaggcgctaaaaga
ctaacaagtgaattaaaaaattatccagagtgaaacaaaagacttgaatatgaatttaat
gtcattaaaaaacttggctatattaactactttttaattattcaagatttagttaactga
gctaaaagtcaaaaaatagcaataggacctggtcgtggtagtgcagcaggttcacttgtt
tcttatcttttaaatataactgaaattaatccattaagatataacttactttttgaaaga
tttttaaaccctgatagagtttcatggcctgacattgatatagatattcaagatgatcgt
cgttttgaagtttttgaatatttacaaaaaaaatatggagtagataaaactggacttatt
tcaacttttcaaactattggtgctaaaatggcaattagagatatgggcagagttatagga
attagcttaattgacatcaaccgcatcagtaaaactattaaatcagataacttaactgat
gcttataaaaatgatattgactttaaaattgaaatggataattatcctgagttatataaa
catgcacttaaaatcgaaggcttacctcgtcaacaaagtttccatgcagcaggttttatt
attgctaaggacaaattatttaattatgtccctgtttgtttaagcaatttagacaattac
caacaagtacaagtaccaatgaattacatagagagttatggacttttaaaaattgacttg
ctaggtttaagaactttaactgaaattcaactaattgaaaaaagtttagaagaaaaccaa
aaatttgattatttagtaaaaagcgatcctcaaattttaaatgatcctaaaactttaaca
atgctcaacttaggttttactgaaggaatatttcaattagaatctccgggcatgaagaag
acaattcaaaaagttgtcttgaattcttttgatgatttatatgctattatttcattattt
agacctggacctatggactttatcaatgactatgcaactaataagaaaaatcaaaaatta
attaaaaaaatacatcctgattatgacaaagttgttgccaacacatatggcataatagtt
tatcaagaacaaattatgcaaatagctcaaagtattggcggaatgacttttgctcaagct
gatttattgcgtaaagcaattagcaaaaaaagtgaagttgatatcaaaaaatatagaagc
atattttttgaaaatgccattaaaaaaggcataaacgaaaaaattattaatgctatttat
aacaatattgaaaaatttggactatacggttttaataaatctcatgctgttagttatgca
tatttaactatgaaaatgtcatactataaagctcgttatgctaacttattttatagctct
ttaattacaaatgcagctggagcacaagctacaattaataaatatgtagctgaaattaag
aaacttaattttccagtttattcgccaaatattttgcattcaagtaataaatgtatagta
acaaacgatggcatttatttaccttttgaaatgattaaaggttttggagctgaaggtgtt
aataaaattgtggctgatttaaatgaaaatggaccatttcaaaagaatttaattgataca
atgcttagacttcgttttgcaggtattaaagatgctgctatggaaatattaattaaagcc
aatgcttttagagactttggacacatgaaatatatattatcttgtgataatcaaattaaa
gacatttttaaagttttatcttcacattcaacttataaagaagcattaaaagatatcaaa
aaaatgggttactatgatatagtttttgatcaagaaaatgaacgtgacataaattacgaa
atggactatgaaatagctcttttaggtgaattatacaatgcttttagtacttcaatttat
gaagcaaaatacaaaaataaattaaatacaataacctcttcaattcctgtttctgttgct
gctgaagtagctgatttaagaagaccaagaggtaaagaatttagtgttttagaattaaga
gatagtacagctaaaattactttctttgttaacaacaaagtattggcaagttcacttcct
cttaaaaaaggacaaataattgaagctacaattagtttcagtcgtaacaaacataattta
attagttgaaaaggaattcaataa
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