KEGG   Megalopta genalis: 117218109
Entry
117218109         CDS       T07400                                 
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
mgen  Megalopta genalis
Pathway
mgen03013  Nucleocytoplasmic transport
mgen03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mgen00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117218109
  09122 Translation
   03013 Nucleocytoplasmic transport
    117218109
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mgen03019]
    117218109
   03041 Spliceosome [BR:mgen03041]
    117218109
Messenger RNA biogenesis [BR:mgen03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     117218109
Spliceosome [BR:mgen03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    117218109
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 WD40_WDHD1_1st Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd NBCH_WD40 WD40_Gbeta Beta-prop_EML Beta-prop_WDR41 Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_ACSF4 Beta-prop_TEP1_C WDR54 Beta-prop_SCAP EIF3I Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_LRRK2 Beta-prop_DCAF4 DUF6970 Beta-prop_EIPR1
Other DBs
NCBI-GeneID: 117218109
NCBI-ProteinID: XP_033322093
LinkDB
Position
Unknown
AA seq 332 aa
MMSETFNHKLFYNTVLSQAFSPDGNFLVAGNIYGDVSVFELSKALGPHKVEENELQGPTY
QFAAHPNQQVMSMVSTENFLVTGSSGEVCGWNWKMVTSNKAPKIKVSWTIQLPVNKDSYE
KPDVNYLVYSKPNNVLYAGCGDNHIYVISLEDGRIIRNLQGHTDYVHCLSLMGSQLASSG
EDGTVRLWDLRKKENTNILTPHLVEKVARPWLGKWIGAIDFTDDWLLCGGGPSLSLWHMR
TMEAATVFDLPDEGIHVANIYEERVIAAGTAPHVYHLTYQGETLAKVPTSSYTVYSIVYQ
ETPQKMLSIGGSSNNLDVCTNFNYRELMLKFE
NT seq 999 nt   +upstreamnt  +downstreamnt
atgatgtccgaaacgtttaatcataaattattttataacacggtgttgtcgcaagctttt
tctccagatggaaattttttggtggctggaaatatttatggagacgtgtcagttttcgaa
ttatcgaaagcgctggggccccataaagtagaggaaaatgagctgcaggggcccacatac
caatttgctgctcatcctaatcaacaggtaatgagcatggtatctacggaaaatttcctt
gtaactggaagctctggagaagtgtgtggatggaattggaagatggttacgtctaataaa
gcgccgaagattaaagtctcatggacgattcaacttcccgttaataaggatagttacgag
aaaccagacgtaaactacctagtatactctaaaccgaacaatgtgttatacgccggttgt
ggggacaaccatatttatgtaattagtctggaagatggtagaattataaggaatttacag
ggacacaccgattacgttcattgtctctcattgatgggtagtcaattagcgtcaagtgga
gaagatggaacagtgaggctgtgggatctacgtaaaaaagagaacactaatattctaact
ccacatttggtagaaaaagttgcgcgaccgtggttgggcaaatggatcggagcgatagac
ttcaccgacgactggctcttatgcggaggcggaccgagtctatcgttatggcatatgcgt
acgatggaagcagccaccgtattcgacttaccggacgaaggtattcacgtggcaaatata
tacgaggaacgcgtgatagctgctggaacagcaccccatgtctaccatctaacgtatcaa
ggagaaacgttagccaaagtgccgacctccagctacacggtgtacagcatagtttaccaa
gaaacaccgcagaagatgctcagcataggcggctcctcgaacaacctcgacgtgtgcacg
aactttaattatcgcgaactgatgctgaagttcgagtaa

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