Mucilaginibacter ginkgonis: GO620_014145
Help
Entry
GO620_014145 CDS
T07235
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mgik
Mucilaginibacter ginkgonis
Pathway
mgik03410
Base excision repair
mgik03430
Mismatch repair
mgik03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mgik00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GO620_014145 (recJ)
03430 Mismatch repair
GO620_014145 (recJ)
03440 Homologous recombination
GO620_014145 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgik03400
]
GO620_014145 (recJ)
DNA repair and recombination proteins [BR:
mgik03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
GO620_014145 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GO620_014145 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GO620_014145 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Toprim
Motif
Other DBs
NCBI-ProteinID:
QQL51580
UniProt:
A0A6I4HZ87
LinkDB
All DBs
Position
complement(3040216..3041898)
Genome browser
AA seq
560 aa
AA seq
DB search
MPDDDVIQQLAEALSIDPVLAALLLQREIKSFEEAKHFFRPDIRHLHDPFLMQDMEKAIE
RIETALEKEEKILIYGDYDVDGTTAVALVYSFFSKRTTNISYYIPDRYKEGYGISTQGID
YAAENSYSLIIALDCGIKSVDKIDYANSLGIDFIICDHHLPGGDLPKAIGVLDPKRADCE
YPYKELSGCGIGFKLVQAYAEKNGIPFESIACYMDLVAVSIACDIVHITGENRTLAYFGL
QKLNSEPCTGIKTLMEIAGKKERVNISDVVFSIGPRINAAGRIADAKHAVALLISDDVLN
AGDIGALINGHNAERKGHDQTITDEALSMIKSDAALVAKKSTVVFNERWHKGVIGIVASR
LTEKYYRPTIVLTRSNGHVAGSARSVYGFDLYEALSNCSDLLTQYGGHMYAAGLTMPPEN
VLAFIDRFEEVVGATITDEQLIPEIKIDAEIKLSQINSKFYRVLSQFGPFGPANMTPVFL
SKGVRICGQPLLVGSEHLKMFVQQDGSAMFECIAFGQHSWIRDLKQDRPFDICYCIEENV
WRDKRTLQLNIKGIRQAAQQ
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatgacgacgtgatacagcaactggctgaagcactaagcatcgatcccgtttta
gcagccctgcttttacagcgcgagatcaagtctttcgaggaagcaaagcattttttccgg
ccggatatccgccacctgcacgatccttttttaatgcaggatatggaaaaggcaatcgag
aggattgaaactgccttggaaaaagaagaaaaaattctgatctatggtgactacgatgtg
gacgggaccactgccgtagccttggtttacagtttcttctcaaagcgtactaccaacatt
agctattacattcccgacaggtataaagagggctatggcatttctactcaaggaatagac
tatgctgcggaaaacagctattcgctgatcattgctttagactgcggtataaaatcggta
gataagatagattatgccaacagtttagggatagattttattatttgcgaccaccatctt
ccgggaggtgatctgccgaaggcgataggcgttttagacccaaagcgcgcggattgtgaa
tatccttacaaagagctttcgggttgtggcattggctttaaactggtgcaggcttatgcc
gaaaagaatgggatcccgtttgaaagcattgcctgctatatggaccttgtagccgtgagc
attgcttgcgatattgtacacattaccggcgagaaccgcacgctggcttactttggcctc
caaaagttaaatagcgagccctgcacgggtataaagaccttgatggagattgcaggtaag
aaagaacgcgtaaatatatccgacgtggtattcagcatcggcccgcgaattaacgcggca
ggccgtatagccgacgccaaacatgcggtagccctgctgatatccgatgatgtgcttaac
gccggcgacatcggcgcgttgatcaatggccacaatgccgaacgtaaaggccatgaccag
accattacagacgaggctttaagtatgattaaaagcgatgcggcgcttgttgccaaaaaa
tctaccgtagtatttaatgagcgctggcataaaggtgtgataggtattgtggcttcgcgg
ctaaccgaaaaatattaccgcccgacaattgtattaacgcgttctaacgggcatgtggcc
ggctccgcgcgttctgtttacggatttgatctatatgaagcgcttagtaattgcagcgac
ttgcttacgcaatatggcggccacatgtatgcggcaggattaaccatgccgcccgaaaat
gttctagcctttatagaccgttttgaagaggttgttggcgcaacgataactgatgaacag
ttgattcccgagataaagatcgatgccgaaatcaaactgtcgcaaataaactcaaaattt
tatagggttttaagccagttcggtccgtttggccccgctaatatgacgcctgtgttcttg
tcgaaaggggtaagaatatgcggacagccgttattggttggcagcgaacacttaaaaatg
ttcgttcagcaggatggttcggcaatgtttgagtgtatcgcgttcgggcaacactcatgg
attcgcgatttaaaacaagaccggccatttgacatttgttattgtattgaagaaaatgtt
tggcgcgataagcgtactttgcaactcaatattaaaggaataagacaagctgcgcagcag
taa
DBGET
integrated database retrieval system
