Mucilaginibacter ginsenosidivorax: FSB76_11825
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Entry
FSB76_11825 CDS
T06204
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mgk
Mucilaginibacter ginsenosidivorax
Pathway
mgk03410
Base excision repair
mgk03430
Mismatch repair
mgk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mgk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FSB76_11825 (recJ)
03430 Mismatch repair
FSB76_11825 (recJ)
03440 Homologous recombination
FSB76_11825 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgk03400
]
FSB76_11825 (recJ)
DNA repair and recombination proteins [BR:
mgk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
FSB76_11825 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FSB76_11825 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FSB76_11825 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QEC76604
UniProt:
A0A5B8VYT1
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All DBs
Position
complement(2849510..2851216)
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AA seq
568 aa
AA seq
DB search
MNKRWAIRDNADEDLVRKLSAELNIDAVLSSLLVHRGVNDFEGARYFFRPDQRHLHDPFL
MKDMEEAVIRIEIAIAAGEKILVYGDYDVDGTTAVATVYSFFSKQYKNMEYYIPDRYKEG
YGISTQGIDYAAQNGFSLIIALDCGIKSVDKIDYANTLGIDFIICDHHLPGAQLPAAVAV
LDPKRADCEYPYKELSGCGIGFKLIQAYAEKNGIRFEAVLEYIDLACISISCDIVHITGE
NRVLAHFGLQKINTNPCVGVKTLIEVAGKTPGNLTISEVVFLIGPRINAAGRIDDAKHAV
ELLIACDEKAAREKGMMINSRNQERKGHDLNITDEALEIIDSDEVLIGKKSTVVFNKDWH
KGVIGIVASRLTEKYYRPTIVLTQSNGHVAGSARSVLGFDLYEALCECKDLLIQFGGHKY
AAGLTMLPENVEAFKDRFEEVVSATILPEQLIQQIQIDAELRLSQIEPKFFRILNQFAPF
GPENMAPVFISKNVYVSGNAGLVGQAHIKMAVMQEGTAAFDCIAFNHGEYLPQLKPGVPF
DICYSIEENIWRERRNIQLNIKGIRFKS
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacgttgggcgataagggataatgccgatgaggatttggtacgcaaattatct
gccgaactgaatattgatgccgttttaagcagcctgctggtacacaggggggtaaacgat
tttgaaggcgcccggtattttttcaggcccgatcagcggcacctgcatgatccttttttg
atgaaggatatggaggaagcggttatacgcattgaaatcgccattgccgccggcgaaaag
atactggtttatggcgattacgatgttgatggcaccaccgctgttgccactgtttacagc
ttttttagtaagcagtataaaaacatggaatactatattccggataggtataaagaaggt
tatggtatatcaacccaggggattgattatgcggcccaaaatggttttagccttattata
gcacttgattgcggtattaaatcggtggataaaattgactatgccaacaccctggggata
gattttattatttgcgaccaccacttgcccggcgcgcagttacccgcagctgtggcggtg
ctcgaccccaaacgggctgattgcgaatatccctataaagaattatcgggctgcggtata
ggctttaagctgatacaggcgtatgccgaaaaaaacggcatccggtttgaagccgtgctt
gaatatatcgacctggcctgtatcagcatatcgtgcgatattgtacatattactggcgaa
aaccgggtgctggcacactttggtctgcaaaaaataaataccaacccgtgtgttggtgta
aaaacgctgattgaggttgcaggcaaaactccgggaaacctaaccatatctgaggtggtg
ttcctgataggcccccgtattaacgctgccggccgtattgatgatgccaaacatgcggtt
gaattactgatagcttgtgatgaaaaagccgccagggaaaaaggcatgatgataaactcc
cgtaaccaggagcgaaaaggccacgatttaaatattaccgacgaagccctggagataata
gacagtgacgaggtgctgataggcaaaaaatctaccgtggtatttaacaaggattggcac
aaaggcgttattggtattgtggcatcgcgccttaccgaaaagtattaccggcctactatt
gtgcttacccaatcaaacgggcatgtagcaggttcggcgcgctccgtgctgggttttgat
ctttacgaggcactttgcgaatgcaaagatctgctcatccagtttggtgggcacaagtac
gccgcagggttaaccatgctgcccgaaaacgtggaggcttttaaagacaggtttgaagaa
gtggtgagcgcaaccatattgcccgaacaattaatacaacagatacaaattgacgccgaa
ttacgtttaagccagatagaaccgaaatttttcaggatattgaaccagtttgcgcccttc
gggcccgaaaatatggcgccggttttcataagtaaaaatgtgtatgttagcggtaatgca
ggcctggtggggcaggcacatataaaaatggctgtaatgcaggaaggtacggcagccttt
gattgtattgcctttaaccacggcgaatacctgccgcaattaaagccaggcgtgcccttt
gatatttgctacagcattgaagaaaacatttggcgcgaacgaagaaacatacagttgaat
ataaaggggataaggtttaagtcttaa
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