Mucilaginibacter ginsenosidivorax: FSB76_12875
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Entry
FSB76_12875 CDS
T06204
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mgk
Mucilaginibacter ginsenosidivorax
Pathway
mgk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FSB76_12875 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgk03019
]
FSB76_12875 (recQ)
03400 DNA repair and recombination proteins [BR:
mgk03400
]
FSB76_12875 (recQ)
Enzymes [BR:
mgk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FSB76_12875 (recQ)
Messenger RNA biogenesis [BR:
mgk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FSB76_12875 (recQ)
DNA repair and recombination proteins [BR:
mgk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FSB76_12875 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HTH_40
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
GerE
Thioredoxin_17
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
QEC76795
UniProt:
A0A5B8W1J2
LinkDB
All DBs
Position
3101730..3103901
Genome browser
AA seq
723 aa
AA seq
DB search
MNSLQALQKYFGYSAFRHQQEAIIQHILNGQDVMALMPTGGGKSLCYQLPAVLLNGLTIV
ISPLIALMKDQVDSLNVSGIPAAFLNSAQNPDEQRQLVEKLRNNQIRLLYLAPERLFGAE
NKLVPFLKTLNVVQIAIDEAHCISSWGHDFRPEYLMLAQLKTEFPNVPVIALTATADKLT
QKDILEKLNLNKPKVFVSSFNRANITYRVIPKRNSFQQLVNFLNERKDESGIIYCLSRKS
TEDLADDLKAAGFAAEAYNAGLSSEIKVRNQEAFLRDEVKIIVATIAFGMGINKSNVRYV
VHIDLPKNIEGYYQETGRAGRDGLASEALLLYSPGDAGKLQHFARIEGNEAQSRIMLNKL
NDMVRYCQLQSCRRQYLMNYFDEAFPPNCGSCDVCLTEFKRFDGTLIAQKALSAVARLNE
RFGINYVIDFLRGSKSEKIRDEHKQLKTYGIGADISKPDWQRYIRELLTMGYLQMGGDEY
PIVKLTDQSAAVLKGLQKVEFIESETVEETHTHVQAPPHEAELLSRIKRVRNDIAQHENV
PAYIIVSDATLVEMATYLPQSLDELRLISGFGDVKLARYGRELLQPVKDYAKEKGLESKI
AYKSPKKERKAASVRPVQPIKARKTNDTRTESLRLYQTGKTVAEIATERSLSPMTIESHL
SFFVQSGELEVEALVPAQKIPAIKDAVESYGSQMLSPLKQVLGDDYSYGEIKAVISWMNR
GNV
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaattctctacaggccctgcaaaaatattttggttatagcgctttcaggcaccagcag
gaggccattatccaacatatattaaacgggcaggatgtaatggcgctgatgcctaccggc
ggcggcaaatcattatgctaccagctacccgcggtattgttaaacgggctaaccattgtt
atctcgccgcttattgccctgatgaaagaccaggttgatagcttgaatgtaagcggtata
ccggcagccttcctaaactcggcacaaaacccggatgagcagcgccaactggtagaaaaa
ctaaggaacaaccaaatccgcctgctataccttgcgcccgagcgtttgtttggtgccgaa
aacaagctggttccgtttttaaaaacgctgaatgtagtacagatagccatagacgaagcc
cactgcatctcgtcctgggggcacgattttcgtcctgagtatttgatgctggcccagtta
aaaaccgagttcccgaatgtgccggtcatcgcgcttaccgctactgctgataagctgacg
caaaaagatatcctcgagaaactcaatcttaacaagcccaaagtatttgtatcctccttc
aacagggccaatattacctaccgggttatccccaaaaggaacagctttcagcaactggtt
aactttttaaatgagcggaaggacgagtcgggtattatctactgcctttcccgtaaatct
accgaagatttggccgacgacctgaaagccgccggctttgctgccgaagcctacaacgca
ggcctcagcagcgaaatcaaagtgcgcaaccaggaggcttttttgcgcgacgaggtcaag
atcatcgtggctaccattgcctttggcatgggcatcaataaatcaaatgtgcgctacgtg
gtgcatatcgatctgcctaaaaacatcgagggctattaccaggaaaccggccgtgcaggg
cgcgacggcctggcatccgaggcattgctactgtattcgccgggcgatgccggtaagcta
cagcattttgcaaggatcgagggcaacgaggctcaaagccgcattatgctgaataagctg
aacgatatggtgcgctactgccagctgcaaagctgccgccgccagtacttgatgaactat
tttgatgaggctttcccgcccaattgcggctcctgcgatgtttgccttaccgagtttaaa
cgctttgacggtacgctgatagcccaaaaggcgctctcggccgtggcccggcttaacgag
cgtttcggcattaactatgtgattgattttttacgcgggtcgaaatccgaaaaaatccgc
gacgaacataaacagcttaaaacctatggcataggcgccgatatcagcaagcccgactgg
cagcgctacattcgcgaactgcttaccatgggctacctgcaaatgggtggcgacgaatac
cctattgttaaacttacagaccaaagcgccgccgtgctcaaaggcctgcaaaaggttgag
tttatcgaaagcgaaaccgttgaagaaacccacacccacgtacaggcaccaccgcacgaa
gccgaactgctaagccgcattaaacgcgtacgtaacgatattgcccaacatgaaaacgtg
ccggcctacatcattgtatctgatgctaccctggtggagatggctacctacctgccccaa
agcctcgacgagctgcgccttatctcgggctttggcgatgtaaaactggcccgctacggg
cgcgagctgttgcagcccgtgaaagattacgccaaagaaaaaggcctcgaatcaaaaatt
gcctataaatcgcccaagaaggaacgcaaggcagcgtccgtccgtccggtacaacctatt
aaggcccgcaaaacaaacgatacccgtaccgagtcgctccggctttaccaaaccggcaaa
accgtggccgaaattgccaccgagcgcagcctgtcgcccatgacgatagaaagccacctc
agcttttttgtacaatcgggcgagctggaggtagaagcgctggtacccgcccaaaaaatc
cccgccattaaagatgctgttgaaagctacggctcccaaatgctatcacccctcaaacaa
gtcctcggcgatgactacagttacggcgaaattaaagcggtgataagctggatgaacagg
gggaatgtgtaa
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