Mycolicibacterium goodii: AFA91_25695
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Entry
AFA91_25695 CDS
T04008
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
mgo
Mycolicibacterium goodii
Brite
KEGG Orthology (KO) [BR:
mgo00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AFA91_25695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgo03021
]
AFA91_25695
Transcription machinery [BR:
mgo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AFA91_25695
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Mo25
Motif
Other DBs
NCBI-ProteinID:
AKS36647
UniProt:
A0A0K0XH17
LinkDB
All DBs
Position
5481600..5483006
Genome browser
AA seq
468 aa
AA seq
DB search
MAATKASPATEEPVKRTATKTPAKKAPAKRAAKSTAAKAGGKAPAKKAPAKRAAKGAAAK
PEDVVTDDLEVTDDLEAEPGEDLDVDDTDLELDDLDTDDDTAVEEDEEEDDAEAVTPAVA
TPKAAEDDIDEPSEKDKASGDFVWDEEESEALRQARKDAELTASADSVRAYLKQIGKVAL
LNAEEEVELAKRIEAGLYATQKLAELAEKGEKLPVQQRRDMQWICRDGDRAKNHLLEANL
RLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMA
DQARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPEELAKEMDITPEKVLEIQQYAREP
ISLDQTIGDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQLQSVLETLSEREAGVVRLRFG
LTDGQPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcgacaaaggcaagcccggcaaccgaagagccggtgaagcgcaccgctaccaag
acccccgccaagaaggccccagccaagcgggcagccaagagcaccgcggcaaaagccggc
ggcaaggcccccgccaagaaggccccggccaagcgggccgccaaaggcgccgcggccaag
cccgaggacgtcgtcaccgacgacctcgaggtgaccgatgatctcgaggctgagccgggc
gaggatctcgacgtcgacgacaccgatctggagctcgacgacctcgacaccgacgacgac
accgccgtcgaggaggacgaggaagaggacgacgccgaagcggtgacccccgccgtcgcg
acgcccaaggccgccgaggacgacatcgacgagccgtccgagaaggacaaggcatcgggc
gacttcgtgtgggacgaggaagagtccgaggcgctgcggcaggcccgcaaagacgccgag
ctgaccgcatcggccgactcggtccgggcctatctcaagcagatcggcaaggtggccctg
ctcaacgccgaagaagaggtggagctggccaagcgcatcgaggccggcctgtacgccacg
cagaagctggccgaactcgccgagaagggcgagaagctgccggtgcagcagcgccgagac
atgcagtggatctgccgggacggcgaccgggcgaaaaaccatctgctggaggcgaacctg
cgcctggtggtgtcgctggccaagcgctacaccggccgcggcatggcgttcctcgacctc
atccaggaaggcaacctgggcctgatccgtgccgtcgagaagttcgactacaccaagggc
tacaagttctcgacctacgccacctggtggatccgccaggccatcacccgcgccatggcc
gaccaggcccgcaccatccgtatcccggtgcacatggtcgaggtgatcaacaagctcggc
cgcatccagcgtgagctgctccaggacctgggccgcgagcccactcccgaggagctcgcc
aaagagatggacatcacgccggaaaaggtgctggagatccagcagtacgcgcgcgagccc
atctcgctggaccagaccatcggcgacgagggcgacagccagctcggtgacttcatcgag
gactccgaggccgtggtcgcggtggacgcggtgtccttcacactgctgcaggatcagctg
cagtcggtgctggagacgctgtccgagcgcgaggccggcgtggttcggctgcggttcggc
ctgaccgacggtcagccgcgcacgctcgacgagatcggccaggtctacggcgtcacgcgt
gagcgcatccgccagatcgagtccaagaccatgtcgaagctgcgccacccgagccgttcc
caggtgctgcgcgactacctggactag
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