Mycolicibacterium goodii: AFA91_32055
Help
Entry
AFA91_32055 CDS
T04008
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mgo
Mycolicibacterium goodii
Pathway
mgo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mgo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AFA91_32055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgo03021
]
AFA91_32055
03400 DNA repair and recombination proteins [BR:
mgo03400
]
AFA91_32055
Enzymes [BR:
mgo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AFA91_32055
Transcription machinery [BR:
mgo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AFA91_32055
DNA repair and recombination proteins [BR:
mgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AFA91_32055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AKS35788
UniProt:
A0A0K0XEF9
LinkDB
All DBs
Position
complement(6842836..6846351)
Genome browser
AA seq
1171 aa
AA seq
DB search
MLEGCILAVSSQSKSNAITNNSVPGAPNRVSFAKLREPLEVPGLLDVQTDSFEWLVGSDR
WRQAAIDRGEENPVGGLEEVLAELSPIEDFSGSMSLSFSDPRFDEVKASVDECKDKDMTY
AAPLFVTAEFINNNTGEIKSQTVFMGDFPMMTEKGTFIINGTERVVVSQLVRSPGVYFDE
TIDKSTEKTLHSVKVIPGRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTNEQIV
ERFGFSEIMMGTLEKDTTSGTDEALLDIYRKLRPGEPPTKESAQTLLENLFFKEKRYDLA
RVGRYKVNKKLGLNAGKPITSSTLTEEDVVATIEYLVRLHEGQTTMTVPGGVEVPVEVDD
IDHFGNRRLRTVGELIQNQIRVGLSRMERVVRERMTTQDVEAITPQTLINIRPVVAAIKE
FFGTSQLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGLEVRDVHPSHYGRMCPIETP
EGPNIGLIGSLSVYARVNPFGFIETPYRKVVDGVVTDQIDYLTADEEDRHVVAQANSPTD
ADGRFTEERVMVRKKGGEVEFVPAAQVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGA
NMQRQAVPLVRSEAPLVGTGMELRAAIDAGDVVVADKTGVIEEVSADYITVMADDGTRQS
YRLRKFARSNHGTCANQRPIVDAGQRVEAGQVIADGPCTQNGEMALGKNLLVAIMPWEGH
NYEDAIILSNRLVEEDVLTSIHIEEHEIDARDTKLGAEEITRDIPNVSDEVLADLDERGI
VRIGAEVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGESGKVIG
IRVFSREDDDELPAGVNELVRVYVAQKRKISDGDKLAGRHGNKGVIGKILPVEDMPFLPD
GTPVDIILNTHGVPRRMNIGQILETHLGWVAKAGWNIDVAGAEGVPDWASKLPEELYSAP
SDSIVATPVFDGAQEAELAGLLGSTLPNRDGEVMVNADGKATLFDGRSGEPFPYPVTVGY
MYILKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYGAAYTLQE
LLTIKSDDTVGRVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVLSSDGAAIEM
RDGDDEDLERAAANLGINLSRNESASVEDLA
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
gtgctggaaggatgcatcttggcagtctctagccagagcaagtcgaacgctatcaccaat
aactccgtcccaggggcaccgaaccgagtttcatttgccaagctccgtgaaccgcttgag
gttccggggctgctcgacgttcagacggattccttcgagtggctggtcgggtccgaccgg
tggcgccaggccgccatcgaccgcggcgaggagaaccccgtaggcggcctcgaagaggtc
ctcgccgagctttcgccgatcgaggatttctcgggctcgatgtcgctgtccttctcggat
ccgcgcttcgacgaggtcaaggcctctgtcgacgagtgcaaagacaaggacatgacgtac
gcggccccgctgttcgtcacggccgagttcatcaacaacaacaccggcgagatcaagagc
cagacggtcttcatgggcgacttcccgatgatgaccgagaagggcaccttcatcatcaac
ggcaccgagcgcgtcgtcgtgtcgcagctcgtccgttcgcccggtgtgtacttcgacgag
accatcgacaagtccaccgagaagacgctgcacagcgtcaaggtgatccccggtcgcggc
gcgtggcttgagttcgacgtcgacaagcgcgacaccgtcggcgtgcgcatcgaccgcaag
cgccgccagccggtcaccgtgctgctcaaggcgctcggctggaccaacgagcagatcgtg
gagcgcttcggcttctccgagatcatgatgggcacgctggagaaggacacgacctccggc
accgacgaggccctgctcgacatctaccgcaagctgcgtccgggcgagccgccgaccaag
gagtccgcgcagaccctgctggagaacctgttcttcaaggagaagcgctacgacctggcc
cgcgtgggccgctacaaggtcaacaagaagctgggcctcaacgcaggcaagccgatcacc
agctcgacgctgaccgaagaggacgtcgtcgcgaccatcgagtacctggtgcgtctgcac
gagggccagaccacgatgaccgtccccggcggcgtcgaggttccggtcgaggtggacgac
atcgaccacttcggcaaccgtcgtctgcgcaccgtcggtgagctgatccagaaccagatc
cgggtgggcctgtcccgcatggagcgggtcgtgcgtgagcgcatgaccacgcaggacgtc
gaggcgatcacgccgcagaccctgatcaacatccgtcccgtcgtggcggcgatcaaggag
ttcttcggcaccagccagctgtcgcagttcatggaccagaacaacccgctgtcgggtctg
acccacaagcgtcgtctctcggcgctgggccccggcggtctgtcccgtgagcgcgccggc
ctcgaggtccgcgacgtgcacccgtcgcactacggccggatgtgcccgatcgagacccct
gagggtccgaacatcggtctgatcggctcgctgtcggtgtacgcccgggtgaacccgttc
ggcttcatcgagacgccgtaccgcaaggtcgtcgacggcgtggtcaccgaccagatcgac
tacctcaccgccgacgaggaggaccgccacgtcgtggcgcaggccaactcgccgaccgat
gcggacggccgcttcaccgaagagcgcgtcatggtccgcaagaagggtggcgaggtcgag
ttcgtccccgccgcgcaggtggactacatggacgtgtcgccgcgccagatggtgtcggtg
gccacggccatgatcccgttcctcgagcacgacgacgccaaccgcgccctgatgggtgcc
aacatgcagcgccaggcggttccgctggtgcgcagcgaggcaccgctggtgggcaccggt
atggagctgcgtgccgcgatcgacgccggtgacgtcgtcgtcgccgacaagaccggcgtc
atcgaagaggtcagcgccgactacatcaccgtcatggccgacgacggcacgcgccagtcg
taccggctgcgcaagttcgcccggtccaaccacggcacgtgcgccaaccagcgtccgatc
gtggacgccggccagcgtgtcgaggcaggccaggtcatcgccgacggcccctgcacccag
aacggtgagatggccctcggcaagaacctgctcgtggcgatcatgccgtgggaaggccac
aactacgaggacgcgatcatcctctccaaccgcctggtcgaagaggacgtgctcacctcg
atccacatcgaagagcacgagatcgatgcccgcgacaccaagctgggcgccgaggagatc
acccgggacatcccgaacgtctccgacgaggtgctggccgacctcgacgagcgcggcatc
gtccgcatcggcgccgaggtccgtgacggcgacatcctggtcggcaaggtcaccccgaag
ggggagaccgagctgaccccggaggagcggctgctgcgcgcgatcttcggtgagaaggcg
cgcgaggtccgcgacacgtcgctgaaggtgccgcacggtgagtccggcaaggtcatcggc
atccgcgtgttctcccgcgaggacgacgacgaactgcctgccggcgtcaacgagctggtc
cgcgtgtacgtcgcacagaagcgcaagatctccgacggcgacaagctcgccggacgccac
ggcaacaagggcgtcatcggcaagatcctgcccgtcgaggacatgccgttcctgcccgac
ggcaccccggtcgacatcatcctgaacacccacggtgtgccgcgtcgtatgaacatcggc
cagatcctggagacccacctcgggtgggtggccaaggccggctggaacatcgacgtggcc
ggcgccgagggtgtgccggactgggcgtccaagctgcccgaggagctgtactcggctccc
tcggacagcatcgtggcgaccccggtgttcgacggtgcccaggaggccgagctcgcgggt
ctgctcgggtcgacgctgccgaaccgcgacggcgaggtcatggtcaacgccgacggcaag
gcgacgctgttcgacggccgcagtggtgaaccgttcccgtacccggtgacggtgggctac
atgtacatcctgaagctgcaccacctggtggacgacaagatccacgcgcgttcgaccggt
ccgtactcgatgatcacccagcagccgctcggtggtaaggcgcagttcggtggtcagcgc
ttcggtgagatggaatgttgggccatgcaggcctacggcgctgcctacaccctgcaggag
ctgctgaccatcaagtccgacgacaccgtgggccgcgtcaaggtgtacgaggcgatcgtc
aagggcgagaacatcccggaacccggtatccccgagtcgttcaaggtgttgctcaaggag
ctgcagtcgctgtgcctcaacgtcgaggtgctctccagcgacggcgcagcgatcgagatg
cgcgacggtgacgacgaggacctggagcgcgctgccgcgaacctgggaatcaacctgtcc
cgcaacgagtccgcgtctgtcgaggaccttgcctag
DBGET
integrated database retrieval system
