Meleagris gallopavo (turkey): 100540634
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Entry
100540634 CDS
T01523
Symbol
PCDH18
Name
(RefSeq) protocadherin-18 isoform X1
KO
K16499
protocadherin delta 2
Organism
mgp
Meleagris gallopavo (turkey)
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mgp04515
]
100540634 (PCDH18)
Cell adhesion molecules [BR:
mgp04515
]
Cadherins
Protocadherins
100540634 (PCDH18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
Syndecan
G1_gp67_N
PepSY
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
100540634
NCBI-ProteinID:
XP_010707799
UniProt:
G1MUT6
LinkDB
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Position
4:complement(8274253..8284348)
Genome browser
AA seq
1142 aa
AA seq
DB search
MNCRSLQTRRAGSKMHFMFLFALAVACLDKAVLGKNLKYRIYEEQRVGSVIARLAEDVAD
VLLKIPNPASVRFRAMQRGNSPLLVVREDNGEISIGAKIDREQLCQKNLNCSIEFDVITL
PTEHLQLFHVEVEVLDINDNSPQFSRALIPIEISESAAVGTRIPLDSAFDPDVGDNSLHT
YSLSDNDFFSIEVRTRTDGAKYAELIVVKELDRELKSSYELQLTASDKGVPQRSGSSLLK
ISISDSNDNSPAFEQQSYIIQLLENSPVGTLLIDLNATDPDEGANGKVVYSFSSHVSPKI
METFRIDSEKGHLTLLKQVDYEITKSYEIDAQAQDMGPNSIPAHCKIIIKVVDVNDNRPE
ISLNLMSPEKEETAYVSEGSPLETFVALVRVQDKDSGVNGEVVCKLHGHGHFKLQKTYEN
NYLILTNASLDREKRSEYSLTVIAEDKGTPSLSTVKHFTVQISDENDNPPRFQTNRYEVV
ILENNSPGAYITSVTATDPDLGDNGQVTYTILENSVLGSSITTYVTIDPSNGAIYALRTF
DHEEVNQIAFMVQARDGGSQQLVSNTTVVLTIIDENDNAPVIVGPALRNSTAEISIPKDA
GIGFLVTRIRATDRDSGMNSELSCSIAADKENSIFVMDPKTCDISINASVESVPTKHWEF
FVIVQDKGSPQLSTKALLKCTVFEYVYSFSSTEATLVSQPSLDVSMITIISLGSICAVLL
VIMVIFATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTVNGTLPIRSH
HRASPSSSPTMERGQMSSRQSHHSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQL
LSMLHQGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRESPID
RLLGEGFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEF
QSPQQQQLQQQQQGLEEDPQPADTSEKKKSFSTFGKDCQGEEESGDTCTSSLLSEMSSVF
QRLLPPSLDAYTECNEMERLNSLERRKGHLPAKAVNYPQGVAAWAASTHFQNPANNGPTL
GTHSSAQPSSKWLPAMEEIPENYEEDDFDNVLNHLSDGKHELMDASELVAEINKLLQDVR
QN
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgaattgcagaagcttacaaacgcggcgggctggcagcaaaatgcactttatgttcctt
tttgcactggcggttgcgtgtctcgataaggctgtgctgggcaagaacctgaagtaccgg
atttacgaggagcagcgggtcggctcggtcatcgccaggctggcggaggacgtggccgat
gttctattgaaaatccccaaccccgcctcggtccgcttccgagccatgcagagggggaac
tccccgcttctcgtcgtccgagaggataacggggagatcagcatcggcgctaagatcgac
cgggagcaactctgccagaaaaacttgaactgctccatcgagttcgacgtgatcactctg
cccaccgagcatctgcagctcttccatgtggaagtggaggtgctggacatcaacgacaac
tcccctcagttttccagggctctcatccccattgaaatatctgagagtgcggcggtgggt
acccgcatccccctggacagtgcttttgacccagatgtgggggacaactccctgcacact
tactccctttccgacaatgattttttcagcatcgaggtgaggacgaggactgatggtgcc
aagtatgcagagcttatcgtggtgaaggagctggaccgggagctgaagtcgagttacgag
ctccagctcactgcatccgataagggggtgccgcagaggtctgggtcttccctcctgaaa
atcagcatttccgactccaatgacaacagcccagcttttgagcagcagtcgtatataatt
caactcctggaaaactccccagtcgggactttgctcatagacctcaatgcgaccgaccca
gatgagggcgctaatgggaaggtcgtgtactcctttagcagtcatgtgtctcccaaaatt
atggagactttcagaatagattcagaaaaaggacatctgacccttctgaagcaagtggac
tatgaaattaccaagtcctatgaaattgatgctcaggctcaagacatgggaccaaattct
attccagctcactgcaaaattataattaaagttgtggatgtgaatgataacagaccggaa
attagcttaaatttgatgtccccagaaaaagaagaaacggcttatgtttctgaggggtcc
cccttggaaacttttgttgccctggtcagggtacaggacaaggactcgggtgtaaatgga
gaggtggtttgcaagctccatggtcatggccactttaaactgcaaaagacttatgaaaat
aactacttaatcttgactaatgccagtctagatagagaaaagagatctgaatacagcttg
actgtaatagcagaggacaagggaacgccaagtctctcgacagtaaaacactttactgtc
caaatcagtgatgaaaatgacaacccaccccgcttccagacaaacagatacgaagtagtt
atcttagaaaataactctccgggagcgtacatcacatctgtcacggccacagacccagat
ctaggggacaatggacaggtgacctacactatactggagaattcagttttgggaagttct
ataaccacttatgtgaccattgatccctccaacggggcaatctatgccttgagaactttt
gaccatgaagaggtaaatcagattgcctttatggttcaagctagggatggagggagccag
caacttgttagtaacactacagtggtgcttaccatcattgatgaaaatgacaatgctcct
gtcattgtgggcccagcactgcgcaacagcacggcggaaatctcaatccctaaagatgct
gggattggctttcttgtcacgaggataagggctacagacagggactccggtatgaactct
gaactcagctgctccatagcagctgacaaggaaaacagcatctttgtgatggatcccaaa
acttgtgacatctccatcaatgcgagtgtagaatcggttccaactaagcactgggagttt
tttgtcatagtccaggataaaggcagtcctcagcttagtactaaagcacttctgaagtgt
acggtttttgagtatgtttattcattttcaagcactgaagctactttggtaagccagccc
tctctggatgtctcgatgatcacaattatatccttaggatcgatatgtgctgtgttgctg
gtcatcatggttatctttgctacgagatgtaatcgagagaaaaaggacaccaggtcctac
aactgccgtgtggcagaatcaacctaccagcaccacccgaagcggccctccagacagatc
cacaaaggggacatcacattggtgccaacagttaacggcacgctacccatccgatctcac
cacagagcttccccgtcctcatccccgaccatggaaagaggacagatgagcagccggcag
agccaccacagccaccaatcgctgaacagcctggtgacaatctcctccaaccacgtgcct
gagaacttctcactggagctcacccacgcaactccagctgttgagcaggtttctcaactc
ctctcgatgcttcaccagggccagtatcaaccaaggccaagttttcgaggaaacaaatat
tccagaagctatagatacgcccttcaagatatggataaattcagcctgaaagacagtggc
cggggtgatagcgaagctggagacagcgattatgatttgggtagagagtctccaattgac
agacttcttggggaaggattcagtgaccttttccttacagatgggagaattcctgcagca
atgcggctgtgcacggaggaatgcagggttctaggccactctgaccagtgctggatgcca
ccgttgccatctccctcatctgattacagaagtaacatgttcatccctggggaggagttt
cagtcaccacagcagcagcagctgcagcagcagcagcagggcctcgaggaagatccgcag
cctgctgacaccagtgaaaagaagaagagcttttcaacgtttggcaaagactgtcagggc
gaggaggaatcaggagacacttgtacctcctctcttctctctgaaatgagcagcgtcttc
cagcgcctgctgcctccctcgctagatgcctacacagaatgcaatgagatggaacgcttg
aattcgttggagcgcagaaagggacatttgcctgccaaggctgtgaattatccacaggga
gtggctgcctgggcagccagcacgcatttccaaaatccagccaacaatgggccaactctg
gggactcactcgagtgcacagccctcctctaaatggctgccagccatggaggaaatcccg
gagaattatgaagaagatgattttgacaatgtactcaatcacctcagtgatggtaaacat
gaactcatggatgccagcgagctggtggcagaaattaacaagctgctgcaagatgtccgg
cagaactaa
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