Meleagris gallopavo (turkey): 100546363
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Entry
100546363 CDS
T01523
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
mgp
Meleagris gallopavo (turkey)
Pathway
mgp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100546363 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgp03019
]
100546363 (CNOT1)
Messenger RNA biogenesis [BR:
mgp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100546363 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100546363 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
Motif
Other DBs
NCBI-GeneID:
100546363
NCBI-ProteinID:
XP_031411264
Ensembl:
ENSMGAG00000001908
LinkDB
All DBs
Position
13:11055774..11082162
Genome browser
AA seq
1607 aa
AA seq
DB search
MAHVCWDSSALRGTENSSSPGSRSAAANTDYLQISEEVKRRDIDCLKLIVTYCLFLTADL
SQVWPEANQNFSKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFN
CMLRNLFEEYRFFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFASK
MYYFGIAALDRFKNRLKDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSI
TTPGSIALAQAQAQAQVPAKAPLAGQVSTIVTTSTTTTVAKTITITRPTGVSFKKDVPPS
INTTNIDTLLVATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPW
VSQYLVMKRVSIEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDR
SLLKNLGHWLGMITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSVRS
VVFRPPNPWTMAIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGSLLKDKDRL
KNLDEQLSAPKKDVKQPEELPPITTTTASTTPATSTTCTATVPPQPQYSYHDINVYSLGG
LAPHITLNPTIPLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFA
LDSEESRMRVAAHHMMRNLTAGMAMITCREPLLMSIATNLKNSFATALRAASPQQRDMME
QAAAQLAQDNCELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQ
AERMPEQIRLKVGGVDPKQLAVYEEFARNVPGFLPTNDLTQPTGFLAQPMKQAWATDDVA
QIYDKCMTELEQHLQSIPHTLAMNPQAQALRSLLEAVVVARNSRDAIAALGLLQKAVEGL
LDATSGADADLLLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVE
LLIRNHLVNMQQYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIE
TLMRINAHSRGNAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLR
EKAEYLLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEI
SYRAQAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGI
VVGVLLQDHEVRQGEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPT
KAPGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQ
ILYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPN
LKVDMLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNR
YNIQLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNA
IANQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIEL
IKNPAFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
4824 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacgtgtgctgggacagcagcgcgctgcgcggcacggagaacagcagctctccc
ggctccaggtcggcggcggccaacacagattatttacagatttctgaagaggtgaagaga
agagacattgactgtctgaagttaattgtgacctattgcctttttttaacagctgactta
tctcaggtgtggccagaggctaatcagaacttcagcaaagaaatagatgatgaggcaaac
agctacttccagcgtatctataaccatccaccacatccaaccatgtctgtagatgaggtc
ttggaaatgctgcagaggtttaaggactccaacattaaacgggaacgagaagtgtttaat
tgcatgctgaggaacttgtttgaggaatatcgtttctttccccagtacccagacaaagag
ctgcacataacagcctgcctgtttggtgggataatagagaaaggactggttacttacatg
gctttgggcctggcccttcgctacgttcttgaagccttacgaaagccttttgcctccaaa
atgtactattttggtattgctgcactagatagatttaaaaatagattgaaggactatccc
cagtactgtcagcacttggcttctattagtcactttatacagttccctcatcacttgcag
gagtacatagaatatggacagcagtctagagatcctcctgtgaaaatgcagggttcaatc
accacccctggcagcattgcacttgcccaggctcaggcccaggcccaggttccagcaaaa
gctcctcttgctggccaagtcagcactatagtaaccacctcaaccaccaccactgttgca
aaaaccatcaccatcactcgaccaacaggagtcagcttcaagaaggatgtgccgccttcc
attaatactaccaacattgatacgctgttagttgcaacagatcaaactgagagaattgtg
gaacctccagagaacgtccaggaaaaaattgctttcatcttcaataatctgtcccagtca
aacatgacacagaaggttgaagaactgaaggaaacagtgaaagaagagttcatgccttgg
gtatcgcagtatctcgtcatgaagcgagtcagtattgagccaaactttcacagcttatat
tcaaacttccttgacactcttaagaatccagaatttaataaaatggttctgaatgaaact
tacagaaacatcaaggtgctactgacatcagataaggctgcagccaacttctccgaccgt
tccttgttaaagaaccttggtcactggctgggaatgattacactggctaaaaataagccc
atcttgcacacggatttggatgtgaagtcactactactggaagcgtatgttaaagggcag
caggaattgctttatgtagtaccatttgttgccaaagtcttagaatccagcgtcaggagt
gtggtcttcaggcctccaaacccgtggacaatggccattatgaatgttttagctgagctg
catcaagaacatgatctaaaattgaatctgaagtttgagatcgaagtgctctgcaagaat
cttgcactggacatcaatgagctgaaacctggaagtctcctgaaagataaggatcgtctt
aaaaatctggatgagcagctgtctgctccaaagaaagatgtgaagcagccagaagagcta
ccacccattacaaccaccactgcttctacaactccagctaccagcaccacttgtacagcc
acggttcctccacagccccagtacagttatcatgacatcaatgtctattccttaggaggg
ttggctccacatattaccttaaatccaacgatcccgctgtttcaggcccacccccagctg
aagcagtgcgtgcggcaggccatagagcgagcggtgcaggagctcgtccatcccgtggtc
gatcgctccattaagattgccatgactacttgtgagcagatagtcaggaaggactttgca
ctggattctgaggagtcacgaatgcgtgtggctgcacaccacatgatgaggaacctgact
gctgggatggccatgatcacctgcagggaacctttgctcatgagcatagctaccaacttg
aagaacagttttgctactgcgctgagggcagcttccccacaacagagggacatgatggag
caagcagctgcccagctggcacaggataactgtgagctggcatgctgctttatccagaag
acagctgtggaaaaagcaggccctgaaatggacaagaggctggcgactgaatttgagctc
agaaaacatgctagacaagagggtcgtcggtactgtgatcctgttgtgttaacttaccaa
gctgaacggatgccagaacagatcaggttaaaggttggaggtgtggacccaaaacagctg
gctgtttatgaagagtttgcacgtaacgtccccggcttcttgcctaccaatgacttaact
cagcctacaggattcttggctcaacctatgaagcaagcttgggccaccgatgatgtagca
caaatctatgacaaatgcatgacagaactggagcagcacctacagtccattccccatact
ctggccatgaatcctcaagctcaagcattgcgcagcctcctggaggctgtggtggttgct
cggaactcccgtgatgccatcgctgcgctcggactgctgcagaaggctgtagagggctta
ctggatgccaccagtggggcagatgctgacctcctgcttcgctaccgtgagtgtcacctg
ctggtgctgaaggctctgcaggacggccgtgcatatggatctccatggtgtaacaagcag
attacgagatgcctgattgaatgtagagatgagtacaagtacaacgtggaagctgtggag
ctgctaatccgcaatcacctggttaacatgcagcagtatgatcttcacctggctcagtca
atggagaacggcttgaactatatggctgtggcatttgccatgcagttggtaaagatcctc
cttgtggatgagagaagtgttgcccatgtaacagaggcagatctgttccacaccattgag
acgctcatgaggattaatgctcattccagagggaatgcaccagaagggttaccccagttg
atggaggtggtccgatcaaactacgaagcgatgattgaccgtgctcacggaggtcccaat
ttcatgatgcattctggaatttcccaagcctcagaatatgatgatccaccaggtctgagg
gagaaggcagaatacctgctgagggagtgggtgaacctctaccattcggctgcagcgggc
cgcgacagcaccaaagcgttctctgcgtttgttggacagatgcaccagcaagggatcttg
aaaacagatgacctgatcacccgctttttccggctttgcactgaaatgtgtgttgaaatc
agctatcgtgcccaggctgaacaacagcacaaccctgctgccaaccccaccatgatccga
gccaagtgctaccacaatctggatgccttcgtgcggctcattgcactgctggtgaagcac
tctggagaagcaaccaacactgtgacaaagatcaacctcctgaacaaggttcttggtatt
gtggtgggagttcttctgcaagaccacgaggttcggcagggtgagttccagcagcttcct
taccatcgcattttcatcatgttgctgttggaattaaatgctcctgagcacgtgttggag
accatcaacttccagacgctcacagcattctgtaacacatttcacatcctgaggcctaca
aaagctccaggttttgtttatgcctggctggaactgatctcccatcggatatttattgca
agaatgctggcacatacaccacagcagaagggttggcctatgtatgcccagttactgatc
gatctcttcaagtacttggctccttttctcagaaatgtggaactcaccaaacctatgcaa
attctttacaagggcactctgcgtgtgttgctggtcttgttgcatgatttcccagaattt
ctttgtgactaccattatgggttctgtgatgtcatcccacctaactgtattcagctaagg
aatttgatcctgagtgccttcccacggaacatgaggcttccagaccctttcacccccaat
ctaaaggtggacatgttgagtgaaattaatattgctccacgaatcctcaccaatttcact
ggagtgatgccacctcagttcaagaaagacttggattcctatctcaaaacccgttctcca
gtcacttttttgtctgacctgcgcagcaacttacaagtatcaaatgaacctggcaaccgc
tacaacatccagctgattaatgccctggtgctctacgtaggcactcaggctattgcgcac
atccacaacaaaggcagcaccccctccatgagcaccattacccactcagcacacatggac
atcttccagaatttggcagtggacctggacaccgaaggtcggtacctcttcttgaatgca
attgccaatcagctgcgataccccaacagtcacacccactacttcagctgcaccatgctt
tacctgtttgcagaggccaacactgaagctatccaggagcagatcacgagggttctcttg
gaacgactgattgtaaataggcctcatccctggggtctcctcattactttcatcgagctg
ataaaaaacccagcatttaagttctggaaccatgaatttgttcactgcgctccagaaatt
gagaagttgttccagtcggttgcacagtgctgcatggggcagaagcaagcccagcaagta
atggaggggactggtgccagttag
DBGET
integrated database retrieval system
