Meleagris gallopavo (turkey): 100548366
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Entry
100548366 CDS
T01523
Symbol
NPHP4
Name
(RefSeq) nephrocystin-4 isoform X1
KO
K16478
nephrocystin-4
Organism
mgp
Meleagris gallopavo (turkey)
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mgp03037
]
100548366 (NPHP4)
Cilium and associated proteins [BR:
mgp03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
100548366 (NPHP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBX2-3_RD
Motif
Other DBs
NCBI-GeneID:
100548366
NCBI-ProteinID:
XP_010721011
Ensembl:
ENSMGAG00000001495
LinkDB
All DBs
Position
23:663105..683588
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AA seq
1384 aa
AA seq
DB search
MAEWERLFAQSRAVPPHTQRRHGVPERSVPFQCVLKCLEGSVVTQQSPAELQLRLSLFDA
AHRHFFGHTWHSSTRTPRSPPGQPPRVLFNEAVYFHTSLSHPSITAVVEVVAVAPTPEGI
SRDVSCGFGLIPLFDSRREPSDLAARGRVLKLYHGTPRALLHPLLQDPLEKNKYMTMMEN
SHLQYTLKLHPPLEKVFHLLPENLLVSGLQKIPGLLPAHGDTGDIFLKPRLMGTVPCYLD
QLCVLLHPSLEEFEEELLEQLHSDRLLKQEVGSALCVQERRLRVGVHNGLRFVQAPQVAV
LQPAAEAARRQTTNPTDSAAEQALLLRSRLQLSEMVAHPAFGVCFQLEYVVCAAAKAAAG
SVLGPAAAMHTVRWALWSPFLGATSSPVLLPLRGGAHPSPGQTLVYRNPADSESSQQVKR
IASGSVQFHVSTDAEHRVTSTDISSKAGKEPEEPPTPSLSLRSPPRPAASTQGPGLSLSQ
LLASPQSRDERAVPRSRSAPKPRPCSTQKDGGTQHTAGITHLEADLWSGSPRVDASSSEH
LRALPFVPAQLPVTAVGPPAGSAALSRASLALLHTSGFPEILDDNKEPVEVTEPLNPAHF
SPRLEEVDALQSNEIILQFLAFSRAPQDALEGMWPSTVFLTFQFYRFPPVTTPRLQLLDA
DGERAVGSAVPAQVLLQLNKDGTPNTEAPGLQLRYVVDPSFLRPGEQRVFVRYLAEHSLQ
MDVWDGDSLLLVGSAAVKLKPLLRQGRPAVRTLHELEVVTTEYEQDAPPAAGRDVLCPLG
ARVAVRGRLHLCLANVGHRCEETPVSPRHPLLSHTHVVSSPGGGCLLSLHASGNVRVSRA
RRLAEVDSELAAILCSHRLEKSPEPLHAPHEAAAIQQHKMQRLAALQQQEDADWRTPQRM
GCCEQCMQYLQIIDAYRERTKHRYISQMLSQAITITHTVYAMLGTAEFFEFALKNPYSVQ
HTVTVEVDHPELSVILDPREWRHFKELTQTATPLEEDMFHLRDDLRPQIYLRPKETVHIP
FRFQMFSAEPAVAAVLGPVGLSKEEDAGRMQEEPRAAQMRLIQVAFRVSGGKPIALLQVK
VEPRPHVVDQTFRFFHPELTFLKKAFRLPPWHTLPGAPVRMPGGDPEVYVRCSDPNVICE
TKNMGPGEPQDVFLKVAGGPSPQIKTFFVAIYTDPWLATPLHIWQFYLHSLQRLDVSCTA
GQLSRLAVPLRGTRTLRRVKAFCSHPHELKVDPAGVFTLPPNGVLDLFVGVRPRRAGSRF
FYLNLVDVECHQLVSSWLLCVTCRQPLISKAFEITIPAGSGKGSNKRITYTNPYPTRRLY
FLVTSRPDLLQFKEDSFQVAGGEVYTIGLRFAPSQSVGEEEILIHINDHQDKNEETFCVK
VIYY
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtgggagcggctgtttgcacagagccgtgctgtcccacctcacacccagcgc
agacacggcgtgccggagcgctcggtgcctttccagtgtgtcctgaagtgcctcgagggt
tctgttgtcacgcagcagtccccagctgagctgcagctccgcctgtctctcttcgatgcc
gcccaccgccacttctttggccacacgtggcacagcagcacccggaccccccgcagcccc
ccagggcagcccccccgtgtgctcttcaatgaggctgtgtattttcacacctcgctcagc
caccccagcatcacagccgtggtggaggtggtggccgtggcccctaccccagaagggatc
tcacgggacgtgtcgtgtggcttcgggctcatcccactgtttgacagcaggcgggagccc
tcagacctggctgccaggggcagagtgctcaagctgtaccacgggacgccacgtgccttg
ctgcacccgcttctccaggaccctctagaaaagaataaatacatgactatgatggagaac
agccacctgcagtacaccctaaagctccacccgcctctggagaaggtatttcacctcctt
cctgaaaaccttctggtgtctggtctgcagaagatccctggcctgctgcctgcacatggg
gacacaggtgacatcttcctgaagccgcggctcatggggacggtcccctgctacctggac
cagctctgtgtgctcctgcacccttctctggaggagtttgaggaagagctgctggagcag
ctgcacagcgaccgcttgctgaagcaggaggttggcagtgcgctgtgcgtgcaggagcgg
cggctgcgtgtcggtgtgcacaacgggctgcgcttcgtccaggccccgcaggtggccgtg
ctgcagccagcagccgaggcggcccggagacaaaccaccaaccccacggacagcgctgca
gagcaggccctgctgctgcggagccgcctgcagctgagtgagatggttgcccatcctgcc
tttggggtctgcttccagctggagtacgttgtctgtgctgcagccaaggctgcagccggc
agcgtgttgggcccagcggctgccatgcacacggtgcgctgggcgctttggagccccttc
ctgggtgccacctcctccccagtgctgctgcccctgcgtggcggtgcccatcccagcccc
ggccagaccctggtgtacagaaaccctgcagacagcgagagctcccagcaggtgaagcgc
attgcgtcgggttctgtccaattccacgtttccactgatgcagaacatcgtgtaacttct
acagacatctcgagtaaagctgggaaggagccggaggagcctcctacgccatcgctgagt
ctacgctcccccccgcgcccggcagcctccacgcagggaccagggctgtctctctcacag
ctgctggcctccccgcagagcagggatgagcgcgcggtgccacgaagccgcagtgccccg
aagccccggccctgcagcacgcagaaggatggcggcacccagcacactgctggcatcaca
cacctggaggctgacctgtggtcgggctccccgcgcgtggatgcctccagcagtgagcac
ctgcgggcgctgccctttgtgccggcgcagctgcccgtcacggccgtggggccgcctgct
gggagcgctgcactcagccgtgcctcgctggcgctcctgcacacctctggcttcccagag
atcctcgatgacaacaaggagcccgtggaggtcacggagccgctgaaccccgcgcatttc
agtcctcggctggaggaagtggatgctctgcaaagcaacgaaataatcctgcagttcctt
gcgttcagtagggctcctcaggatgcactggaagggatgtggccgagcacagtgttcctc
accttccagttctaccgcttcccaccggtcaccacgccacggctgcagctgctcgatgcg
gatggcgagagggcagttgggtctgctgtgccagcacaagtgctgctccagttgaataag
gatgggaccccaaacactgaagccccagggctgcagctgaggtacgtggtggaccccagc
ttcctgaggcctggggagcagcgtgtcttcgtgcgctacctggctgagcacagcctgcag
atggatgtctgggatggagactcgctgctgctggtcggctctgctgcggttaaactgaag
cccctgctgcgccagggccggccggctgtcaggacgctgcatgagctggaagtggtcacc
actgagtacgagcaggatgcaccaccggcagcaggcagggatgtgctgtgtcctctgggt
gcccgcgtggccgtgcgaggccgcctgcacctctgcctggccaacgttggtcaccgctgt
gaggagacccctgtgagccccagacacccactgctgtcccacacccacgttgtgtcctct
ccaggcggtggctgtttgctgtccctgcacgccagtggcaatgtcagggtgtctcgggca
cgcaggctggctgaggtggatagcgagctggcagccattctgtgcagccatcggctggag
aagagcccagaacccctgcatgccccacatgaggctgcagccatccagcagcacaagatg
cagcgcttggcagcgttgcagcagcaggaggatgctgactggaggaccccacaacgcatg
ggctgctgtgagcagtgcatgcagtacctgcagatcatcgatgcctaccgagagcgcacc
aagcaccggtacatctcccaaatgctcagccaggccatcaccatcacccacactgtgtac
gccatgctggggacggctgagttctttgagttcgccctgaagaacccctacagtgtccag
cacacggtgacggttgaggttgaccaccctgagctcagtgtcatcctggacccaagggag
tggcggcacttcaaggagctgacccagacagccaccccgctggaggaggacatgttccac
ctgcgggatgacctcaggcctcagatctacctgcgccccaaggagactgtgcacataccc
ttccgattccagatgttctctgcggagccggctgtcgcagcggtgctgggaccggtgggg
ctgagcaaagaagaggatgcagggaggatgcaggaggagccaagagcagcgcagatgagg
ctcatccaggtggctttccgtgtgagtgggggcaaacccatcgcgctgctgcaggtgaag
gttgagccccggccccacgtggtggatcagaccttccgcttcttccaccccgagctgacc
ttcctgaagaaggccttccgcctgcctccatggcacacgctcccaggtgctccggtgagg
atgccgggcggtgatcctgaggtctatgtccgctgcagtgaccccaatgtcatctgtgag
accaaaaatatgggtcctggggaaccacaggacgtcttcttaaaagtagctggaggacca
agcccgcagatcaaaacattctttgttgctatttatacggatccctggctggccacgccg
ctgcacatctggcagttctacctgcactccctgcagcgtttggatgtcagctgcactgca
gggcagctctcccgcctggccgtcccgctgcgcggcacccgcaccctgcgcagggtgaag
gcgttctgctcccatccccacgagctgaaggtggacccagcaggtgtgttcaccctgccc
cccaatggggtcctggatctgtttgtgggtgtgaggccacgccgggctggcagcagattc
ttctacctcaacctggtggatgtggagtgccaccagctggtgtcctcctggctgctctgc
gtcacctgccgacagcccctcatttccaaggccttcgagatcaccatccctgcaggcagt
gggaagggctccaacaagcgcatcacctacaccaacccctaccccacccgcaggctgtac
tttctggtcaccagccggcccgacttgctgcagttcaaggaggactccttccaggttgct
gggggggaggtgtacaccatcgggctgcgcttcgccccgagtcagagcgtgggtgaggag
gagatcctgatccacatcaacgaccatcaggacaagaacgaggagaccttctgcgtgaag
gtcatctactactga
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