KEGG   Pyricularia oryzae: MGG_04652
Entry
MGG_04652         CDS       T01027                                 
Name
(RefSeq) DNA-directed RNA polymerase II largest subunit
  KO
K03006  DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
Organism
mgr  Pyricularia oryzae
Pathway
mgr03020  RNA polymerase
mgr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mgr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MGG_04652
  09124 Replication and repair
   03420 Nucleotide excision repair
    MGG_04652
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mgr03021]
    MGG_04652
   03400 DNA repair and recombination proteins [BR:mgr03400]
    MGG_04652
Enzymes [BR:mgr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     MGG_04652
Transcription machinery [BR:mgr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     MGG_04652
DNA repair and recombination proteins [BR:mgr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      MGG_04652
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_7 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 FTCD_C EAD4
Other DBs
NCBI-GeneID: 2678092
NCBI-ProteinID: XP_003713642
UniProt: G4MT89
LinkDB
Position
2:1138617..1145570
AA seq 1757 aa
MANLIFAPSSAPLKTIEEIQFGVLAPEEIKNMSVVHVQYPDTMDETRTKPREGGLNDPLL
GTTDRQYKCKTCNNDMNNCPGHFGHIELAKPVYHPGFINKTKKILEMVCHQCSKLLCDEN
NDEQFAQALRLRDPKARFAMVWKACKGKKVCEIETGGKDEKDSIDTATGIEKVPHGGCGS
THPDIRKKALQLYAKVEEAREEGMKKEVKDKLITPEQAHHILKHIPEDDLWKMGLNKDYA
RPEWLIVTVLPVPPPPVRPSISVDGTSQGMRSEDDLTYKLGDIIRANGNVKQAHAEGAPN
HICTEFEELLQYHVATYMDNDIASIPRSLQKSGRPIKSIRARLKGKEGRLRGNLMGKRVD
FSARTVITGDANISLHEVGVPRSIARTLTYPETVTPHNIDRLHQYVVNGPNEHPGAKYIV
RTDGTRIDLRHVKNRGSTQLEYGQKVERHLLTGDYIIFNRQPSLHKESMMGHQVRVMPYS
TFRLNLSVTSPYNADFDGDEMNLHVPQTEETRAEVKELCMVPLNIVSPQRNSPLMGIVQD
TLAGTYKLCRRDVFLTKEAVMDIMLWVPDWDGIIPQPAILRPRPRWTGKQIISMVIPDFV
TTHQGGDWNPLNDDALLIQSGELMFGLLTKKNVGAASGGIIHICYNEQGPARAMAFLNGC
QRVVNYWLLHNGHSIGIGDTIPDPVTIEKIQAHINEQKAEVAELTDLATTNRLEALPGMN
IRETFESKVSKALNTAREKAGTTTEKSLKDINNAVTMSRSGSKGSSINISQMTALVGQQI
VEGKRIPFGFKYRTLPHFTKDDFSPEARGFVENSYLRGLTPSEFFFHAMAGREGLIDTAV
KTAETGYIQRRLVKALEDVAAKYDGTVRNSLGDIIQFIYGEDGLDGMAIEKQKMDHLNIS
NGKFDGMYKLDLMTATRPRELNALEYGNEIFGDPAVQQLLDEEYDAIKADRQLIREINYK
KKDDNDMQLPLNVARVIENAKKLFKIDDAQRSDLKPQDVIPVVKGFLERMVVVPGDDPIS
KEANYNSSILFKAQLRSRLAFKRLAVRERLNRIAFDHVIGEMESRWQRSFVSPGEMVGVL
AAQSIGEPATQMTLNTFHFTGISSKNVTLGVPRLKEILNVSAEIKTPGMVVRLDPKMYPD
FKQENAKTLRSLVEHTNLRSVTAMTEIYYDPEIQTTTIDEDADMLEGHYLIPEEHQDEPS
NQSRWLLRLTLDRQKMLDKNLHIEDVAASIKGAYASDLVVVHSDNNADEQVIRMRHVIKG
DEEDKDGRNIESDQILKRLEEHMLDGLTLRGIKGIERAFLNKDTRLVVKPDGSLLNSKDA
PECEEWYLDTQGTSLRQVLCVDGVDSVRTLTNDLYQIVDLLGIEAARTALLGELTQVLAF
DGSYVNHRHLALLVDVMTYRGSIAAVTRHGINRADTGALMRCSFEETVEILLEAAAIGEL
DDCRGISENVMLGQLAPMGTGAFEVLLDPKMLETVVSNNARMGLMPGLTVKGSSAEGAAT
PYDTGSPMGDSGYNLGMASPTMGNFSPIMSGGSDTPTGFATEYGGGSLGSMNPYGSGTSP
RPTSPFSTSPTSPFSAGYGSYSPTSPMAGYSPTSPMMDGGRYGASSPSFSPSSPSFQPTS
PIMRHGAGDSMGYSPTSPTYQPGSPTGGDNHYSPTSPAQFGASPTSPLYSPASPSFSPGG
ATSPMYYVGSPQHASPTSPNAHYSPTSPSFQRSPAQASPTSPGPYSPTSPSFSPRSPGRN
NRSGGQDSYSPTSPSHD
NT seq 5274 nt   +upstreamnt  +downstreamnt
atggcgaacctcatttttgcgccgtcgtcggcgccactcaagacgatcgaggagatccag
ttcggtgttcttgcgcccgaggagatcaagaacatgagtgtggtacacgtacaatacccc
gataccatggacgagacccgaacaaagccacgagaaggcggtctcaacgatcctcttctt
ggtacgacagatcgacagtacaagtgcaagacatgtaataacgacatgaacaattgtcct
ggtcatttcggtcacatcgaactcgcaaaacccgtttatcatcctggattcatcaacaag
acgaaaaagatcttagaaatggtttgccatcagtgcagcaaactgttgtgtgatgagaac
aacgatgagcaatttgcacaagcccttcggttacgagacccgaaagcgcgattcgccatg
gtttggaaagcttgcaagggcaagaaggtttgcgagattgagactggcggcaaagacgaa
aaggatagcatcgacaccgcaactggcatagaaaaggtcccccacggtggctgtggaagt
acacatcccgacatccggaaaaaggcattgcagctctacgccaaggttgaggaagcccgt
gaggagggaatgaagaaggaggtcaaggacaagctcatcacacccgagcaggctcaccac
attctcaagcatattcccgaagacgacctgtggaagatgggcctgaacaaggactatgcc
agacccgaatggctgatcgtcacggttctgccagtgccaccccctcccgtcaggcccagt
atctcggtcgatggtacatcgcagggaatgcgtagcgaggatgatttgacgtacaagctt
ggcgacattattcgcgcaaacggcaatgtgaagcaggcccatgctgagggagccccgaac
cacatttgcaccgagtttgaggagctgcttcaataccatgtcgccacatacatggacaac
gatatcgcatcaatccctcgatcgttgcagaagagtggtcgtccgattaaatcaatccgc
gctcgtctcaagggtaaagaaggtcgtctgcgaggcaacttgatgggtaagcgtgtggac
ttctccgcacgtacagtcatcacgggtgacgccaacatctctctccatgaggtcggtgtt
cccaggagtatcgctcgtactttgacctaccccgagactgtcacaccgcacaacatcgat
cgtcttcaccagtacgtcgtcaatggcccgaatgagcaccccggtgccaagtacattgtc
aggacggacggtacgcgaattgatctccgacacgtgaagaaccgtggctcgacccagctc
gagtatggccagaaagttgagcgtcatctcttgacgggagactatatcatcttcaaccgc
cagccttcactgcacaaggagtccatgatgggtcatcaagtgcgagtaatgccctactca
actttccgccttaacctttcggtcacgtcaccctacaacgccgatttcgatggtgatgag
atgaatttgcacgtcccacagacggaggagactcgcgcagaggtcaaggagctgtgcatg
gtgccactgaacattgtgtcgcctcagcgaaacagtcccctcatgggtatcgtccaagac
accttggctggtacttacaagctatgtcgtcgtgacgttttcctcacaaaggaagcagtc
atggacattatgctctgggtccctgattgggatggcattattccacagcctgctattctc
cgccccaggccacgatggaccggcaagcagattatcagcatggtcatccccgactttgtg
accactcaccagggtggtgattggaacccgttgaacgatgacgccctcctgatccaatcc
ggcgagctcatgtttggacttttgaccaagaagaatgtcggtgctgcttctggaggtatc
attcacatctgctacaacgagcaaggcccggcaagagccatggctttcctgaatggatgc
caaagggttgtcaactactggctgctccacaacggtcacagtatcggtatcggtgatacg
attcctgaccctgttaccattgagaagattcaagctcatatcaatgagcaaaaggccgaa
gtcgctgagcttactgatcttgctaccaccaacagactggaggctcttcctggtatgaac
atcagagagactttcgaaagtaaagtctccaaggcgctcaacacggcccgtgaaaaggcc
ggtaccacgacggagaagagtttgaaggatatcaacaacgccgttactatgtcgcggtca
ggatccaagggttcgtcgatcaacatttctcagatgactgcactggtcggtcaacaaatt
gttgaaggcaagcgtattccgttcggcttcaagtatcggacgctgccgcacttcaccaag
gatgacttttcacccgaggctcgaggttttgtagagaactcataccttcgtggcctgact
ccttcagagttcttcttccacgctatggctggtcgagagggtctcatcgatacagccgtc
aagactgccgaaacaggttacattcaacgacgtcttgttaaagcgctcgaagatgttgct
gctaaatacgatggaactgttcgcaattccctgggtgacatcatccagtttatctacgga
gaggatggtctcgatggtatggctatcgaaaagcagaagatggaccacctcaacatttca
aatggcaagttcgatggcatgtacaagctggatctcatgaccgcaactcgtcctcgtgag
ctcaatgctctggagtacggtaacgaaatctttggcgatcctgctgtacagcagctgctt
gacgaggaatacgacgccatcaaggcagaccgtcagctcatccgcgagatcaactacaag
aagaaggatgacaacgatatgcagctgcctctcaacgtggcgcgtgtcattgagaacgcc
aagaagctttttaagattgacgacgctcagcgcagtgaccttaagccgcaggatgtcatt
cctgttgtcaagggcttcctggagcgcatggtcgttgtcccgggagatgaccccatctcc
aaggaggccaactacaactcatccatcctgttcaaggcgcagcttcgctctcgccttgcc
ttcaagcgcttagctgtccgcgagcgactgaaccgcatcgcctttgaccacgtcattggt
gagatggagagcaggtggcaacggtcttttgtcagccccggcgagatggttggtgttttg
gccgcacagtccattggcgagcctgccacgcagatgacattgaacacgttccactttact
ggtatttcatctaagaacgtcacgttgggtgtgccgcgtctgaaggaaattctcaacgtt
tcggccgaaatcaagacgcctggcatggtggtacgtctcgaccccaagatgtaccctgat
ttcaagcaggagaacgccaagacgcttcgtagtttggtagaacataccaacctccgttcc
gtgaccgccatgaccgagatttactacgacccggagatccagaccaccacaatcgacgaa
gatgccgatatgctcgaaggacactacctcattccggaggagcatcaggacgagccctcc
aaccagtcgcgctggctcttgcgtctgactctggatcgtcaaaagatgcttgacaagaac
ttacacattgaagacgtagctgccagcatcaagggcgcgtatgcaagtgacctggttgtt
gtgcacagcgacaacaacgccgacgagcaggtcattcgtatgcgtcacgtcatcaaaggt
gacgaggaagacaaggatggaaggaatatcgaatccgaccagattctcaagcgcctagag
gagcatatgcttgacggcctgactctcagaggtatcaagggtattgagcgagcctttttg
aacaaagacacgaggctggttgtcaaaccggatggatctctgctcaacagcaaggacgcg
cccgagtgcgaggaatggtatctggatacacagggaacgtcgctgcgccaggttttgtgc
gttgatggtgtcgacagcgtaagaacgctcaccaacgacctataccagatcgtcgacctt
ctcggtattgaggcagcacgaactgcgctgctgggcgagttgacccaggttctggctttc
gacggttcttatgtcaaccatcgccatcttgcgctgttagtcgatgtcatgacgtaccgt
ggcagcatagcagctgtcacgcgtcacggtatcaaccgtgcagacacgggagcgttgatg
cgttgttcgttcgaggagactgtggagattctgcttgaggcagctgccattggtgaactt
gatgactgtcgcggtatttcagagaacgttatgctcggtcagctggcacccatgggcaca
ggtgcgttcgaggttctgctcgaccccaagatgctcgagacggtcgtttccaacaacgcg
cgcatgggtttgatgcctggcctgacggtcaagggaagctctgctgagggtgctgcgaca
ccttacgatacgggctcaccgatgggcgactctggctacaacctgggcatggcttctccc
accatgggtaacttctcgcctattatgagcggaggttctgatactccgacaggcttcgca
accgagtatggtggtggtagtttgggcagcatgaacccttacggatctggcaccagcccc
aggccaaccagccccttcagcacctcgcccacttcaccattcagtgctggatacggcagc
tattcgccaacttcgccgatggccgggtattctcccacctcgcccatgatggacggcggt
cgctacggtgcttcgtctccttcgttcagcccgtcatcgccctcgttccagccgacatct
cccatcatgcgtcacggtgcgggcgactcgatgggctacagcccgacctctccgacttat
caacctggctcgccgactggtggcgacaatcactactccccaacctcgcccgctcagttc
ggcgcctcacccacatcgcctctgtactcacctgccagccctagcttctccccaggaggt
gccacatcacccatgtactatgttggctcgccacagcacgcgtcacctacctcaccaaac
gcacactactctcccacaagtccgtcattccagaggtcgcccgcacaggcatcgcctacg
agcccagggccctactcgccaacgtctccgtcgttctcgcctagatctcctgggaggaac
aaccgcagtggaggccaagactcatactcaccgacttctccaagccatgattag

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