Pyricularia oryzae: MGG_04652
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Entry
MGG_04652 CDS
T01027
Name
(RefSeq) DNA-directed RNA polymerase II largest subunit
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
mgr
Pyricularia oryzae
Pathway
mgr03020
RNA polymerase
mgr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mgr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MGG_04652
09124 Replication and repair
03420 Nucleotide excision repair
MGG_04652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgr03021
]
MGG_04652
03400 DNA repair and recombination proteins [BR:
mgr03400
]
MGG_04652
Enzymes [BR:
mgr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MGG_04652
Transcription machinery [BR:
mgr03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
MGG_04652
DNA repair and recombination proteins [BR:
mgr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
MGG_04652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
FTCD_C
EAD4
Motif
Other DBs
NCBI-GeneID:
2678092
NCBI-ProteinID:
XP_003713642
UniProt:
G4MT89
LinkDB
All DBs
Position
2:1138617..1145570
Genome browser
AA seq
1757 aa
AA seq
DB search
MANLIFAPSSAPLKTIEEIQFGVLAPEEIKNMSVVHVQYPDTMDETRTKPREGGLNDPLL
GTTDRQYKCKTCNNDMNNCPGHFGHIELAKPVYHPGFINKTKKILEMVCHQCSKLLCDEN
NDEQFAQALRLRDPKARFAMVWKACKGKKVCEIETGGKDEKDSIDTATGIEKVPHGGCGS
THPDIRKKALQLYAKVEEAREEGMKKEVKDKLITPEQAHHILKHIPEDDLWKMGLNKDYA
RPEWLIVTVLPVPPPPVRPSISVDGTSQGMRSEDDLTYKLGDIIRANGNVKQAHAEGAPN
HICTEFEELLQYHVATYMDNDIASIPRSLQKSGRPIKSIRARLKGKEGRLRGNLMGKRVD
FSARTVITGDANISLHEVGVPRSIARTLTYPETVTPHNIDRLHQYVVNGPNEHPGAKYIV
RTDGTRIDLRHVKNRGSTQLEYGQKVERHLLTGDYIIFNRQPSLHKESMMGHQVRVMPYS
TFRLNLSVTSPYNADFDGDEMNLHVPQTEETRAEVKELCMVPLNIVSPQRNSPLMGIVQD
TLAGTYKLCRRDVFLTKEAVMDIMLWVPDWDGIIPQPAILRPRPRWTGKQIISMVIPDFV
TTHQGGDWNPLNDDALLIQSGELMFGLLTKKNVGAASGGIIHICYNEQGPARAMAFLNGC
QRVVNYWLLHNGHSIGIGDTIPDPVTIEKIQAHINEQKAEVAELTDLATTNRLEALPGMN
IRETFESKVSKALNTAREKAGTTTEKSLKDINNAVTMSRSGSKGSSINISQMTALVGQQI
VEGKRIPFGFKYRTLPHFTKDDFSPEARGFVENSYLRGLTPSEFFFHAMAGREGLIDTAV
KTAETGYIQRRLVKALEDVAAKYDGTVRNSLGDIIQFIYGEDGLDGMAIEKQKMDHLNIS
NGKFDGMYKLDLMTATRPRELNALEYGNEIFGDPAVQQLLDEEYDAIKADRQLIREINYK
KKDDNDMQLPLNVARVIENAKKLFKIDDAQRSDLKPQDVIPVVKGFLERMVVVPGDDPIS
KEANYNSSILFKAQLRSRLAFKRLAVRERLNRIAFDHVIGEMESRWQRSFVSPGEMVGVL
AAQSIGEPATQMTLNTFHFTGISSKNVTLGVPRLKEILNVSAEIKTPGMVVRLDPKMYPD
FKQENAKTLRSLVEHTNLRSVTAMTEIYYDPEIQTTTIDEDADMLEGHYLIPEEHQDEPS
NQSRWLLRLTLDRQKMLDKNLHIEDVAASIKGAYASDLVVVHSDNNADEQVIRMRHVIKG
DEEDKDGRNIESDQILKRLEEHMLDGLTLRGIKGIERAFLNKDTRLVVKPDGSLLNSKDA
PECEEWYLDTQGTSLRQVLCVDGVDSVRTLTNDLYQIVDLLGIEAARTALLGELTQVLAF
DGSYVNHRHLALLVDVMTYRGSIAAVTRHGINRADTGALMRCSFEETVEILLEAAAIGEL
DDCRGISENVMLGQLAPMGTGAFEVLLDPKMLETVVSNNARMGLMPGLTVKGSSAEGAAT
PYDTGSPMGDSGYNLGMASPTMGNFSPIMSGGSDTPTGFATEYGGGSLGSMNPYGSGTSP
RPTSPFSTSPTSPFSAGYGSYSPTSPMAGYSPTSPMMDGGRYGASSPSFSPSSPSFQPTS
PIMRHGAGDSMGYSPTSPTYQPGSPTGGDNHYSPTSPAQFGASPTSPLYSPASPSFSPGG
ATSPMYYVGSPQHASPTSPNAHYSPTSPSFQRSPAQASPTSPGPYSPTSPSFSPRSPGRN
NRSGGQDSYSPTSPSHD
NT seq
5274 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacctcatttttgcgccgtcgtcggcgccactcaagacgatcgaggagatccag
ttcggtgttcttgcgcccgaggagatcaagaacatgagtgtggtacacgtacaatacccc
gataccatggacgagacccgaacaaagccacgagaaggcggtctcaacgatcctcttctt
ggtacgacagatcgacagtacaagtgcaagacatgtaataacgacatgaacaattgtcct
ggtcatttcggtcacatcgaactcgcaaaacccgtttatcatcctggattcatcaacaag
acgaaaaagatcttagaaatggtttgccatcagtgcagcaaactgttgtgtgatgagaac
aacgatgagcaatttgcacaagcccttcggttacgagacccgaaagcgcgattcgccatg
gtttggaaagcttgcaagggcaagaaggtttgcgagattgagactggcggcaaagacgaa
aaggatagcatcgacaccgcaactggcatagaaaaggtcccccacggtggctgtggaagt
acacatcccgacatccggaaaaaggcattgcagctctacgccaaggttgaggaagcccgt
gaggagggaatgaagaaggaggtcaaggacaagctcatcacacccgagcaggctcaccac
attctcaagcatattcccgaagacgacctgtggaagatgggcctgaacaaggactatgcc
agacccgaatggctgatcgtcacggttctgccagtgccaccccctcccgtcaggcccagt
atctcggtcgatggtacatcgcagggaatgcgtagcgaggatgatttgacgtacaagctt
ggcgacattattcgcgcaaacggcaatgtgaagcaggcccatgctgagggagccccgaac
cacatttgcaccgagtttgaggagctgcttcaataccatgtcgccacatacatggacaac
gatatcgcatcaatccctcgatcgttgcagaagagtggtcgtccgattaaatcaatccgc
gctcgtctcaagggtaaagaaggtcgtctgcgaggcaacttgatgggtaagcgtgtggac
ttctccgcacgtacagtcatcacgggtgacgccaacatctctctccatgaggtcggtgtt
cccaggagtatcgctcgtactttgacctaccccgagactgtcacaccgcacaacatcgat
cgtcttcaccagtacgtcgtcaatggcccgaatgagcaccccggtgccaagtacattgtc
aggacggacggtacgcgaattgatctccgacacgtgaagaaccgtggctcgacccagctc
gagtatggccagaaagttgagcgtcatctcttgacgggagactatatcatcttcaaccgc
cagccttcactgcacaaggagtccatgatgggtcatcaagtgcgagtaatgccctactca
actttccgccttaacctttcggtcacgtcaccctacaacgccgatttcgatggtgatgag
atgaatttgcacgtcccacagacggaggagactcgcgcagaggtcaaggagctgtgcatg
gtgccactgaacattgtgtcgcctcagcgaaacagtcccctcatgggtatcgtccaagac
accttggctggtacttacaagctatgtcgtcgtgacgttttcctcacaaaggaagcagtc
atggacattatgctctgggtccctgattgggatggcattattccacagcctgctattctc
cgccccaggccacgatggaccggcaagcagattatcagcatggtcatccccgactttgtg
accactcaccagggtggtgattggaacccgttgaacgatgacgccctcctgatccaatcc
ggcgagctcatgtttggacttttgaccaagaagaatgtcggtgctgcttctggaggtatc
attcacatctgctacaacgagcaaggcccggcaagagccatggctttcctgaatggatgc
caaagggttgtcaactactggctgctccacaacggtcacagtatcggtatcggtgatacg
attcctgaccctgttaccattgagaagattcaagctcatatcaatgagcaaaaggccgaa
gtcgctgagcttactgatcttgctaccaccaacagactggaggctcttcctggtatgaac
atcagagagactttcgaaagtaaagtctccaaggcgctcaacacggcccgtgaaaaggcc
ggtaccacgacggagaagagtttgaaggatatcaacaacgccgttactatgtcgcggtca
ggatccaagggttcgtcgatcaacatttctcagatgactgcactggtcggtcaacaaatt
gttgaaggcaagcgtattccgttcggcttcaagtatcggacgctgccgcacttcaccaag
gatgacttttcacccgaggctcgaggttttgtagagaactcataccttcgtggcctgact
ccttcagagttcttcttccacgctatggctggtcgagagggtctcatcgatacagccgtc
aagactgccgaaacaggttacattcaacgacgtcttgttaaagcgctcgaagatgttgct
gctaaatacgatggaactgttcgcaattccctgggtgacatcatccagtttatctacgga
gaggatggtctcgatggtatggctatcgaaaagcagaagatggaccacctcaacatttca
aatggcaagttcgatggcatgtacaagctggatctcatgaccgcaactcgtcctcgtgag
ctcaatgctctggagtacggtaacgaaatctttggcgatcctgctgtacagcagctgctt
gacgaggaatacgacgccatcaaggcagaccgtcagctcatccgcgagatcaactacaag
aagaaggatgacaacgatatgcagctgcctctcaacgtggcgcgtgtcattgagaacgcc
aagaagctttttaagattgacgacgctcagcgcagtgaccttaagccgcaggatgtcatt
cctgttgtcaagggcttcctggagcgcatggtcgttgtcccgggagatgaccccatctcc
aaggaggccaactacaactcatccatcctgttcaaggcgcagcttcgctctcgccttgcc
ttcaagcgcttagctgtccgcgagcgactgaaccgcatcgcctttgaccacgtcattggt
gagatggagagcaggtggcaacggtcttttgtcagccccggcgagatggttggtgttttg
gccgcacagtccattggcgagcctgccacgcagatgacattgaacacgttccactttact
ggtatttcatctaagaacgtcacgttgggtgtgccgcgtctgaaggaaattctcaacgtt
tcggccgaaatcaagacgcctggcatggtggtacgtctcgaccccaagatgtaccctgat
ttcaagcaggagaacgccaagacgcttcgtagtttggtagaacataccaacctccgttcc
gtgaccgccatgaccgagatttactacgacccggagatccagaccaccacaatcgacgaa
gatgccgatatgctcgaaggacactacctcattccggaggagcatcaggacgagccctcc
aaccagtcgcgctggctcttgcgtctgactctggatcgtcaaaagatgcttgacaagaac
ttacacattgaagacgtagctgccagcatcaagggcgcgtatgcaagtgacctggttgtt
gtgcacagcgacaacaacgccgacgagcaggtcattcgtatgcgtcacgtcatcaaaggt
gacgaggaagacaaggatggaaggaatatcgaatccgaccagattctcaagcgcctagag
gagcatatgcttgacggcctgactctcagaggtatcaagggtattgagcgagcctttttg
aacaaagacacgaggctggttgtcaaaccggatggatctctgctcaacagcaaggacgcg
cccgagtgcgaggaatggtatctggatacacagggaacgtcgctgcgccaggttttgtgc
gttgatggtgtcgacagcgtaagaacgctcaccaacgacctataccagatcgtcgacctt
ctcggtattgaggcagcacgaactgcgctgctgggcgagttgacccaggttctggctttc
gacggttcttatgtcaaccatcgccatcttgcgctgttagtcgatgtcatgacgtaccgt
ggcagcatagcagctgtcacgcgtcacggtatcaaccgtgcagacacgggagcgttgatg
cgttgttcgttcgaggagactgtggagattctgcttgaggcagctgccattggtgaactt
gatgactgtcgcggtatttcagagaacgttatgctcggtcagctggcacccatgggcaca
ggtgcgttcgaggttctgctcgaccccaagatgctcgagacggtcgtttccaacaacgcg
cgcatgggtttgatgcctggcctgacggtcaagggaagctctgctgagggtgctgcgaca
ccttacgatacgggctcaccgatgggcgactctggctacaacctgggcatggcttctccc
accatgggtaacttctcgcctattatgagcggaggttctgatactccgacaggcttcgca
accgagtatggtggtggtagtttgggcagcatgaacccttacggatctggcaccagcccc
aggccaaccagccccttcagcacctcgcccacttcaccattcagtgctggatacggcagc
tattcgccaacttcgccgatggccgggtattctcccacctcgcccatgatggacggcggt
cgctacggtgcttcgtctccttcgttcagcccgtcatcgccctcgttccagccgacatct
cccatcatgcgtcacggtgcgggcgactcgatgggctacagcccgacctctccgacttat
caacctggctcgccgactggtggcgacaatcactactccccaacctcgcccgctcagttc
ggcgcctcacccacatcgcctctgtactcacctgccagccctagcttctccccaggaggt
gccacatcacccatgtactatgttggctcgccacagcacgcgtcacctacctcaccaaac
gcacactactctcccacaagtccgtcattccagaggtcgcccgcacaggcatcgcctacg
agcccagggccctactcgccaacgtctccgtcgttctcgcctagatctcctgggaggaac
aaccgcagtggaggccaagactcatactcaccgacttctccaagccatgattag
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integrated database retrieval system