KEGG   Magnetospirillum gryphiswaldense MSR-1: MSR1_08020
Entry
MSR1_08020        CDS       T05662                                 
Symbol
ldc_1
Name
(GenBank) Lysine/ornithine decarboxylase
  KO
K01581  ornithine decarboxylase [EC:4.1.1.17]
Organism
mgry  Magnetospirillum gryphiswaldense MSR-1
Pathway
mgry00330  Arginine and proline metabolism
mgry00480  Glutathione metabolism
mgry01100  Metabolic pathways
mgry01110  Biosynthesis of secondary metabolites
mgry04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:mgry00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00330 Arginine and proline metabolism
    MSR1_08020 (ldc_1)
  09106 Metabolism of other amino acids
   00480 Glutathione metabolism
    MSR1_08020 (ldc_1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    MSR1_08020 (ldc_1)
Enzymes [BR:mgry01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.17  ornithine decarboxylase
     MSR1_08020 (ldc_1)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: AVM73305
LinkDB
Position
complement(794793..796022)
AA seq 409 aa
MSHIRSRFTITPSRRSFESRRAIFVEDVVRTRRPDAPLHCLRPATLRAAAATFVGGFPGT
TLYAVKCNPDPAVLRALWDGGVRHFDCASAGEVALVRHTLPRAQIHFMHPIKARSAIREA
WERHDVRDFVVDSAAELGKVIEETRHRPGRLGIIVRLALPKGSARYDLSGKFGADRDDAV
ALLRMAAAVAGRVGISFHVGSQCCDPAAWTRALDLTAEVLAAYGRPVDIVDVGGGFPVSY
PDVTPPPLADFFAAIAAGFARLNLPAATQLWCEPGRALVAPGQSLVVRIEGRRGDMLYIN
DGIYGSLSDAGAPGFRFPCRLIRLNGESVAADQPFAFFGPTCDSADRMNGPFLLPADSRE
GDWIEIGQLGAYGASLRTGFNGFDLVLSAEVDDAPLLSTPGFGPMAMAA
NT seq 1230 nt   +upstreamnt  +downstreamnt
atgagccatattcgttcccgtttcaccatcacgccgtcgcgccgtagctttgaatcccgc
cgcgccatcttcgtcgaagacgtggtgcgcacccgccgccccgacgcgcccctgcattgc
ctgcgcccggccaccctgcgtgccgccgccgccacctttgtcggcggttttcccggcacc
acgctttacgcggtcaagtgcaatcccgatcctgcggtgctgcgggcgttgtgggatggc
ggcgtgcgccatttcgattgcgcctcggccggtgaggtggcgctggtgcgccacaccctg
ccgcgcgcccagatccatttcatgcatccgatcaaggcccgcagtgccatccgcgaagcc
tgggaacgccatgacgtgcgcgatttcgtcgtcgacagcgccgccgaactgggcaaggtg
atcgaggaaacccgtcatcgccccggtcgcctgggtatcatcgtccgtctggccctgccc
aagggcagtgcccgctatgacctgtcgggcaagttcggcgccgacagggacgacgccgtg
gccctgctgcgcatggccgctgccgtcgccggacgggtcggcatcagcttccatgtgggc
agccaatgctgcgaccccgctgcctggacccgtgccctggatttgaccgccgaggtgttg
gccgcctatgggcgcccggtcgatatcgtcgatgtcggcggcggttttccggtcagctat
cccgacgtgacgccgccgcctttggccgatttcttcgccgccatcgctgccggcttcgcc
cgcctgaacctgcccgccgccacccaattgtggtgcgagccgggccgcgccctggtagcg
ccggggcagtcgctggtggtgcgcatcgagggccgccgcggcgacatgctgtacatcaat
gacggtatttacggcagcctgtcggatgcgggcgcccccggcttccgctttccctgccgg
ttgatccggctgaacggcgaatccgtcgccgctgaccaaccctttgcctttttcggcccc
acctgcgattccgccgatcgcatgaacgggcctttcctgttgccggcggattcccgtgag
ggtgattggatcgaaatcggacagttgggagcctatggcgccagtttgcgcaccggcttc
aacggcttcgacctggtgctgagcgccgaggtcgatgacgcccccctgctgtccacccca
ggctttggccccatggccatggccgcctga

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