Magnetospirillum gryphiswaldense MSR-1: MSR1_08020
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Entry
MSR1_08020 CDS
T05662
Symbol
ldc_1
Name
(GenBank) Lysine/ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
mgry
Magnetospirillum gryphiswaldense MSR-1
Pathway
mgry00330
Arginine and proline metabolism
mgry00480
Glutathione metabolism
mgry01100
Metabolic pathways
mgry01110
Biosynthesis of secondary metabolites
mgry04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mgry00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
MSR1_08020 (ldc_1)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
MSR1_08020 (ldc_1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
MSR1_08020 (ldc_1)
Enzymes [BR:
mgry01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
MSR1_08020 (ldc_1)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AVM73305
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Position
complement(794793..796022)
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AA seq
409 aa
AA seq
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MSHIRSRFTITPSRRSFESRRAIFVEDVVRTRRPDAPLHCLRPATLRAAAATFVGGFPGT
TLYAVKCNPDPAVLRALWDGGVRHFDCASAGEVALVRHTLPRAQIHFMHPIKARSAIREA
WERHDVRDFVVDSAAELGKVIEETRHRPGRLGIIVRLALPKGSARYDLSGKFGADRDDAV
ALLRMAAAVAGRVGISFHVGSQCCDPAAWTRALDLTAEVLAAYGRPVDIVDVGGGFPVSY
PDVTPPPLADFFAAIAAGFARLNLPAATQLWCEPGRALVAPGQSLVVRIEGRRGDMLYIN
DGIYGSLSDAGAPGFRFPCRLIRLNGESVAADQPFAFFGPTCDSADRMNGPFLLPADSRE
GDWIEIGQLGAYGASLRTGFNGFDLVLSAEVDDAPLLSTPGFGPMAMAA
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgagccatattcgttcccgtttcaccatcacgccgtcgcgccgtagctttgaatcccgc
cgcgccatcttcgtcgaagacgtggtgcgcacccgccgccccgacgcgcccctgcattgc
ctgcgcccggccaccctgcgtgccgccgccgccacctttgtcggcggttttcccggcacc
acgctttacgcggtcaagtgcaatcccgatcctgcggtgctgcgggcgttgtgggatggc
ggcgtgcgccatttcgattgcgcctcggccggtgaggtggcgctggtgcgccacaccctg
ccgcgcgcccagatccatttcatgcatccgatcaaggcccgcagtgccatccgcgaagcc
tgggaacgccatgacgtgcgcgatttcgtcgtcgacagcgccgccgaactgggcaaggtg
atcgaggaaacccgtcatcgccccggtcgcctgggtatcatcgtccgtctggccctgccc
aagggcagtgcccgctatgacctgtcgggcaagttcggcgccgacagggacgacgccgtg
gccctgctgcgcatggccgctgccgtcgccggacgggtcggcatcagcttccatgtgggc
agccaatgctgcgaccccgctgcctggacccgtgccctggatttgaccgccgaggtgttg
gccgcctatgggcgcccggtcgatatcgtcgatgtcggcggcggttttccggtcagctat
cccgacgtgacgccgccgcctttggccgatttcttcgccgccatcgctgccggcttcgcc
cgcctgaacctgcccgccgccacccaattgtggtgcgagccgggccgcgccctggtagcg
ccggggcagtcgctggtggtgcgcatcgagggccgccgcggcgacatgctgtacatcaat
gacggtatttacggcagcctgtcggatgcgggcgcccccggcttccgctttccctgccgg
ttgatccggctgaacggcgaatccgtcgccgctgaccaaccctttgcctttttcggcccc
acctgcgattccgccgatcgcatgaacgggcctttcctgttgccggcggattcccgtgag
ggtgattggatcgaaatcggacagttgggagcctatggcgccagtttgcgcaccggcttc
aacggcttcgacctggtgctgagcgccgaggtcgatgacgcccccctgctgtccacccca
ggctttggccccatggccatggccgcctga
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