Magnetospirillum gryphiswaldense MSR-1: MSR1_16940
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Entry
MSR1_16940 CDS
T05662
Symbol
glgX
Name
(GenBank) Glycogen debranching enzyme
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
mgry
Magnetospirillum gryphiswaldense MSR-1
Pathway
mgry00500
Starch and sucrose metabolism
mgry01100
Metabolic pathways
mgry01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
mgry00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
MSR1_16940 (glgX)
Enzymes [BR:
mgry01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
MSR1_16940 (glgX)
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
DUF3459
Motif
Other DBs
NCBI-ProteinID:
AVM74186
LinkDB
All DBs
Position
complement(1773988..1776117)
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AA seq
709 aa
AA seq
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MPHRRRIWPGSPYPLGATWDGNGVNFALFSAHAEAVELCLFDHNGREVERIHLPEYTDQV
WHGYLPEARPGLLYGYRVHGPYDPSEGHRFNAAKLLIDPYAKALSGQLLWSDTHFGFKLG
NPRADLVIDKRDNARFMPKCRVVDTAFTWGDDRRPNRPWAETVIYEAHVRGFTMKHPHVP
TQHRGTFLGLSHPAVVDYLVKLGVTAVELLPVHAIVDERHLIDQGLRNYWGYNPIGFFAA
DPRYYGASSHGDFKTMVGRLHDAGIEVILDVVYNHTAEGNHLGPTLSYKGIDNASYYRLM
PGQPEHYENYSGCGNTLQLSHPRVLQMVMDSLRYWVEDMHVDGFRFDLAASLAREKSGFD
GGSGFLDAVRQDPVLSRVKLIAEPWDIGGDGYRLGAFPPGWSEWNGQYRDSVRRFWRGDG
GLIGDLASRLTGSSDLFGWGGRRPWASMNFVTCHDGFTMADLVAYEKKRNDANMEGNRDG
TDANYSWNCGIEGPTEQPKVRALRTQQMRNLMATLLLSQGVPMILAGDEFGRSQGGNNNA
YCQDNDISWIDWDDQDQIMLDFVRRLIKLRRDHPVFSRPRFFNGVRRPGQAIKDITWVTP
EGLEMSDADWAMPYARSLGCVLGGDSDEIQAHTAGGQADDTFMLLMNAYTEIIFYTLPPP
QLALAWEVVIDTARMDSIRADETCAAGSRFPVKPHSLAVLRRRNDPSAQ
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatcgccgtcgtatctggcccggttccccctatcctctgggtgccacctgggat
ggcaacggcgtcaatttcgccctgttctcggcccatgccgaagcggtggaattgtgcctg
ttcgaccataacggccgcgaggtcgagcgcatccatctgcccgaatacaccgatcaggtc
tggcacggctatctgcccgaggcgcggcctggcctgctgtacggttatcgcgtccacggc
ccctacgatccgagcgaagggcatcgcttcaacgccgccaagctgctgatcgacccttac
gccaaggcgctctccgggcaattgctgtggtcggacacccatttcggcttcaagctgggc
aatccgcgcgccgatctggtcatcgacaagcgcgacaatgcccgtttcatgcccaaatgt
cgggtggtggacaccgccttcacctggggcgacgaccgccgccccaatcggccttgggcg
gaaacggtgatctacgaggcccatgtgcgcggcttcaccatgaagcatccgcatgtgccg
acccagcatcgcggcaccttcctggggctgtcgcatccggcggtggtggattatctggtg
aaactgggcgtcaccgcggtggaattgctgccggttcacgccatcgtcgatgagcgtcat
ctgatcgaccagggtctgcgtaattattggggctataaccccatcggctttttcgccgcc
gatccgcgctattacggcgcctcgtcccacggtgatttcaagaccatggtcgggcgtctg
cacgatgccggcatcgaggtgattttggatgtggtctacaaccacaccgccgagggcaat
catctggggccgacgctcagctacaagggcatcgacaatgccagctattaccggctgatg
ccgggccagcccgagcattacgaaaactattccggctgcggcaacaccctgcaattgtcc
catccgcgcgtgttgcagatggtcatggattccttgcgctattgggtcgaggacatgcat
gtggacggcttccgcttcgatctggcggcgtcgttggcgcgggagaaatccggtttcgac
ggcggttccggctttttggacgcggtgcgccaagacccggtgctctcaagggtcaagctg
atcgccgagccctgggatatcggcggcgacggctatcgtctgggtgcctttccgcccggc
tggtcggaatggaatggacagtatcgcgacagcgtgcggcggttctggcgcggcgatggc
ggtctgatcggcgatctggcctcgcgcctgaccggctccagcgacctgttcggctggggc
gggcggcgaccctgggccagcatgaatttcgtcacctgccatgacggcttcaccatggcc
gatctggtcgcctacgagaaaaagcgcaacgacgccaacatggaaggcaaccgcgacggg
acggatgccaattattcgtggaattgcggcatcgagggcccgaccgagcagcccaaggta
cgtgcgctgcggacccaacagatgcgcaacctgatggcgactttgttgctgtcgcaaggg
gtgccgatgatcctggccggcgacgagttcgggcgcagccagggcggcaacaacaacgcc
tattgccaggacaacgacatttcctggatcgattgggacgatcaggaccagatcatgctg
gatttcgtccgccggctgatcaaattgcggcgcgaccacccggtgttcagccgtccgcgc
tttttcaacggcgtgcgccggcccggtcaggccatcaaggacatcacctgggtgacgccg
gaaggcctggaaatgagcgatgccgattgggccatgccctatgcccgctcgttgggctgc
gtgctgggcggcgacagcgacgaaatccaggcgcataccgccggcgggcaggccgacgat
accttcatgctgctgatgaacgcctataccgagatcatcttctacaccctgccgccgccg
caattggcgctagcttgggaggtggtgatcgacaccgcgcggatggattccatccgggcg
gacgaaacctgtgccgccggcagccgttttccggtcaagccccattcgctggcggtgttg
cgccggcgcaatgacccatccgctcaataa
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