KEGG   Moraxella haemolytica: LU276_04350
Entry
LU276_04350       CDS       T09918                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
mhac  Moraxella haemolytica
Pathway
mhac02024  Quorum sensing
mhac03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mhac00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LU276_04350 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LU276_04350 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mhac03019]
    LU276_04350 (hfq)
   03036 Chromosome and associated proteins [BR:mhac03036]
    LU276_04350 (hfq)
Messenger RNA biogenesis [BR:mhac03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     LU276_04350 (hfq)
Chromosome and associated proteins [BR:mhac03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    LU276_04350 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: WII96048
LinkDB
Position
929418..930044
AA seq 208 aa
MSKGQSLQDPFLNALRKDRIPVSIFLVNGIKLQGQIESFDQYVVLLKNTVSQMVYKHAIS
TIVPTRNPRTDSVVPSGPQSGYPNASIGVMSSSSYQTSVASGNASTGFERQTGFGTRPVG
GFTRTPPLDNFGSRGFERGGYPQGNGMNAGFDRAAFDERGFDGKNFEKKQSRSIERGGFD
DKGFSAKGFDERGFDAKFGHNNDEGFDN
NT seq 627 nt   +upstreamnt  +downstreamnt
atgtcaaaagggcaaagtttgcaagacccatttttgaatgcacttcgtaaagaccgcatt
cctgtctctatttttttggttaatggtattaaattacaaggacaaatcgaatcatttgac
caatatgtcgttctcttaaaaaacacggtcagtcaaatggtttataagcacgccatctca
accattgttccaacccgtaaccctcgtacagatagcgttgtgccatcaggtcctcagtca
ggctatccaaacgcctctatcggtgtgatgtcatcaagtagctatcaaactagcgtggca
tcaggcaatgcgagtacaggctttgaacgccaaacaggttttggtactcgtcctgtagga
ggatttacacgcacgccaccattggataacttcggctctcgtggatttgagcgtggtggc
tacccacagggtaatggcatgaatgcaggctttgaccgtgctgcctttgatgagcgtggc
tttgatggcaaaaactttgaaaaaaagcaaagtcgtagcattgagcgtggcggttttgat
gacaagggttttagtgctaaaggctttgatgaaagaggctttgatgctaaatttggccac
aataatgacgaaggttttgataactga

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