Mannheimia haemolytica D153: F382_00100
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Entry
F382_00100 CDS
T02746
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
mhae
Mannheimia haemolytica D153
Pathway
mhae03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mhae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F382_00100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhae03400
]
F382_00100
DNA repair and recombination proteins [BR:
mhae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F382_00100
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F382_00100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
nSTAND1
AAA_16
RsgA_GTPase
AAA_22
nSTAND3
BCA_ABC_TP_C
DnaJ_CXXCXGXG
AAA_21
AAA_23
AAA_25
NACHT
cobW
Motif
Other DBs
NCBI-ProteinID:
AGQ24498
LinkDB
All DBs
Position
16182..19010
Genome browser
AA seq
942 aa
AA seq
DB search
MQHIDIRGARTHNLKNINLTLPRDKFIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTVTEIHDYLRLLFARVGEPRC
PDHDVPLAAQTISQMVDRVLEEPEGKRLMLLAPVVKERKGEHVKLLENLTASGYLRARID
GEICDLSDPPALELQKKHTIEVVVDRFKVRADLATRLAESFETALDLSGSTAIIADMDDP
NAEEIVFSSSFACPHCGYSLHELEPRLFSFNNPAGACPTCDGLGVEQFFDAKKVVQNEEV
SLAAGAIKGWDRRSFYYFGLLKAVAEHYGFDLETPFGQLPKKYQNIILNGTKEEIEFVYV
NDRGDKVKRKHAFEGVLNNMARRYKETESNSVREELAKYINNRPCMDCEGSRLRREARYV
FLDKTNLPMVSEKSIGEALTFFEELKLAGQKEKIAEKILKEIRERLQFLVNVGLNYLSLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLVHLRNLGNTV
IVVEHDEDAIRAADHIVDIGPGAGVHGGQVIAQGTAAEIMQIEESITGQFLSGKQKIEIP
AQRVPYEPTKLLTLSGASGNNLKKVKLEIPVGLFTCITGVSGSGKSTLVNDTLFPLAQNA
LNRAENSDVAPYESIDGLSHFDKVIDIDQSPIGRTPRSNPATYTGLFTPIREIFAGTQEA
RARGYNVGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDHCKGKRYNRETLEIRYK
GKTIHQVLEMTVEEAREFFAPMPMIARKLQTLMDVGLSYIRLGQSSTTLSGGEAQRVKLA
TELSKRDTGKTLYILDEPTTGLHFADIKQLLGVLHRLRDQGNTIVVIEHNLDVIKTADWI
VDLGPEGGSGGGEIIATGTPEEVAKDKRSHTARFLKEILAKG
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgcaacatatcgatattcgtggagcaagaacacacaacttaaaaaacatcaatttaacc
ttgccgagagataaattcattgtaattaccgggctttccggctcgggcaaatcgtctctg
gcgtttgatacgctctatgcggaaggacaacgccgttatgtagaatcactgtctgcatac
gcccgccagtttctctccttaatggaaaagcctgatgtggatcatattgaagggctttcc
cctgcgatttcgattgagcaaaaatcaacctctcacaacccacgttcgaccgtaggaacg
gtaacggaaattcacgactatttacgtttattgtttgctcgagtgggcgagcctcgttgc
cctgaccacgatgtgccattggctgctcaaactatttcgcagatggtggatcgagtattg
gaagaaccggaaggaaaacggttgatgctacttgcccctgtggtgaaagagcgtaaaggc
gaacacgtaaaattattggaaaatttgaccgctagtggctatttgcgggctagaattgac
ggtgaaatttgcgatttatccgacccaccggcattagaattacagaaaaaacacaccatt
gaagtggtggtggatcgctttaaagtaagggctgatctagccacccgtttggcggaatct
tttgaaacagcgttagatttatccggctctaccgcaattattgcagatatggacgaccca
aatgccgaagaaattgtgttttcgtccagctttgcttgtccgcattgtggttactcttta
cacgaattagaaccacgccttttctcgtttaacaacccggcaggtgcttgcccgacttgt
gatggtttgggcgttgagcagttttttgatgccaaaaaagtagtgcaaaatgaagaggtt
tcattagccgccggtgcgatcaaaggctgggatcgccgcagtttctactattttggctta
ttaaaagccgttgccgagcattatggctttgatttagaaaccccattcgggcagctaccg
aaaaaatatcaaaacattattttaaacggcactaaagaagagattgagtttgtttatgtc
aatgaccgaggcgataaggtcaaacgtaaacacgcttttgaaggggtgctgaataatatg
gctcgccgctataaagaaaccgaatcaaactcggtgcgtgaagagttggcgaagtatatt
aataatcgtccttgtatggattgcgaaggctcacggttacgccgtgaagcccgttatgta
ttcttagataaaaccaatttgccgatggtttcggaaaaaagtatcggcgaggcattaacc
ttttttgaagagctgaaattagccggtcagaaagaaaaaattgctgagaaaatcctcaaa
gaaattcgtgaacggctacagtttttagtgaatgtcggcttgaattatctttctctttcc
cgctcggcagaaaccctttcaggtggcgaggctcagcggattcgccttgccagccaaatt
ggtgcgggtttagtaggggtaatgtatgtgctggatgagccttccatcggcttgcaccaa
cgagacaatgaacgcctactgaatactttggtgcatttacgcaatttaggcaataccgtg
attgtggttgaacacgatgaagatgcgatccgagccgcagatcatatcgtggatataggc
ccgggtgccggtgtacacggtgggcaagttatcgcacaaggtacggcagctgaaattatg
caaattgaggaatctattaccggacaattcctctcaggcaagcaaaaaattgagattccg
gctcagcgtgtgccttatgagccaactaaattgctcaccttatcgggagcaagtggtaac
aacttgaaaaaagtgaaattagagattccggttggtttatttacttgtatcacgggtgta
tcaggttcgggcaaatcaactttagttaatgacacactattccctctggcacagaatgcg
ttaaaccgagcggaaaacagcgatgttgctccttatgaatcgattgacggcttatcgcat
tttgacaaggtaattgatattgaccaaagcccgattgggagaactcctcgctcaaatccg
gcaacttacaccggattatttacgccaattcgtgagatttttgccggcacgcaagaagct
cgagccagagggtataacgtagggcggtttagctttaatgtgcggggcggacgttgcgaa
gcctgtcaaggtgacggcgtgattaaagttgaaatgcacttcttgcctgatgtgtatgtg
ccttgcgatcactgtaaaggcaaacgctataaccgtgaaaccttggaaattcgctataaa
ggcaaaactattcaccaagtgttagagatgacggtggaagaggcgagagaattttttgcc
cctatgccgatgattgcccgcaagttgcaaaccttgatggacgtggggttatcttatatc
cgtttagggcaatcttctactacgctctcaggcggtgaagcccaacgggtgaaattggcg
accgagctttccaaacgagacaccggcaaaacgctctatattttagatgaaccgaccacc
ggcttgcattttgccgatattaaacagttactcggcgtgctacatcgcctgcgtgatcaa
ggcaatacgattgtggtgatcgaacataatttagatgtgattaaaaccgcagactggatt
gtcgatcttggccctgaaggtggcagtggcggcggtgaaattattgctaccggcacaccg
gaagaagtggcaaaagacaaacgttctcacaccgcacgcttcttaaaagagattttggct
aaaggctaa
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