Mycobacterium hainanense: ACEL92_23055
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Entry
ACEL92_23055 CDS
T11348
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mhaf Mycobacterium hainanense
Pathway
mhaf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mhaf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACEL92_23055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhaf03021
]
ACEL92_23055
03400 DNA repair and recombination proteins [BR:
mhaf03400
]
ACEL92_23055
Enzymes [BR:
mhaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACEL92_23055
Transcription machinery [BR:
mhaf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACEL92_23055
DNA repair and recombination proteins [BR:
mhaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACEL92_23055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
RnfC_N
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
XGI09239
LinkDB
All DBs
Position
complement(4902667..4906188)
Genome browser
AA seq
1173 aa
AA seq
DB search
MADSRQSKTDRPQSSSNGSSLNSSVPGAPNRVSFAKLREPLEVPGLLDVQIDSFEWLIGS
PRWREAAIDRGEPSPVGGLEEVLYELSPIEDFSGSMSLSFSDPRFDEVKAPVDECKDKDM
TYAAPLFVTAEFINNNTGEIKSQTVFMGDFPMMTEKGTFIINGTERVVVSQLVRSPGVYF
DETIDKSTEKLLHSVKVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTNEQ
IHERFGFSEIMMSTLEKDNTAGTDEALLDIYRKLRPGEPPTKESAQTLLENLFFKEKRYD
LARVGRYKVNKKLGLHAGEPITSSTLTEEDVVATIEYLVRLHHARTDGQAAVMTVPGGIE
VPVETDDIDHFGNRRLRTVGELIQNQIRVGMSRMERVVRERMTTQDVEAITPQTLINIRP
VVAAIKEFFGTSQLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGLEVRDVHPSHYGR
MCPIETPEGPNIGLIGSLSVYARVNPFGFIETPYRKVVDGVVTDEIHYLTADEEDRHVVA
QANSPIDANGRFEESRVLVRRKAGEVEYVPSSEVDYMDVSPRQMVSVATAMIPFLEHDDA
NRALMGANMQRQAVPLVRSEAPLVGTGMELRAAIDAGDVVVADKAGVIEEVSADYVTVMA
DDGTRHTYRMRKFERSNHGTCANQSPIVDAGDRVEAGQVIADGPCTENGEMALGKNLLVA
IMPWEGHNYEDAIILSNRLVEEDVLTSIHIEEHEIDARDTKLGAEEITRDIPNVSDEVLA
DLDERGIVRIGAEVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHG
ESGKVIGIRVFSREDDDELPAGVNELVRVYVAQKRKISDGDKLAGRHGNKGVIGKILPVE
DMPFLPDGTPVDIILNTHGVPRRMNIGQILETHLGWVAKSGWNIEGSPEWAANLPKELQS
AEPNAIVSTPVFDGAREAELQGLLSCTLPNRDNEVMVDGDGKAVLFDGRSGEPFPYPVTV
GFMYIMKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYGAAYTL
QELLTIKSDDTVGRVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVLSSDGAAI
ELREGEDEDLERAAANLGINLSRNESASVEDLA
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
ttggctgattcccgccagagcaaaacggatcgcccacaaagttcctctaatggaagttcc
ctaaacagctccgtccccggagcgcccaaccgagtttccttcgccaagctccgcgaaccg
ctcgaggttcccggcctgctcgacgtgcagatcgactctttcgagtggttgatcggctca
ccgcgctggcgcgaggccgccatcgatcgtggcgagcccagccccgtgggcggcctcgaa
gaggtgctgtacgagctctcgccgatcgaggacttctccggctcgatgtcgctgtcgttc
tccgacccccgtttcgacgaggtcaaggcgccggtcgacgagtgcaaagacaaggacatg
acgtacgcggccccgctgttcgtcacggccgagttcatcaacaacaacaccggcgagatc
aagagccagacggtgttcatgggtgacttcccgatgatgaccgagaagggcaccttcatc
atcaacgggaccgagcgtgtggtcgtcagccagctggtgcgctcgccgggcgtgtacttc
gacgagaccatcgacaagtcgaccgagaagctgctgcacagcgtcaaggtgatccccagc
cgcggtgcgtggctggagttcgacgtcgacaagcgcgacaccgtcggtgtgcgcatcgac
cgcaagcgccgccagcccgtcaccgtgctgctcaaggcgctgggctggaccaacgagcag
atccacgagcggttcggcttctccgagatcatgatgagcacgctggagaaggacaacacg
gcgggcaccgacgaggcgctgctggacatctaccgcaagctgcgcccgggcgagccgccg
accaaggagtccgcgcagaccctgctggagaacctgttcttcaaggagaagcgctacgac
ctggcccgcgtcggccgctacaaggtcaacaagaagctgggcctgcacgccggcgagccg
atcacgtcgtccacgctgaccgaggaagacgtcgtcgcgaccatcgaatacctggtgcgc
ctgcaccacgcccgtacggatggccaggccgctgtcatgactgtccccggcggcatcgag
gtgccggtggagaccgacgacatcgaccacttcggtaaccgccgcctgcgcacggtcggt
gagttgatccagaaccagatccgggtcggcatgtcgcggatggagcgcgtggtccgcgag
cggatgaccactcaggacgtcgaggcgatcacgccgcagacgctgatcaacatccgcccg
gtggtcgccgcgatcaaggagttcttcggcaccagccagctctcacagttcatggaccag
aacaacccgctgtcgggcctgacccacaagcgccgcctgtcggcgctgggccccggcggt
ctgtcccgtgagcgggccgggctggaggtccgcgacgtgcacccgtcgcactacggccgg
atgtgcccgatcgagaccccggaggggccgaacatcggtctgatcggctcgctgtcggtg
tacgcccgggtcaacccgttcggcttcatcgagacgccgtaccgcaaggtggtcgacggt
gtggtcaccgacgagatccactacctgaccgccgacgaggaggaccgccacgtggtggcg
caggccaactcgccgatcgacgcgaacggccggttcgaggagtcgcgcgtcctggtccgc
cggaaggcgggtgaggtcgagtacgtgccgtcgtccgaggtggactacatggacgtgtcg
ccgcgccagatggtgtcggtggccaccgccatgatcccgttcctcgagcacgacgacgcc
aaccgtgccctgatgggcgccaacatgcagcgtcaggcggttccgctggtgcgcagcgag
gcgccgctggtgggcaccggcatggagttgcgcgccgcgatcgacgccggcgacgtcgtc
gtcgcggacaaggccggggtgatcgaggaggtctccgccgactacgtcaccgtgatggcc
gacgacggcacccggcacacctaccggatgcgcaagttcgagcggtccaaccacggcacg
tgcgccaaccagtcgccgatcgtggacgccggggaccgggtcgaggccggccaggtcatc
gccgacggtccctgcaccgagaacggtgagatggcgctgggcaagaacctgctggtggcg
atcatgccgtgggagggccacaactacgaggacgcgatcatcctgtccaaccgcctggtt
gaggaggacgtgctcacctcgatccacatcgaggagcacgagatcgacgctcgcgacacc
aagctgggcgccgaggagatcacccgggacatcccgaacgtctccgacgaggtgctggcc
gacctcgacgagcgcggcatcgtccgcatcggcgccgaggtccgcgacggcgacatcctg
gtcggcaaggtcaccccgaagggtgagaccgagctgaccccggaggagcggctgctgcgc
gcgatcttcggcgagaaggcgcgtgaggtccgcgacacctcgctgaaggtgccgcacggc
gagtccggcaaggtcatcggcatccgggtgttctcccgcgaggacgacgacgagctgccg
gccggtgtcaacgaactggtccgcgtctacgtggcccagaagcgcaagatctccgacggt
gacaagctcgccggccgccacggcaacaagggcgtgatcggcaagatcctgcccgtcgag
gacatgccgttcctgccggacggcaccccggtggacatcatcctgaacacccacggtgtg
ccgcgacggatgaacatcggccagatcctggagacccacctcgggtgggtggccaagtcc
ggctggaacatcgagggttcccccgagtgggccgccaacctgccgaaggaactgcagagc
gcggagccgaacgccatcgtgtcgacgccggtgttcgacggcgcccgggaggcggagctg
cagggcttgctgtcctgcacgctgcccaaccgggacaacgaggtgatggtggacggcgac
ggcaaggcggtgctcttcgacggccgcagcggtgaaccgttcccgtacccggtgacggtt
ggcttcatgtacatcatgaagctgcaccacctggtggacgacaagatccacgcccgctcc
accggcccgtactcgatgatcacccagcagccgctgggtggtaaggcgcagttcggtggc
cagcggttcggtgagatggagtgctgggccatgcaggcctacggcgcggcgtacacgctg
caggagctgttgaccatcaagtccgacgacacggtcggccgggtcaaggtgtacgaggcg
atcgtcaagggcgagaacatccccgagccgggcatccccgagtcgttcaaggtgctgctc
aaggagctgcagtcgctgtgcctgaacgtcgaggtgctctcgtcggacggcgcggcgatc
gaactgcgcgaaggcgaggacgaggacctggagcgggctgcggccaacctgggaatcaac
ttgtcgcgcaacgagtccgcctctgttgaggacctggcttaa
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