Mannheimia haemolytica D174: J451_07045
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Entry
J451_07045 CDS
T02748
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mhao
Mannheimia haemolytica D174
Pathway
mhao03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mhao00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
J451_07045 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhao03021
]
J451_07045 (rpoB)
03400 DNA repair and recombination proteins [BR:
mhao03400
]
J451_07045 (rpoB)
Enzymes [BR:
mhao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
J451_07045 (rpoB)
Transcription machinery [BR:
mhao03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
J451_07045 (rpoB)
DNA repair and recombination proteins [BR:
mhao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
J451_07045 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
SPG4
Motif
Other DBs
NCBI-ProteinID:
AGQ41236
LinkDB
All DBs
Position
complement(1365151..1369176)
Genome browser
AA seq
1341 aa
AA seq
DB search
MAYSYSEKKRIRKSFGKRPQVLNVPYLLTIQLDSFEKFIEKDPEGQQGLEAAFRSVFPIV
SNNGATELQYVSYELGEPVFDVRECQIRGTTYAAPLRVKLRLVSYDREAAAGTVKDIKEQ
NVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFARIDRRRKLPATIILRALGYTTEEILNLFFEKIKFEIADNKLLMT
LVPERLRGETASFDIAANGKVYVEMGRRITARHIRALEKDNVTQIEVPVEYIVGKVAAQD
YVDLSSGEVICPANMEISMEMLANLSQAGYNQIEVLFTNDLDHGPYISETLRVDPTYDRL
SALVEIYRMMRPGEPPTKEAAEALFDNMFFSAERYDLSAVGRMKFNRSLEIPEGVGSGIL
SNDDIIGVMKKLIEIRNGRGEVDDIDHLGNRRIRSVGEMAENQFRIGLVRVERAVRERLS
LGDLDGVTPQDLINAKPISAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRLCPIETPEGPNIGLINSLSVYARTNNYGFLETPFRKVVNGQVT
EEIEYLSAIEESNNIIAQANSNLDENFRFTDTYVTCRQQGESGLFKPEEVQYMDISTQQV
VSVAAALIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMEKPIALDSGVAIVAKR
GGTVQYVDASRIVVKVNEDETIPGEAGIDIYNLIKYTRSNQNTCINQVPCVNLGEPVARG
EILADGPSTDLGELALGQNIRVAFMPWNGYNFEDSMLVSERVVQEDRFTTIHIQELSCVA
RDTKLGAEEITADIPNVGESALSKLDESGIVYIGAEVKGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNGTSGTVIDVQVFTRDGVEKDKRAKEIEEMQLCEAKKDL
AEELEILEAGLFTRVRNLLIEGGVKESALDGVAREKWLEQTLEDEAKQNQLEQLAEQHEE
LRKEFERKLEIKRNKIIQGDDLAPGVLKVVKVYLAVKRQIQPGDKMAGRHGNKGVISKIN
PVEDMPYDENGQPVEIVLNPLGVPSRMNIGQILETHLGLAAHGIGDQIDKMIKQQQEVAK
LREYMQKAYDLGHGSQVVDLSTFSDEEVMRLAQNLRKGLPLATPVFDGAHESEIKGLLEL
GGLPTSGQITLYDGRTGEKFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGG
KAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGTHYMEPGIPE
SFNVITKEIRALAIDMELDEA
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atggcatattcatattccgagaaaaagcgtatccgtaagagctttggcaaacgcccacaa
gttctgaacgtaccttatctattaacaattcagcttgattcttttgaaaaatttatcgaa
aaagatcctgaagggcagcaaggtttagaagcggcattccgttctgttttcccgattgtg
agcaacaatggtgcaacagaattacaatacgtttcttacgaattaggcgagccggtgttt
gacgtgcgtgagtgccaaattcgtggtacaacctacgctgcaccattacgcgtgaaattg
cgtttagtctcttacgatcgtgaagccgcagccggtacggtaaaagacattaaagagcaa
aacgtgtatatgggcgaaatcccattaatgaccgataacggtactttcgtgattaacggc
accgagcgtgttatcgtttctcaattacaccgtagcccaggtgtgttcttcgattctgac
aaaggtaaaacccactcttcgggtaaagtgctttataacgcacgcattatcccttaccgt
ggttcttggttagatttcgagtttgatccgaaagataacttatttgcccgtatcgaccgc
cgtcgtaaattgccggcaaccattattctacgtgcattaggctacaccaccgaagaaatc
ttaaatttattcttcgagaaaattaaatttgaaattgccgataataaattattgatgacg
ttagtgcctgagcgtttaagaggcgagactgcatcatttgatattgcagcaaacggcaaa
gtatatgttgaaatgggtcgccgtattaccgctcgtcatatccgtgcgttagaaaaagac
aatgtgacccaaattgaagtgccggtggaatatattgtcggcaaagtagcggctcaagat
tacgttgatttatcttcaggtgaagtgatttgcccggcgaatatggaaatctcgatggag
atgttggcgaatttatcacaagccggttacaaccagatcgaagtattatttaccaacgat
ttagaccacggtccatatatttctgaaaccttacgtgttgatccaacttacgaccgttta
agtgcgttggttgaaatctatcgtatgatgcgtccgggcgaaccaccaacgaaagaagcg
gcagaagcattattcgataatatgttcttctcggcagagcgttatgatttatcggcagta
ggtcgtatgaaattcaatcgctcgttagaaattccggaaggcgtaggcagcggtatttta
agcaacgatgacatcatcggtgtgatgaaaaaattaatcgaaatccgtaacggtcgtggt
gaagtggatgatatcgaccacttaggtaaccgtcgtatccgcagcgttggtgaaatggca
gaaaaccaattccgcattggtttggtgcgtgtagaacgtgcggtgcgtgagcgtttatct
ttaggcgatttagatggtgtaacaccacaagatttaatcaacgctaaaccgatttcagca
gcagtgaaagagttctttggttcatcacaactttcgcaatttatggaccaaaacaacccg
ctttcagaggtaacacataaacgccgtatctcggcattaggcccgggtggtttaacccgt
gagcgtgccggctttgaagtgcgtgacgtacacccgactcactatggtcgtttatgtcca
atcgaaactcctgaaggcccgaatatcggtttgatcaactcactatcggtgtatgctcgt
actaataactacggtttcttagagactccattccgtaaagtggtgaatggtcaagtaacc
gaagagatcgagtatttatctgcgattgaagaaagcaacaatatcattgcacaggcgaac
tcaaacttagatgagaacttccgttttaccgatacttatgtaacttgccgtcagcaaggc
gaatcgggcttattcaaaccggaagaagttcaatatatggacatctcaacccaacaagtg
gtttctgtggctgcggcgttaattccgttccttgagcacgacgatgcgaaccgtgcgtta
atgggtgcgaacatgcaacgtcaggcagttccaaccttgcgtgcggacaaaccattagtc
ggtaccggtatggaaaaaccaattgctcttgactcaggtgtagcgattgtcgcaaaacgt
ggtggtacggtgcagtatgttgatgcgtcacgcattgtagtgaaagtaaatgaagatgaa
accattccgggcgaagcgggtatcgatatttataacttaatcaaatacacccgttcaaac
caaaacacctgtatcaaccaagtaccttgtgtgaacttgggtgagccggttgctcgtggt
gaaatcttagcggacggtccttcaacagacttaggtgaattggcattaggtcaaaatatc
cgtgtggcatttatgccttggaacggttataacttcgaagactcaatgttagtttctgag
cgtgtggtacaagaagatcgctttaccactatccacattcaagaattatcttgtgtggcg
cgtgataccaaattaggtgcagaagagatcaccgctgatattccaaacgtgggtgaatct
gcattaagcaaattagatgaatcaggtatcgtttacatcggtgcagaagtgaaaggtggc
gacatcttagtaggtaaagtaactcctaaaggtgaaacccaattaacaccggaagaaaaa
ctattgcgtgcgatcttcggtgaaaaagcctctgatgtgaaagattcatcattgcgtgtt
ccaaacggtacttcaggtacggttatcgatgttcaagtatttacccgtgatggcgtagag
aaagataaacgtgcgaaagaaatcgaagagatgcaactgtgtgaagcgaagaaagactta
gcggaagagttggaaatcttagaagccggtttatttactcgtgttcgcaacctattaatt
gaaggcggcgtaaaagaatctgcattagatggcgttgctcgtgaaaaatggttagaacaa
acccttgaagacgaagcgaagcaaaatcagttagaacagttagcggaacagcacgaagag
ttacgcaaagaatttgaacgtaaacttgagatcaaacgcaacaaaattatccaaggcgac
gatttagcaccgggtgtgttaaaagtagtgaaagtttaccttgcggtgaaacgccaaatc
cagccgggtgataagatggcgggtcgtcacggtaacaaaggggttatctcgaaaatcaac
cctgtggaagatatgccatacgatgaaaacggtcagccggttgaaatcgtattgaacccg
ctgggcgtaccgtctcgtatgaacatcggtcagatcttagaaacccacttaggcttagcg
gctcatggtatcggtgatcagattgataagatgatcaaacagcaacaagaagtggctaaa
ttacgtgaatatatgcaaaaagcctacgatttaggtcacggctcacaagtcgttgattta
agcactttctctgatgaagaagtgatgcgtttagcgcaaaacttacgcaaaggcttaccg
cttgctactccggtattcgatggtgcacacgaaagcgaaatcaaaggcttattagagtta
ggcggcttaccgacttcaggtcagatcacactttatgatggtcgtaccggtgagaaattt
gagcgtccggtaaccgttggttatatgtatatgctcaaattgaaccacttggttgatgat
aaaatgcacgctcgttcaaccggttcttatagccttgttactcaacaaccattgggtggt
aaagctcaattcggtggtcagcgtttcggtgagatggaggtttgggcattagaagcatac
ggtgcggcttatactcttcaagaaatgcttacggtgaaatcggacgatgtgaacggtcgt
acgaagatgtataaaaacattgtagatggtacacattatatggagccgggtatccctgaa
tcctttaacgtaattaccaaagagatccgtgcattagcaattgatatggagctggacgaa
gcgtaa
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integrated database retrieval system
