Miniphocaeibacter halophilus: JFY71_07565
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Entry
JFY71_07565 CDS
T08075
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mhap
Miniphocaeibacter halophilus
Pathway
mhap03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mhap00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JFY71_07565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhap03021
]
JFY71_07565
03400 DNA repair and recombination proteins [BR:
mhap03400
]
JFY71_07565
Enzymes [BR:
mhap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JFY71_07565
Transcription machinery [BR:
mhap03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JFY71_07565
DNA repair and recombination proteins [BR:
mhap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JFY71_07565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
DUF5887
Motif
Other DBs
NCBI-ProteinID:
QQK07181
LinkDB
All DBs
Position
1545706..1549362
Genome browser
AA seq
1218 aa
AA seq
DB search
MHKEQYGITERVSYSRIQKVLDLPNLIAVQKNSYDWFLKEGLREVFDDISPISDYAGSLV
LEFIDYYLEETPKYSEVEAKDRDANYSCPLKVKVRLINKETEEVKEQEVFMGDFPMMTNS
GTFIINGAERVIVSQLVRSPGVYYGEEIDKSGNKLYSSTVIPNRGAWLEYDTDANGVISV
RIDRTRKLPVTTLLRALIYPTDEEIIEALGDTKELRATLEKEVSNTREEALLEIYRKLKP
GDPAAIESAEPLINNLFFDSRRYDLAKVGRYKFNKKLSLVDRIVGTHAAYDVVNEETGEI
LVSEGEFINNEIAKSIEDAGIYFLDVIKDENKVRVISNRFVDLDAFDIDFDISDLKLSEK
VYYPKMKEILETYDNEKDIRNAIKENYNALSPIHITPQDILASISYEFNLFYGVGKVDDI
DHLGNRRVRAVGELLQNQFRIGLSRMERVVKERMSTQDPDLATPQALINIRPVVASIKEF
FGSSQLSQFMDQTNPLAELTHKRRMSALGPGGLSRDRAGAEVRDVHDTHYGRICPIETPE
GPNIGLITSMTTYASLNEYGFLQTPYRKVENGVVTDQIDLLTADLEDTFIIAQANEPLDE
NGAFVNERVLGRGYNGENDIYPREKVDYMDVSPQQIVSVGTAMIPFLENDDATRALMGSN
MQRQAVPLLKTDAPIIGTGIEHKAAKDSGVVVLSNCNGVVTKVASNEIHITRDEDKRVER
YKVLKFKRSNQGTAFNQRPIVKVGDRVSVGDIIADGPSTENGEIALGKNILIAFMTWEGY
NFEDAMLLNEKLVIDDVLTSLHIEEHESEARETKLGPEEITKDIPNVGEDMRKDLDDRGI
IRIGAEVTSGDILVGKVTPKGETELSAEERLLRAIFGEKAREVRDTSLRVPHGETGIVVD
VKVYTRANGDELSPGVNQVVRVYVATKRKIQVGDKMCGRHGNKGVVSRILPVEDMPYLDD
GTPIQIVLNPLGVPSRMNLGQVLEVHLGLAAKKLGWKVATPVFDGASDKDIIEALEQAGY
PGNGKVRVRDGRTGESFDNPVTVGYMYMLKLHHLVDEKIHARSTGPYSLVTQQPLGGKAQ
FGGQRFGEMEVWALEAYGASHTLQEILTVKSDDIVGRVKTYESIVKGENIPEPGVPESFK
VLIKELQSLSLDVKLLNANHEQIFFKENDDEVMDFHSVENEFTKKEEIVNDIESDEYKSD
TELGFSIIEKDESSLQQE
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgcataaagaacagtacggaattacagaaagagtaagttattctcgtattcagaaagtt
ctagatctccctaatttaatagcagtacaaaagaatagttatgattggtttttaaaagaa
ggacttagagaagtttttgacgatataagtcctatttctgactatgcaggttctttagta
ctagaatttattgactattatttagaggagactcctaagtattctgaggtagaagctaaa
gacagggatgcaaattattcttgtcccctaaaagttaaggtaaggcttattaataaggaa
acagaagaagtaaaagagcaagaagttttcatgggagattttcctatgatgaccaatagt
ggtacttttattataaacggtgctgaaagagttatagtaagccagttagttcgttctcca
ggtgtttattatggagaagaaatagataaatctggaaataaattatattcttccacagtt
atacctaatagaggtgcatggttagagtatgatacagatgcaaatggggttattagtgta
agaatagacaggactagaaaattacctgttactactttacttagagctttaatatatcct
acagacgaggaaataatagaagctttaggggatacgaaggaattaagagcgactcttgaa
aaagaggtctcaaatacaagagaagaagccttattagaaatatatagaaaattaaaacca
ggggatccagcagcaatagaatctgcagagcctcttattaacaacctattttttgatagt
agaagatatgatttagcaaaagtaggtagatataaatttaataaaaaattatctttagta
gatagaatagttggaacacacgctgcatatgatgttgttaatgaagaaaccggagaaata
ttggtttctgaaggcgaatttataaacaacgaaattgctaaaagcattgaagatgcaggt
atttactttttagatgtaataaaagatgaaaataaagttagagttattagtaatagattt
gtagatttagatgcatttgatattgattttgatatttctgatttaaaattatcagaaaaa
gtatattatcctaagatgaaagaaattttagaaacttatgataacgaaaaagatattaga
aatgcaattaaagaaaattacaatgccttaagtccaattcatattactccacaggatatt
cttgcaagtatttcctatgaattcaatcttttctacggtgtaggaaaagtagatgatatt
gatcatttaggtaatagaagagttagggcagtaggagaacttttacaaaatcaatttaga
ataggtctttctagaatggaaagagtagtaaaagaaagaatgtctacacaagatcctgat
ttagctacacctcaggccttaataaatataagaccggtagtagcatctataaaggaattc
tttggttccagtcaattgtctcaatttatggaccaaacaaatcctttagcagaacttacc
cataaaagaagaatgtctgcattaggaccaggtggacttagtagagatagagccggggcg
gaagtcagagacgtccacgatactcattatggaagaatttgtccaatagaaactccagaa
ggaccaaacattggtcttattacttccatgactacctatgctagtttaaatgagtatgga
tttttacaaactccttataggaaagttgaaaatggagttgttacggatcaaattgacctt
ttaactgcagatcttgaagatacttttataatagcgcaggcaaatgagccactagatgaa
aatggagcatttgttaatgaaagggtattaggtcgtggttacaatggagaaaatgatatt
tatcctagggaaaaagttgactatatggacgttagtccacaacagatagtttctgtaggt
acagctatgattccattcttggaaaatgatgatgctacacgtgcccttatgggttctaat
atgcagagacaagctgttccattattaaaaacagatgcaccgattataggaaccggtata
gaacataaagcggctaaagattcaggcgttgttgtattgagtaactgtaatggtgttgtt
acaaaagttgcaagtaatgaaattcatataactagagatgaagataaaagagttgaaaga
tataaggtcttaaagtttaaaagatccaaccaaggaactgcatttaatcaaaggccaata
gttaaagtaggcgatagagtatctgttggtgatattattgcagatggtccaagtactgaa
aatggtgaaatagctttaggaaaaaatattttaatagcatttatgacttgggaaggctat
aacttcgaagatgctatgttattaaatgaaaaattggttattgatgatgttttaacatca
cttcatattgaagaacatgaaagtgaagctagggaaactaaattaggtccagaagaaata
actaaggatataccaaatgttggggaagatatgagaaaagatcttgatgacagaggtatt
attagaataggggctgaagttactagtggtgatattttagttggaaaggttactcctaag
ggagaaactgaattatcagctgaagaaagactattaagagcaatatttggagaaaaagct
agagaagtaagggatacttcattaagagttccccatggagaaactggaatagtagtagat
gttaaagtatatacaagagctaatggagatgaattatcaccaggtgttaaccaagtagtt
agagtttatgttgctacaaaaagaaaaatacaagttggagataaaatgtgtggacgtcat
ggtaataaaggggtagtttcaagaatattgcctgtggaagatatgccatatttagatgat
ggaactccaattcaaattgtattaaacccattaggggtaccttcaagaatgaacttagga
caggtattggaagttcatttaggattagcagctaagaaacttggatggaaagttgcaaca
cctgtatttgatggtgcttcagataaagatattattgaagctttagaacaagcaggatat
ccaggaaatggaaaagtaagagttagagatggaagaacaggagaatcatttgataaccca
gtaactgtaggttacatgtatatgttaaaactacatcatttagtagatgaaaaaatacat
gctcgttctacaggtccatattctttagttacacaacaaccacttggaggtaaggctcaa
tttggtggacaaagatttggtgaaatggaagtttgggctttagaagcttatggagcatct
catactttacaagaaatcttaactgttaaatcagatgatatagttggtcgtgttaaaact
tacgaatcaatagtaaagggagaaaatattccagagcctggtgtaccagaatcatttaaa
gttttaattaaagaactacaatcattgtctttagatgtgaaattattaaatgctaatcat
gagcaaattttctttaaagaaaatgatgatgaagtaatggactttcacagtgtggaaaat
gaatttactaagaaagaagaaatagtaaatgatatagaatctgatgaatataaatcagat
accgagttaggtttttctattattgaaaaagatgaaagtagccttcaacaagaataa
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