KEGG   Methylocystis heyeri: H2LOC_004375
Entry
H2LOC_004375      CDS       T06290                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
mhey  Methylocystis heyeri
Pathway
mhey02024  Quorum sensing
mhey03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mhey00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    H2LOC_004375 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    H2LOC_004375 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mhey03019]
    H2LOC_004375 (hfq)
   03036 Chromosome and associated proteins [BR:mhey03036]
    H2LOC_004375 (hfq)
Messenger RNA biogenesis [BR:mhey03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     H2LOC_004375 (hfq)
Chromosome and associated proteins [BR:mhey03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    H2LOC_004375 (hfq)
SSDB
Motif
Pfam: Hfq Hfq_1
Other DBs
NCBI-ProteinID: QGM44986
UniProt: A0A6B8KA68
LinkDB
Position
977965..978225
AA seq 86 aa
MSERAQNLQDTFLNFVRKNKVPLTIFLVNGVKLQGIVTWFDNFCLLLRRDGHSQLVYKHA
ISTIMPAHPIHMFEPGEDGEGAAEKR
NT seq 261 nt   +upstreamnt  +downstreamnt
atgtcggagcgcgcgcagaacctgcaagacacttttctgaattttgttaggaaaaacaaa
gttcccctcacgattttcctcgtcaacggggtcaagcttcaaggaattgtcacctggttc
gacaacttctgcctcctgcttcggcgggacggtcactcgcagctcgtctacaaacacgcc
atctccaccataatgccggcgcacccgatccatatgttcgaacccggcgaagacggcgaa
ggcgcggcggagaagcgttga

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