Mesomycoplasma hyorhinis MCLD: SRH_01850
Help
Entry
SRH_01850 CDS
T01945
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mhm
Mesomycoplasma hyorhinis MCLD
Pathway
mhm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mhm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SRH_01850 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhm03021
]
SRH_01850 (rpoB)
03400 DNA repair and recombination proteins [BR:
mhm03400
]
SRH_01850 (rpoB)
Enzymes [BR:
mhm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SRH_01850 (rpoB)
Transcription machinery [BR:
mhm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SRH_01850 (rpoB)
DNA repair and recombination proteins [BR:
mhm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SRH_01850 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AEC45929
UniProt:
A0ABM5M613
LinkDB
All DBs
Position
complement(402297..406007)
Genome browser
AA seq
1236 aa
AA seq
DB search
MEFKLSKYGPTTLRRDYSKTKFSLPTPDFLDSQKQSFKWFLKEGIEETFNKIYPIISTNG
KIEIRFKKGSVRVEDPDQDYTNIKELKRKGKSFVCKVFATLEKLQVESGELEKQEILFGE
IPYMTEGGTFIINGFEKVIVSQLIRSPGVCFRENVRNRQVDDLFNKVEIIPQLGSWLEIF
HRVTRNATDTVKLRIDKHKNIPLITFLKAIGFVDKDIIKKYFGDSPELRESLKKDKFLRK
DKVQEQLDSLESIYRTIRKDDRITTEGLKNFIPALLFNERRYNLSKTGRYMLNRKLNLLD
RIIQTYLAEDIFDSKGKLLYPLGTFITPKIANDIQSKFENSILPLSEIEGIDENVYGRQL
EITKNENLNTRTKIITLRVWPNKHAMEQDANKEQQEKSVLVIGNDPTSIEMHLLISDIVA
IVSYYFNLLANLGKNDDPDSLVNKRVVNVGELLQNQFLIALSKLEKNTKERISSRGDSEK
INIKNITNNKPIYNQFKNFFNSSKLSQFMDQINPLGEMANKRRVTSLGPGGLNRETAQFE
VRDVHVTHYGRICPVETPEGQNIGLILNFAVYAKTNPYGFIQTPYFPVENGVVNYDPQNI
VWLTAAEEFGYTFAQSSLLVDENNKIIEPEIIVRKNYTYLTVKPEQVDFIAVSSKQMTSL
SASAVPFLENNDANRALMGSNMQRQAVPLITTEAPYVATGIEADVAKFSSTNIRASEDGE
VVFVDSKSIQIKNEQGNIKTYHLRYFERSNQETLILQRPIVEVGQFVKQGDLICDGPSTD
QGELALGKNVLVAFSTWYGYNYEDAIIISEKLVKDDVFTSIHIQEQTIQFRSSKAGNDDL
TREIPNASQRSKRHLDENGIVRIGSEVSAGDILVGRTSPKGEDNPTPEEKLMNAIWGKKA
SSQKDTSLKVKHGDGGTVIDVQILSRTREDNLEDGVEKIIKVFIAQKRKIKVGDKMAGRH
GNKGVISLVLPVEDMPFLEDGTPIDILLNPQGIPSRMNIGQILEMHLGMVAKKLDIKFVC
PVFDGVKLDKMKELFNQAGIPESGKFTLYDGITGQPFDNDVSIGYMYMLKLQHMVDDKMH
ARSVGPYSLTTQQPLGGKSQNGGQRFGEMETWALESFGASSVLLELLTYKSDNIQGRNAL
YNNLVSGGKIPKPGTPESFNVLAYELRGLGIKLEVHKKENQEEDPEANAENASNPEEMLL
EDAFDQEYFESQMSKVEDYQEDYADDDFEDAFDHFK
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atggaatttaaattatcaaaatatggacctacaacactacgtagagattattctaaaacc
aaatttagtctacctactccagattttttagattcacaaaaacaatcttttaaatgattt
ttaaaagaaggaattgaagaaacctttaataaaatatatcctattatttctactaatgga
aaaatagaaattagatttaaaaaaggttctgtaagagttgaagatccagatcaagactac
actaatattaaagaactaaaaagaaaaggaaagtcttttgtttgcaaggtttttgcaaca
ctagaaaaacttcaagttgaatccggtgaactagaaaaacaagaaattttatttggtgaa
ataccttatatgactgaaggtggaacttttatcattaatggatttgaaaaagttatagtt
tcacaattaattagatcacctggagtatgctttagagaaaatgttagaaacagacaagtt
gatgacttatttaataaagttgaaattattcctcaactaggttcatgacttgaaattttc
catagagttacaagaaatgcaacagatacagttaaattaagaatagataaacataaaaac
atacctttaattacttttttaaaagcaattggttttgttgataaagatataattaaaaaa
tattttggtgattctccagaacttagagaatcattgaaaaaagacaaatttttaagaaaa
gataaagtacaagaacaattagatagcttagaatctatttacagaacaattagaaaagat
gacagaataacaacagaaggattgaaaaactttattcctgctttattattcaatgaacgt
cgttataacttatctaaaactggtagatatatgttaaatagaaaattgaatttattagat
agaataattcaaacctatttagctgaagatatttttgattctaaaggaaaattattgtat
cctttaggaacttttattactcctaaaattgcaaatgatattcaatctaaatttgaaaat
tcaattctgcctttatcagaaatcgaaggtatagatgaaaatgtttatggtcgtcaatta
gaaattactaaaaatgaaaatttaaacaccagaacaaaaattattaccttaagagtttga
ccaaacaaacatgctatggaacaagatgctaacaaggaacaacaagaaaaatcagttcta
gttattggaaatgatccaacatcaattgaaatgcatttattaatttcagacatagtagct
attgtttcatattacttcaatttacttgctaatttaggtaaaaatgacgatccagattca
ttagtaaacaaacgtgttgttaatgtaggtgagttattacaaaatcaatttttaattgct
ttatccaagctagaaaaaaacacaaaagaaagaatttcttctagaggagatagcgaaaaa
attaacattaaaaacatcacaaataataaacctatttataatcaattcaaaaacttcttt
aattcttcaaaactttcacaatttatggatcaaataaatcctttaggtgaaatggcaaac
aaaagaagagtaacctctttaggacctggaggtcttaatagagaaactgcacaattcgaa
gttcgtgacgtccatgttactcactatggaagaatttgtccagttgaaacacctgaggga
caaaatattggacttattttaaactttgcagtttatgcaaaaactaatccatatggattt
attcaaactccttatttcccagtagaaaatggtgttgtaaattacgatccacaaaatatt
gtttgattaacagcagcagaagaatttggatatacttttgctcaatcttctttattagtg
gatgaaaataacaaaattattgaaccagaaattattgttcgtaaaaactatacttattta
acagttaaaccagaacaagttgattttatagcagttagttccaaacaaatgacttcactt
tcagctagtgctgttccatttttagaaaacaacgatgctaaccgtgcgctaatgggttca
aatatgcaacgtcaagctgttccattaattactacagaagctccttatgttgctacagga
attgaagcagatgtagctaaattctcatcaactaacatcagagctagcgaagatggagaa
gtagtttttgttgattctaaatcaattcaaatcaaaaacgaacaaggaaatattaaaact
tatcacctacgttattttgaaagatcaaaccaagaaactttgattttacaacgtccaata
gttgaagttggtcaatttgttaagcaaggtgatttaatttgtgatggtccttctacagat
caaggtgaattggctttgggtaaaaacgttttagtagctttttccacttgatatggatac
aattacgaagatgcgattattattagtgaaaaactagttaaagatgatgtttttacttca
attcatattcaagaacaaactattcaatttagatcttcaaaagcaggtaatgatgatctt
actagagaaattccaaatgcttcacaaagaagtaaaagacacttagatgaaaacggaatt
gtccgtattggatcagaagttagtgcaggtgatattttagtaggtagaacttcaccaaaa
ggagaagataatccaacacctgaagaaaaattaatgaacgcaatttgaggtaaaaaagcc
tcatctcagaaggatacttcattaaaagttaaacacggtgatggtggtacagttattgat
gtgcaaattctttcaagaactcgtgaagataatttagaagacggtgttgaaaaaatcatc
aaagtctttatcgctcaaaaaagaaaaattaaagttggggataaaatggccggaagacac
ggaaacaaaggagttatttccttagttttaccagttgaagatatgccatttttagaagat
ggaacaccaattgatattcttttaaatccacaaggtattccttcacgtatgaacatcgga
caaattctagaaatgcaccttggtatggttgctaaaaaattagatattaaatttgtttgc
ccagtgtttgacggagttaaattagataaaatgaaagaattgtttaatcaagcaggtatt
ccagaatcaggtaaatttactttatacgatggaatcacaggtcaaccttttgacaatgat
gtttcaatcggctatatgtatatgttaaaactacaacacatggtagatgataaaatgcat
gcacgttctgttggtccatattcactaacaactcaacaaccacttggaggaaaaagtcaa
aacggtggacaaagatttggagaaatggaaacctgagctcttgaatcctttggtgcttca
tctgttttacttgaacttttaacttacaaatcagataatattcaaggtagaaatgcttta
tacaacaacctagtttcaggaggaaaaataccaaaaccaggaactccagaatcctttaac
gttttagcatatgaactaaggggattaggtattaaactagaagttcacaaaaaagaaaat
caagaagaagatccagaagcaaacgctgaaaatgcttcaaatcctgaagaaatgttgctt
gaagatgcttttgatcaagaatattttgaaagccaaatgtctaaagtagaagattatcag
gaagattacgctgatgatgattttgaagatgcttttgatcattttaaataa
DBGET
integrated database retrieval system
