Methanosarcina horonobensis: MSHOH_2456
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Entry
MSHOH_2456 CDS
T03933
Name
(GenBank) Eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
mhor
Methanosarcina horonobensis
Pathway
mhor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mhor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MSHOH_2456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhor03019
]
MSHOH_2456
03012 Translation factors [BR:
mhor03012
]
MSHOH_2456
Messenger RNA biogenesis [BR:
mhor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
MSHOH_2456
Translation factors [BR:
mhor03012
]
Eukaryotic type
Release factors
MSHOH_2456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
SLX1_C
HMBD
PWP3A-B_C
Vps36-NZF-N
Motif
Other DBs
NCBI-ProteinID:
AKB78939
UniProt:
A0A0E3SAY6
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Position
2990456..2991703
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AA seq
415 aa
AA seq
DB search
MAEYCTYEKYVFKKKLETLRNKSGRSMELISLYIPSDKQISDVTNHLREEHEQASNIESK
LTRNNVQGALDSLLAKLRYLNRIPENGIVYFAGIVDTGANRTSMENEVLIPPEPVVHYIY
HSDSIFYLEPLEEMLRECSTYGLILLDQREATIGMLVGKQTEVIKHLHSTVPGKQRKGGQ
SAHRFEQLRRIAIHDFYKRIGDAASEAFLEVEPAELKGILIGGHSPAKEEFNEGGFLHYE
LQKKVLGLFDTGYTDESGFSELINAAEHTLQGIDLIKQKKDMEMFFKEMGTESGKVSYGE
DNVRENLEIKAVDVLLLSEDLRSERVTLKCSVCGYENKWTRKWKPNETVPVAGNCPECGY
ALEFTDVIDIVGEFSELADKGSARIAFISTDFDEGSQLMIAFGGIAAILRYNTGV
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggccgaatactgtacatatgaaaaatatgtatttaaaaagaagcttgaaactctaaga
aataaaagtgggaggagcatggaattaatttccctttatattccttccgataaacagatt
tcagatgttacaaatcatctaagagaagaacacgagcaggcttcgaacattgagtctaaa
cttaccagaaataacgtacagggagcacttgactctttgctggcaaagttaagatatctt
aacagaataccggaaaatggaatagtttattttgcaggaattgtcgataccggagctaac
aggacaagcatggaaaacgaagttctcattcctccggaacctgttgtacattacatatac
cactctgattccattttttatcttgagcctcttgaggaaatgcttagagaatgcagtact
tatgggcttatacttcttgatcaaagagaagctactatcggaatgcttgtgggtaagcaa
actgaagttattaaacatctccattctactgtccctggcaaacaaagaaaaggaggtcag
agtgcacatcgttttgaacagctcagacgcattgccattcatgatttctacaaaagaata
ggggatgctgcaagtgaggcattccttgaagtagagccggctgaacttaaaggcattctg
ataggagggcattctccagctaaagaagagttcaatgaaggtggatttctacattacgag
cttcagaaaaaggtccttggattgtttgatacagggtatacggatgaatcaggtttttct
gagttaataaatgcagcagaacatacgctccagggtattgacttaattaaacaaaaaaaa
gatatggaaatgttttttaaagaaatgggcactgaatccggtaaagtgtcctatggagaa
gacaatgtacgggagaatcttgaaataaaggcagttgatgtgcttctactttctgaagac
ctgcgatctgaaagagtaactctcaaatgcagtgtttgtggatatgaaaataaatggaca
cgaaaatggaaacccaatgaaactgttcctgtggcaggaaattgtcctgaatgtggttat
gcacttgaattcacggatgttattgatatcgttggtgaattctcagaacttgctgataaa
ggcagtgcaaggattgcttttatatcaacagatttcgatgaaggctctcaacttatgata
gcctttggcggaattgctgcaatccttagatataacacaggggtgtag
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