Micromonospora sp. B006: MicB006_3362
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Entry
MicB006_3362 CDS
T05583
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
micb
Micromonospora sp. B006
Pathway
micb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
micb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MicB006_3362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
micb03400
]
MicB006_3362
DNA repair and recombination proteins [BR:
micb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MicB006_3362
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MicB006_3362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_22
AAA_16
AAA_30
UB2H
DUF87
AAA_5
Motif
Other DBs
NCBI-ProteinID:
AXO35642
UniProt:
A0A385AU90
LinkDB
All DBs
Position
complement(3773241..3775391)
Genome browser
AA seq
716 aa
AA seq
DB search
MVVAEVSDPGRTVGGMALDIPRLDGRFQVVSEFQPAGDQPAAIDELERRVRRGDRNTVLL
GATGTGKSATTAWLVERLQRPTLVLAPNKTLAAQLAKEFGELLPRNAVEYFVSYYDYYQP
EAYIPQTDTYIEKDSSVNEEVERLRHSATMSLLTRRDVIVVATVSAIYGLGTPEEYLERA
VRVKVGQELDRDQLLRRLVDIQYTRNDMAFQRGTFRVRGDTLEIIPAYEELAVRIELFGD
EIEKLYYLNPLTGDVVREVDSLMIFPATHYAAGPERMERAIRDIEAELGERLAELERQGK
LLEAQRLRMRTTYDIEMMRQVGFCSGIENYSMHIDGRLPGSPPHCLLDYFPDDFLTVIDE
SHVTIPQIGGMYEGDASRKRMLVDHGFRLPSAADNRPLRFDEFLERVGQTVYLSATPGPW
ELEQAQGEFVEQVIRPTGLIDPEVVVKPTKGQIDDLMHEIKLRTERDERVLVTTLTKKMA
EDLSDYLLENGIRVRYLHSEVDTLRRVELLRELRKGDYDVLVGINLLREGLDLPEVSLVA
ILDADKEGFLRSGRSLIQTIGRAARNVSGQVHMYADKITPSMANAIDETNRRRAKQIAHN
EANGIKPEPLRKKIHDILDDIYREAEDTENSNVGGAVRQLSRGKAPVKETRSRRGAAGTP
SREGMARADLANLIQELNDQMLAAARELQFELAARIRDEVADLKKELRGMDAAGVR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgtggccgaagtgtcggaccccgggcgtaccgttggtggcatggcgctcgacatt
ccccggctcgacggccgtttccaggtcgtcagtgagttccagccggccggtgaccagccg
gcggcgatcgacgagcttgagcggcgcgtgcggcgcggcgaccgcaacacggtgctgctc
ggcgcgaccggcaccggcaagagcgccaccacggcgtggctggtcgagcggctccagcgg
ccgaccctggtgctcgcccccaacaagaccctcgccgcccagctcgcgaaggagttcggc
gagctgctgccgcgcaacgcggtggagtacttcgtctcctactacgactactaccagccc
gaggcgtacatcccgcagaccgacacctacatcgagaaggactcctcggtcaacgaggag
gtcgagcggctgcggcactcggccaccatgtcgctgctcacccggcgggacgtcatcgtg
gtcgccaccgtctcggcgatctacggcctgggcacgccggaggaatacctcgagcgcgcc
gtccgggtcaaggtggggcaggagctcgaccgcgaccagctgctgcggcggctggtcgac
atccagtacacccgcaacgacatggccttccagcgcggcaccttccgggtccgcggcgac
acgctggaaatcatcccggcgtacgaggagctggcggtccggatcgagctgttcggtgac
gagatcgagaagctctactacctgaacccgctgaccggcgacgtggtccgcgaggtcgac
agcttgatgatcttcccggccacacactacgccgccggtccggagcggatggaacgggcg
atccgcgacatcgaggccgagctgggcgagcggctggctgagctggagcggcagggcaag
ctgctggaggcccagcggctgcgcatgcgcaccacctacgacatcgagatgatgcgccag
gtgggcttctgctccggcatcgagaactactccatgcacatcgacggccggctgcccggc
agcccgccgcactgcctgctcgactacttcccggacgacttcctcaccgtgatcgacgag
tcgcacgtgacgatcccgcagatcggcggcatgtacgagggtgacgcctcccgcaagcgg
atgctcgtcgaccacggcttccgcctgccgagcgccgcggacaaccggccgctgcgcttc
gacgagttcctggagcgggtgggccagacggtctacctctccgccacccccggcccgtgg
gagctggagcaggcccagggcgagttcgtcgagcaggtgatccgccccaccggcctgatc
gaccccgaggtcgtggtcaagccgaccaagggccagatcgacgacctcatgcacgagatc
aagctgcgcaccgagcgggacgagcgcgtgctcgtcaccacgctcaccaagaagatggcc
gaggacctctccgactacctgctggagaacggcatccgggtgcgctacctgcactccgag
gtcgacacgctgcgccgggtcgagctgctgcgcgagctgcgcaagggcgactacgacgtg
ctcgtcggcatcaacctgctccgggagggtctcgacctgcccgaggtctccctggtggcg
atcctcgacgccgacaaggaggggttcctgcgcagcggccggtcgctgatccagaccatc
ggccgggcggcccgtaacgtctccggccaggtccacatgtacgccgacaagatcacgccg
tcgatggcgaacgcgatcgacgagaccaaccggcgccgggccaagcagatcgcgcacaac
gaggcgaacggcatcaagccggagccgctgcgcaagaagatccacgacatcctcgacgac
atctaccgcgaggcggaggacaccgagaacagcaacgtcggcggggccgtgcggcagctc
tcccggggcaaggcgccggtgaaggagacgcgcagccgccgcggcgccgcggggaccccg
tcgcgcgaggggatggcccgggccgacctggccaacctcatccaggagctcaacgaccag
atgctcgccgccgcgcgggagctgcagttcgagctggccgcccggatccgggacgaggtc
gccgacctcaagaaggagttgcgcgggatggacgccgcaggggtccggtga
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