Microbulbifer aggregans: AUP74_02312
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Entry
AUP74_02312 CDS
T04560
Name
(GenBank) ATP-dependent DNA helicase DinG
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
micc
Microbulbifer aggregans
Pathway
micc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
micc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AUP74_02312
09124 Replication and repair
03420 Nucleotide excision repair
AUP74_02312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
micc03021
]
AUP74_02312
03400 DNA repair and recombination proteins [BR:
micc03400
]
AUP74_02312
Enzymes [BR:
micc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
AUP74_02312
Transcription machinery [BR:
micc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AUP74_02312
DNA repair and recombination proteins [BR:
micc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AUP74_02312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
Motif
Other DBs
NCBI-ProteinID:
AOS97720
UniProt:
A0A1C9W9A8
LinkDB
All DBs
Position
2638342..2640852
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AA seq
836 aa
AA seq
DB search
MAAAVSEVDPVENTVSDDKAKDLPVLELSVGELVAFACRRGDLVGERTGGPSAQEGIRVH
QKLQKKRPPGSEAEYLLQVQWHCDGQAVVLRGRVDILHPQTDLHRPVQLDEIKTTYCPPE
HLPESARQLHWAQLKIYGFCYLLQQRREAEKAATGDRIALQMLWYNLKEKKGYPELREFN
WGELERFTSDALREYLLWHRRWQQHRQRVRESARVLAFPFTDYRAGQRPLAVAAYRCIRD
GGELVVEAPTGIGKTVSTLFPAIKSMGEEHVDQLVYLTAKNSGREVVRDTIARLQENGLT
LSLLQIQAREKTCACSLGLCSRDADGICPRTRGFFDRLPEARHQLLGEPLLTPEVLAEVA
DRLQLCPFELSLQMLPWADLVVCDFNYVFDPLVRLNVLQDRAQRRALLVDEAHNLGDRAR
GMFTAALNRSESRRAASACKGTHPTLRRSIQSLVLALDKWVAERREEGSRLAVTGDDKTE
LWVTSLAESDSRPLAVSRAADKVATVVSQLWEQGQSAPDDIADWLKALYRFLCIEQLAAE
QHRCLTRVRDRDAPWQEQQLKLLCLDAADYLQQVYRQFHAIIAFSATLRPPAYVTRELGV
QSASSYLQLPSPFDPQQLGVFLCPYVDTRYRARDRATDALVDMVARVYGSRPGNYLVFFP
SYRFMKLVADHFAGRFPQVDLVLQQSGASESERAAFLEHFTEGRQSLGFAIMGGVFGEGV
DYVGEQLVGTILVGVGLPQVNEEQELLRAAYDSGSEALGGTGFDFAYRYPGMTRVLQTAG
RVIRTESDRGVVILADYRFSDPFYRALYPEHWQVKVCSDGEALSNGLSRFWEPLVS
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagccgtgagtgaggtagatccggtcgagaacaccgtaagtgacgataaggca
aaggacctcccggtgttggaactctctgtgggtgaactggtggcttttgcctgtcgccgt
ggcgacctggttggtgagcgaactggcggcccctcggcccaggagggtatccgcgtccat
cagaaactgcagaaaaagcgcccaccgggcagcgaagccgagtacctcctgcaggtgcag
tggcattgtgatgggcaggccgtcgtgctgcgcggtcgcgtggatatcctgcacccgcaa
accgacctgcaccggcccgtgcagctggatgaaatcaagaccacctattgcccgccggaa
cacctgccggagtcggcccgccagctgcactgggcacagctgaaaatttacggcttctgc
tatctcctgcagcagcgccgtgaagcagagaaagccgccactggcgaccgcatcgccctg
cagatgctctggtacaacctgaaagagaagaagggttatccggagttgcgggagttcaac
tggggtgagctggagcgcttcaccagcgacgccctgcgggagtacctcctgtggcaccgc
cgctggcagcagcaccggcagcgcgtgcgtgagtctgcccgggtgctggcatttcccttc
accgactaccgtgccgggcagaggccactggcggtggcggcctatcgttgtatccgtgat
ggcggtgagctggtggtggaggcgcccaccggtattggcaagacggtcagcaccctgttc
ccggcgatcaaatccatgggcgaggagcatgtggatcagctggtctacctgaccgccaag
aactccggccgggaggtcgtccgggatacgatagcgcgactgcaggaaaacggattgacc
ctgtccctgctgcaaattcaggccagggaaaaaacctgtgcctgctcgctggggctgtgc
agtcgcgatgcggatggtatctgtccccgtacccgtggttttttcgaccgcctgcccgag
gcgcggcatcagttactgggggaaccactgctgacccccgaggtgctggcagaagtcgcc
gaccgattgcagttgtgcccgttcgagctgtccctgcagatgctcccctgggccgacctg
gtggtgtgtgatttcaattatgtctttgatccgctggtgcggttgaatgtactgcaggac
cgggcccagcgccgcgctctattggtcgatgaggcgcacaacctgggtgaccgggcgcgc
ggcatgttcacggccgcgctcaaccgcagtgagagccgtcgggcagcgtcggcctgtaaa
ggcacccatccgacactgcgccgcagtatccagtcgctggtgctggctctggacaagtgg
gttgccgagcggcgggaagagggcagtcgtttagcagtaacgggcgacgacaagactgaa
ctgtgggtgacctcactggcggagtcggattcgcgccccctagccgtcagccgagccgcc
gacaaggtggcaaccgtggtgagccagttgtgggagcagggccagtcagcacccgatgat
atcgctgactggctgaaagccctttaccgcttcctgtgtatcgagcagctggctgcagaa
caacatcgttgcctgacgcgagtgcgagaccgcgatgcgccctggcaagagcagcagctg
aagcttctctgcctggatgcagcagactacctgcagcaggtgtatcgccagttccacgcc
atcattgccttttccgccaccttgcggcccccggcctacgtcacccgcgaactgggtgtt
cagagtgcgtcatcctacctgcaattgccatcgccctttgacccacagcaactgggtgtc
tttctctgcccgtatgtggacacccgctaccgggcgcgggatcgtgccacggatgcgctg
gtcgacatggtggcgcgggtctatggcagccggccgggtaactacctggtgttctttccc
tcctaccggtttatgaagctggtggcggaccactttgccggacgattcccccaggtggat
ctggtgctgcagcaatccggcgccagcgagagtgaacgcgcggccttcctcgagcacttt
accgagggccggcagagcctcggcttcgccattatgggtggtgtctttggtgaaggcgtc
gactacgtgggcgagcagctggtgggaaccatcctggtgggagtggggctgccacaggtc
aacgaggagcaggaactgttgcgtgcggcctacgacagcgggagtgaagccctgggtggc
acaggtttcgactttgcctaccgttacccgggtatgacgcgggtgctgcagactgccggg
cgggtgatccgcactgaatccgaccgcggcgtagtgattctggccgattaccgtttctcc
gatcccttttaccgcgccctgtacccggaacactggcaagtgaaggtatgcagtgatggc
gaggcgctctcgaatgggctcagccgcttctgggagcccctggtgtcgtaa
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