Microcystis ichthyoblabe: ACQY1Y_16145
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Entry
ACQY1Y_16145 CDS
T11428
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
micd Microcystis ichthyoblabe
Pathway
micd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
micd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACQY1Y_16145 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
micd03021
]
ACQY1Y_16145 (rpoB)
03400 DNA repair and recombination proteins [BR:
micd03400
]
ACQY1Y_16145 (rpoB)
Enzymes [BR:
micd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACQY1Y_16145 (rpoB)
Transcription machinery [BR:
micd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACQY1Y_16145 (rpoB)
DNA repair and recombination proteins [BR:
micd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACQY1Y_16145 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XTX18919
LinkDB
All DBs
Position
3329816..3333127
Genome browser
AA seq
1103 aa
AA seq
DB search
MNNLTFNLLPDLIEIQHSSFRWFLEEGLIEELNSFSPISDYTGKLELHFLGQDYRLKEPK
YNVDEAKRRDSTYSVQMYVPTRLINKETGENIEQEVFIGDLPLMTERGTFIINGAERVIV
NQIVRSPGVYYKAEIDKNGRRTYSASLIPNRGAWLKFETDKNGLVWVRIDKTRKLSAQVL
LKAIGLSDNEIFDSLRHPEFYQKTLDKEGNPTEEEALLDLYRKLRPGEPPTVTGGQQLLE
SRFFDNKRYDLGRVGRYKLNKKLRLNVPDNQRVLTTTDILSAIDYLINLEFDIGNTDDID
HLGNRRVRSVGELLQNQVRVGLNRLERIIRERMTVSESQNLTPASLVNPKPLVAAIKEFF
GSSQLSQFMDQTNPLAELTHKRRISALGPGGLTRERAGFAVRDIHPSHHGRICPVETPEG
PNAGLIGSLATYARVNDYGFIETPCYAVENGRVRYDLPVKYLTADEEDDLRVAPGDVATD
ENGYILGETIPVRYRQEFSTTSPEQVDYVCVSPVQIVSVATSLIPFLEHDDANRALMGSN
MQRQAVPLLRPERPLVGTGLEAQAARDSGMVIVSRTNGVVSYVDANRIRIKVADEDKEIF
GKSEIEYEIQKYQRSNQDTCLNQRPLVYQGEQVVPGQILADGSATEGGEIALGQNILVAY
MPWEGYNYEDAILISERLVAQDVYTSIHIEKYEIEARQTKLGPEEITREIPNVGEDALRN
LDERGIIRIGAWVEASDILVGKVTPKGESDQPPEEKLLRAIFGEKARDVRDNSLRVPNGE
KGRVVDVRVFTREQGDELPPGANMVVRVYVAQKRKIQVGDKMAGRHGNKGIISRILPLED
MPYLPDGRPVDIVLNPLGVPSRMNVGQVFECLLGWAGENLGVRFKITPFDEMYGEEASRL
TVHGLLENASKKPNRDWVFKEEHAGKVTVYDGRTGEPFDRPVTVGMAYMLKLVHLVDDKI
HARSTGPYSLVTQQPLGGKAQQGGQRFGEMEVWALEAYGAAYTLQELLTVKSDDMQGRNE
ALNAIVKGKPIPRPGTPESFKVLMRELQSLGLDIAVHKVENAPDGTSRDVEVDLMVDVGR
RAPSRPTYESLTTEDLEEEESEV
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatcttacctttaacctcttacccgacctcatcgaaatccaacactccagtttt
cggtggtttttggaagaaggactaatcgaggaactgaacagcttttcccccatcagcgac
tatacaggtaaattagaactacatttcctcggccaggactacagactcaaagaaccgaaa
tacaacgtcgatgaagccaaacgacgtgatagcacctattccgttcagatgtacgttcct
acccgtctaatcaacaaagaaacgggagaaaacatcgaacaggaagtgtttatcggcgat
ttacccctgatgaccgaacggggaacctttatcattaacggggccgaacgagtcatcgtc
aatcagatcgtccgttcccccggtgtttactacaaagccgaaatcgacaaaaacggtcgc
cgtacctactccgcttccctgattcccaaccgaggagcttggttaaaatttgaaaccgac
aaaaacggcttagtctgggtcagaatcgacaaaacccgcaaattatccgcccaagttctc
ctgaaagcgatcggattgagcgataacgaaatctttgactccctacgccatcccgaattt
taccaaaaaaccctcgacaaagaaggcaatcccaccgaagaagaggcactcctcgacctg
taccgcaaactacgccccggggaacctcccaccgtcaccggcggacaacaactgctcgaa
tcgcgcttttttgacaataaacgctacgatctcggtcgcgttggtcgttataaactcaac
aaaaaactacgcctcaacgtccccgataaccagcgcgttctcaccaccaccgacatctta
tcggcgatcgactacctaattaacctcgaatttgacatcggcaacaccgacgacatcgac
cacctcggcaaccgtcgcgtccgttccgtgggtgaactgctccaaaaccaagtgcgagta
ggtttaaaccgcttagaaagaatcattcgggaacggatgaccgtcagcgaatcccaaaac
ctcacccccgcttccctagtcaacccgaaacccctagtagcggcgattaaagaattcttt
ggttcctcgcaactctcccagttcatggatcaaaccaaccccctagcggaattgacccat
aaacgccgcatttccgcccttggacctggcggtctgacccgggaacgggccggttttgcc
gtgcgcgacatccacccctcccaccacggtcgcatttgtccggtggaaaccccagaaggt
cccaacgccggtttaatcggttccctggccacctacgctcgcgtcaacgactacggtttt
attgaaaccccctgttatgcggtggaaaatggccgagtacgctatgatctccccgttaaa
tacctcaccgccgacgaagaagacgatctcagagtcgcaccgggagacgtggccaccgat
gaaaatggttatatcctcggcgaaactatcccagtgcgctatcggcaggaattctccacc
acctcccccgaacaagtggactacgtttgtgtttcccccgtgcaaattgtctcggtggcc
acttccctgattcccttcctcgaacacgacgacgctaaccgcgccctcatgggttctaat
atgcaacgacaagcggttcccctgctgcgtcccgaacgtcccctggtgggtaccggattg
gaagcacaggccgctcgcgactccggcatggtcatcgtttcgcgtactaatggggtcgtt
tcctacgtcgatgctaaccggattcgcatcaaagtggcggatgaagacaaagagattttt
ggcaagagcgagatcgagtacgaaattcagaaatatcaacgctctaaccaagatacctgc
ctaaatcagcgtcctttagtctatcaaggcgaacaagttgtccccggacagatcctcgcc
gatggttccgccaccgaaggaggagaaatcgccctcggacagaatatcctcgtcgcctat
atgccctgggaaggctataactacgaagacgcgattttaatcagtgaacgactggtggca
caagatgtctataccagtatccacattgaaaaatacgaaatcgaagcccgtcaaactaaa
cttgggccagaggaaatcaccagggaaattcccaacgtcggtgaagatgccctgcgaaac
ctcgatgaacgcggcattattcgcatcggtgcctgggtagaagccagcgatatcctcgtc
gggaaagtcaccccgaaaggcgaatcggatcaaccacccgaagaaaaactactgcgggca
attttcggcgaaaaggcccgggatgtacgcgataactccctgcgcgttcccaacggcgaa
aaaggccgggtagtggatgtgcgcgtatttacccgcgaacagggagatgaattaccccct
ggggccaatatggtggtaagggtttacgttgcccaaaaacgcaaaatccaagtgggcgat
aaaatggcgggtcgtcacggcaataaagggattatttctcggattctgcccctagaagat
atgccctacctccccgatggtcgtcccgtcgatatcgttctcaatcccctaggggttccc
agtcgcatgaacgtcggtcaggtgtttgaatgtttactgggttgggccggcgaaaatctg
ggcgtgcgctttaagattactccctttgacgaaatgtacggggaagaagccagccgttta
accgtccacggattgctagaaaatgcctcgaaaaaacccaatcgcgattgggtgttcaag
gaagaacacgccggcaaagtcacggtttacgatggtcgcaccggcgaaccctttgaccgt
cccgttaccgtcggtatggcctatatgttaaaactggttcacctggttgatgataaaatt
cacgcccgttctactggtccctactccttggttactcagcaacccttgggcggtaaagct
caacagggaggccagcgcttcggagaaatggaagtctgggccctagaagcctacggggcg
gcctatactttgcaggaattgctaacggtaaaatccgatgatatgcaaggacggaatgag
gctttaaatgcgatcgtaaaaggcaagccgattccccgcccgggtacgccagaatccttt
aaggttttgatgcgagaattgcaatccctcggtctcgatatcgccgttcacaaggtggaa
aatgcccccgatggtacttcccgcgatgtggaggtggatctgatggtcgatgtcggtcgt
cgcgccccctctcgccccacctacgaatccttaaccacagaagaccttgaggaagaagaa
tcggaagtgtaa
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