Microbacterium sp. RG1: EHF32_10210
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Entry
EHF32_10210 CDS
T10164
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mice Microbacterium sp. RG1
Pathway
mice03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mice00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EHF32_10210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mice03021
]
EHF32_10210
03400 DNA repair and recombination proteins [BR:
mice03400
]
EHF32_10210
Enzymes [BR:
mice01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EHF32_10210
Transcription machinery [BR:
mice03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EHF32_10210
DNA repair and recombination proteins [BR:
mice03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EHF32_10210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QCQ17065
LinkDB
All DBs
Position
complement(2098806..2102309)
Genome browser
AA seq
1167 aa
AA seq
DB search
MAAAPHASTPTTKTPKNGRGASRLSFAKITDTLTVPDLLALQTESFDWLVGNDAWKARVA
EAQAAGRTDVPATSGLEEIFEEISPIEDLSETMQLSFTNPYLEPEKYSIEECKERGKTYA
APLYVEAEFMNHQTGEIKTQTVFMGDFPLQTDKGTFIINGTERVVVSQLVRSPGVYFDRV
ADKTSDKDIVSARVIPSRGAWLEFEIDKRDQVGVRIDRKRKQSVTVFLKALGLSSEDIMN
EFAGFSSIEETLEKDTILTKEDALRDIYRKLRPGEQVAAEAARALLDNFYFSSKRYDLAK
VGRYKINQKLGLDTPLTDSVLTVDDIVATIKYLVRLHRGDTTFEGVRAGKKAEIRIDVDD
IDNFGNRRIRAVGELIQNQVRTGLSRMERVVRERMTTQDIEAITPQTLINVRPVVAAIKE
FFGTSQLSQFMDQNNPLAGLTHKRRLSALGPGGLSRERAGVEVRDVHPSHYGRMCPIETP
EGPNIGLIGSLASFARINAFGFIETPYRRVVNGRVTTDIDYLTASEENDFIVAQAGVELT
AEGKFANERVLARRGQGGEVDLFPAEEIGYMDVSPRQMVSVATSLIPFLEHDDANRALMG
ANMQRQAVPLVRSESPVVGTGMEGYAAVDAGDVVTAKRSGVVAEVSADVVTVQTDEGGTD
DYFLRKFDRSNQGTSYNQRVVVSAGERIEAGEVIADGPATENGELALGKNLLVGFMTWEG
HNFEDAIILSQELVKDDTLSSIHIEEYEVDARDTKLGKEEITRDLPNVSPDLLKDLDERG
IIRIGAEVRPGDILVGKVTPKGETELSAEERLLRAIFNEKSREVRDTSLKVPHGEQGTII
AVKEFNAEDGDDELGSGVNRRVVVYIAQKRKITEGDKLAGRHGNKGVIAKILPVEDMPFL
ADGTPLDVILNPLGIPGRMNFGQVLELHLGWIAQQGWKVEGNPEWATNLPKEAFEAPAGT
KVATPVFDGAFESEIAGLLDSTNPTRDGVRLIDSSGKTTLFDGRSGEPFPAPISVGYMYI
LKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLT
IKSDDILGRVKVYEAIVKGENIQEPGIPESFKVLMKEMQSLCLNVEVLSADGTAVNLRDT
DDDAFRAAEELGINISSRFESSSIDEI
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
ttggctgccgcgccccacgcaagcacccccaccaccaagacccccaagaacggacgcggc
gcttcgcgtctgtccttcgcgaagatcaccgacacgctgacggtccccgaccttctcgcg
ctgcagacggagtccttcgactggctcgtcggcaacgacgcctggaaggcacgtgtcgcc
gaggcgcaggccgcaggtcgcaccgacgtgccggccacgagcggtctcgaggagatcttc
gaggagatctccccgatcgaagacctcagcgagacgatgcagctgagcttcaccaacccc
tacctcgagcccgagaagtactccatcgaggagtgcaaggagcgcggcaagacgtacgcg
gccccgctttacgtcgaggccgagttcatgaaccaccagaccggtgagatcaagacgcag
acggtcttcatgggcgacttcccgctccagaccgacaagggcacgttcatcatcaacggc
accgagcgcgtcgtcgtgtcgcagctcgtgcgttcgcccggtgtgtacttcgaccgcgtc
gccgacaagacgagcgacaaggacatcgtctcggcccgcgtcatccccagccgcggcgcc
tggctcgagttcgagatcgacaagcgcgaccaggtgggcgtgcgcatcgaccgcaagcgc
aagcagtcggtcaccgtcttcctgaaggcgctcggtctgtccagcgaagacatcatgaac
gagttcgcgggcttcagctcgatcgaggagaccctcgagaaggacacgatcctcaccaag
gaagacgcgctgcgcgacatctaccgcaagctccgtccgggcgagcaggtcgctgccgag
gctgcgcgtgcgctgctggacaacttctacttctcgtccaagcgctacgacctcgccaag
gtcggccggtacaagatcaaccagaagctgggtctcgacaccccgctgaccgactcggtg
ctcacggtcgacgacatcgtcgcgaccatcaagtacctcgtccgcctgcaccgcggcgac
acgaccttcgagggcgtgcgcgccggcaagaaggccgagatccgcatcgacgtcgacgac
atcgacaacttcggcaaccgtcgcatccgcgcggtcggcgagctcatccagaaccaggtc
cgcaccggtctgtcgcgcatggagcgcgtcgtgcgcgagcgcatgaccacgcaggacatc
gaggcgatcacgccgcagaccctgatcaacgtgcgtcccgtcgtggcggcgatcaaggag
ttcttcggaacctcgcagctgtcgcagttcatggaccagaacaacccgctcgcgggtctg
acccacaagcgtcgtctgtcggcgctgggccccggcggtctgtcgcgtgagcgcgccggc
gtcgaggtccgtgacgtccacccctcgcactacggccgcatgtgcccgatcgagacgccg
gaaggcccgaacatcggtctgatcggttcgctcgcctccttcgcgcgcatcaacgcgttc
ggtttcatcgagaccccgtaccgccgcgtcgtgaacggtcgcgtcaccacggacatcgac
tacctcaccgccagcgaggagaacgacttcatcgtcgctcaggccggtgtcgagttgacc
gccgaaggcaagttcgccaacgagcgagtgctcgcccgccgcggccagggcggcgaggtc
gacctcttcccggccgaagagatcggctacatggacgtctcgccgcgccagatggtgtcg
gtcgcgacctcgctgatccccttcctcgagcacgacgacgcgaaccgcgccctcatgggt
gcgaacatgcagcgccaggccgtgccgttggttcgcagcgagtcgcctgtggtcggaacc
ggtatggagggctacgcggccgtcgacgccggtgacgtcgtcaccgccaagcgttccggt
gtcgtggccgaggtctccgccgacgtcgtcaccgtccagacggatgagggcggcaccgac
gactacttcctgcgcaagttcgaccgctccaaccagggcacgtcgtacaaccagcgcgtc
gtggtctccgccggtgagcgcatcgaagccggcgaggtcatcgccgacggtcccgcgacc
gagaacggcgagctcgccctcggcaagaacctgctcgtcgggttcatgacgtgggagggt
cacaacttcgaggacgcgatcatcctcagccaggagctcgtgaaggacgacaccctctcc
tcgatccacatcgaggagtacgaggtcgacgcccgcgacacgaagctcggcaaggaggag
atcacgcgcgacctgccgaacgtgagccccgatctgctgaaggacctcgacgagcgcggc
atcatccgcatcggtgccgaggtccgccccggcgacatcctcgtcggcaaggtcacgccc
aagggcgagaccgagctctcggccgaggagcgcctgctgcgcgcgatcttcaacgagaag
agccgcgaggtccgtgacacctctctgaaggtgccccacggtgagcagggcacgatcatc
gccgtcaaggagttcaacgccgaggacggcgacgacgagctcggctccggtgtcaaccgc
cgggtcgtggtctacatcgcccagaagcgcaagatcaccgagggcgacaagctcgccggc
cgccacggcaacaagggtgtcatcgcgaagatccttcccgtcgaggacatgcccttcctc
gccgacggcacgccgctcgacgtcatcctcaacccgctcggtatccccggtcgaatgaac
ttcggtcaggtcctcgagctccacctcggctggatcgcccagcagggctggaaggtcgag
ggcaacccggagtgggccacgaacctgccgaaggaggccttcgaggcccccgccggcacc
aaggtcgccaccccggtgttcgacggtgcgttcgagtcggagatcgcgggtctgctcgac
tcgacgaacccgacccgtgacggcgtgcgactgatcgactccagcggtaagaccacgctg
ttcgacggtcgcagcggagagcccttcccggcaccgatctccgtcggctacatgtacatc
ctgaagctgcaccacctcgtggacgacaagatccacgcgcgctccaccggtccgtactcg
atgatcacgcagcagccgctgggtggtaaggcgcagttcggcggccagcgcttcggtgag
atggaggtgtgggccctcgaggcctacggcgccgcctacgcgctgcaggagctcctcacg
atcaagtccgacgacatcctcggccgcgtcaaggtgtacgaggcgatcgtcaagggcgag
aacatccaggagcccggtatccccgagtccttcaaggtgctcatgaaggagatgcagtcg
ctctgcctgaacgtcgaggtcctctcggccgacggtacggctgtcaacctgcgcgacacc
gatgacgacgccttccgcgctgcggaggagctcggcatcaacatctccagccggttcgag
tcctcgtccatcgacgagatctga
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integrated database retrieval system
