Microbacterium sp. J1-1: LRQ07_03940
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Entry
LRQ07_03940 CDS
T11495
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
micj Microbacterium sp. J1-1
Pathway
micj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
micj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LRQ07_03940
Enzymes [BR:
micj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LRQ07_03940
Transcription machinery [BR:
micj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LRQ07_03940
DNA repair and recombination proteins [BR:
micj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LRQ07_03940
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UUE21433
LinkDB
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Position
833115..836618
Genome browser
AA seq
1167 aa
AA seq
DB search
MAAARNASTSTTTKNGRGASRLSFAKISDTLTVPDLLALQTESFGWLVGNDAWKARVAEA
KKQGRTDVNENSGLGEIFEEISPIEDLGETMQLSFTNPYLEPEKYSIEECKERGKTYAAP
LYVEAEFMNHLTGEIKTQTVFMGDFPLQTDKGTFIINGSERVVVSQLVRSPGVYFDKTPD
KTSDKDIVSARVIPSRGAWLEFEIDKRDQVGVRVDRKRKQSVTVFLKALGMTSEEILAEF
AGYTSIEETLAKDTIVTKEDALRDIYRKLRPGEQVAAEAARALLDNFYFNPKRYDLAKVG
RYKINHKLGLDQPLTSSVLTVEDIVATIKYLVRLHAGTEETFTGIRGGKKAEIRLATDDI
DNFGNRRIRAVGELIQNQVRTGLSRMERVVRERMTTQDIEAITPQTLINVRPVVAAIKEF
FGTSQLSQFMDQNNPLAGLTNKRRLSALGPGGLSRDRAGVEVRDVHPSHYGRMCPIETPE
GPNIGLIGALATFARINSFGFIETPYRKVVDGVVTEQIDYLTASEEVDFNIAQANAPLDA
KGRFLESHVLARPKGGSGEVDMFLPEDIGYIDVSPRQMVSVATSLVPFLEHDDAQRALMG
ANMQRQAVPLLRSDSPLVGTGMEGYTAIDAGDVLTAEKAGVVSEVSADRVVVMLDEGGTQ
EYHLRKFDRSNQGTSYNQKVVVNAGERVEVGEVIADGPATENGELALGKNLLVAFMTWEG
YNFEDAIILSQDLVKDDTLSSIHIEEYEVDARDTKLGKEEITRDLPNVSPELLKDLDERG
IIRIGAEVRPGDILVGKVTPKGETELSAEERLLRAIFNEKSREVRDTSLKVPHGEQGTII
AVKEFNAEDGDDELGSGVNRRVVVYIAQKRKITEGDKLAGRHGNKGVIAKILPIEDMPFM
ADGTPVDIVLNPLGIPGRMNFGQVLETHLGWIAKQGWKVEGTPEWAVRLPEEAFEAAPGT
KVATPVFDGASEEEIAGLLDATTPTRDGVRLIDSSGKAQMFDGRSGEPFPAPISVGYMYI
LKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLT
IKSDDILGRVKVYEAIVKGENIQEPGIPESFKVLMKEMQSLCLNVEVLSADGTLVNLRDT
DDEAFRAAEELGINISSRFEAASIDEI
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
ttggctgctgctcgcaacgcatccacatccaccaccaccaagaacggacgcggagcttcc
cgtctttcgttcgccaagatctccgacacgctgacggtccctgaccttctcgctctgcag
accgaatccttcggttggctggtcggcaacgacgcctggaaggcgcgcgtggccgaggcc
aagaagcaggggcgcacggacgtcaacgagaacagcggtctgggcgagatcttcgaggag
atctccccgatcgaggacctcggcgagacgatgcagctgtcgttcacgaacccctacctc
gagccggagaagtactcgatcgaggagtgcaaggagcgtggcaagacctacgccgctccg
ctgtacgtcgaggccgagttcatgaaccacctcacgggtgagatcaagacccagacggtc
ttcatgggcgacttcccgctgcagaccgacaagggcacgttcatcatcaacggctccgag
cgcgtcgtcgtctcgcagctggtccgctccccgggtgtctacttcgacaagacccccgac
aagacgtccgacaaggacatcgtgtcggcgcgcgtcatcccgagccgtggtgcatggctc
gagttcgagatcgacaagcgcgaccaggtcggcgtgcgcgtcgaccgcaagcgcaagcag
tcggtcaccgtcttcctcaaggcgctgggcatgaccagcgaggagatcctcgccgagttc
gccggctacacctcgatcgaggagacgctcgcgaaggacacgatcgtcacgaaggaagat
gcgctccgcgacatctaccgcaagctccgtccgggcgagcaggtcgccgccgaggccgcc
cgcgccctcctggacaacttctacttcaacccgaagcgctacgacctggccaaggtcggt
cgttacaagatcaaccacaagctgggcctggaccagccgctgacctcctcggtgctcacc
gtcgaggacatcgtggccacgatcaagtacctcgtccgcctgcacgcgggcaccgaggag
accttcacgggcatccgcggtggcaagaaggccgagatccgtctcgcgaccgatgacatc
gacaacttcggcaaccgtcgcatccgcgcggtcggcgagctcatccagaaccaggtccgc
accggtctctcccgcatggagcgcgtcgtccgcgagcgcatgaccacgcaggacatcgag
gcgatcacgccgcagaccctgatcaacgtgcgccccgtcgtcgccgcgatcaaggagttc
ttcggaacgtcgcagctgtcgcagttcatggaccagaacaacccgctcgcaggtctgacg
aacaagcgtcgtctctccgcgctcggacccggtggtctctcgcgtgaccgcgccggcgtt
gaggtccgtgacgtccacccctcgcactacggccgcatgtgcccgatcgagactccggaa
ggcccgaacatcggtctgatcggtgcgctcgcgaccttcgcgcgcatcaactcgttcggt
ttcatcgagaccccgtaccgcaaggtcgtcgacggcgtcgtgaccgagcagatcgactac
ctcacggcttccgaagaggtcgacttcaacatcgcgcaggcgaacgccccgctcgatgcc
aagggtcgcttcctcgagagccacgtcctggcccgccccaagggcggcagcggcgaggtc
gacatgttcctgccggaagacatcggctacatcgacgtctccccgcgccagatggtgtcg
gtcgcgacctcgctcgtgccgttcctcgagcacgacgacgcacagcgcgccctcatgggt
gccaacatgcagcgtcaggccgtcccgctgctgcgcagcgactcgccgctcgtcggaacc
ggtatggagggctacacggccatcgacgccggtgacgtcctcaccgccgagaaggccggt
gtcgtctccgaggtctccgcagaccgcgtcgtcgtcatgctcgacgagggcgggacgcag
gagtaccacctccgtaagttcgaccgctcgaaccagggcacgtcgtacaaccagaaggtc
gtcgtcaacgccggtgagcgcgtcgaggtcggagaggtcatcgccgatggtcccgccacc
gagaacggcgagctggccctcgggaagaacctcctcgtcgcgttcatgacgtgggagggc
tacaacttcgaggacgcgatcatcctgagccaggacctggtgaaggacgacaccctctcc
tcgatccacatcgaggagtacgaggtcgacgcgcgcgacaccaagctcggcaaggaggag
atcacccgtgacctccccaacgtcagcccggagctgctgaaggacctcgacgagcgcggc
atcatccgcatcggcgccgaggtgcgccccggcgacatcctcgtcggcaaggtcacgccg
aagggtgagaccgagctgtcggctgaggagcgtctgctgcgcgcgatcttcaacgagaag
agccgcgaggtccgcgacacgtccctgaaggtgcctcacggtgagcagggaaccatcatc
gcggtcaaggagttcaacgccgaggacggcgacgacgagctcggctccggtgtcaaccgc
cgcgtcgtggtctacatcgcccagaagcgcaagatcaccgagggtgacaagctcgccggc
cgtcacggcaacaagggtgtcatcgcgaagatcctcccgatcgaggacatgccgttcatg
gcggacggcaccccggtcgacatcgtcctgaacccgctcggcatcccgggtcgaatgaac
ttcggtcaggtgctcgagacccacctcgggtggatcgcgaagcagggctggaaggtcgag
ggcaccccggagtgggccgtccgtctgccggaggaggccttcgaagctgctcccggtacg
aaggtcgccaccccggtgttcgacggtgcgagcgaggaggagatcgctggtctcctcgac
gcgacgaccccgacccgcgacggtgtgcgcctgatcgactcgagcggaaaggcccagatg
ttcgacggccgctccggcgagccgttcccggccccgatctccgtgggctacatgtacatc
ctgaagctgcaccacctggtcgacgacaagatccacgcacgttccacgggtccgtactcg
atgatcacccagcagccgctcggtggtaaggcgcagttcggtggacagcgcttcggtgag
atggaggtgtgggccctcgaggcctacggcgccgcatacgcgctccaggagctcctcacg
atcaagtccgacgacatcctcggccgcgtcaaggtgtacgaggcgatcgtcaagggcgag
aacatccaggagcccggcatccccgagtccttcaaggtgctcatgaaagagatgcagtcg
ctctgcctgaacgtcgaggtcctctcggccgacggcacactggtgaacctccgcgacacc
gacgatgaggcgttccgcgccgcggaagagctcggtatcaacatctccagccgcttcgag
gccgcctcgatcgacgagatctaa
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