KEGG   Methanotorris igneus: Metig_1229
Entry
Metig_1229        CDS       T01510                                 
Name
(GenBank) Signal recognition 54 kDa protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
mig  Methanotorris igneus
Pathway
mig02024  Quorum sensing
mig03060  Protein export
mig03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:mig00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Metig_1229
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Metig_1229
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Metig_1229
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:mig02044]
    Metig_1229
Enzymes [BR:mig01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Metig_1229
Secretion system [BR:mig02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Metig_1229
  Eukaryotic Sec-SRP protein
   Metig_1229
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 CbiA cobW AAA_17 Zeta_toxin nSTAND3 AAA_19 AAA_30 6PF2K CLP1_P NPHP3_N ResIII AAA_33 APS_kinase AAA_16 SLFN-g3_helicase AAA_18 AAA_24 SWI2_SNF2 MobB KTI12 Thymidylate_kin NACHT LpxK DO-GTPase2 AAA_5 MMR_HSR1 TsaE nSTAND_NTPase7 MeaB ParA AAA RNA_helicase ATP_bind_1 AAA_14 G-alpha TrwB_AAD_bind AAA_28 AAA_7 AAA_25 SRPRB UPF0004 AAA_26 KAP_NTPase AAA_31
Other DBs
NCBI-ProteinID: AEF96766
UniProt: F6BE89
LinkDB
Position
complement(1230532..1231887)
AA seq 451 aa
MLEKLGESINKALNKIKNATFVDKKLVKEVIKDIQKALIQADVNVKLVLQMSKTIEKRAI
EETPPKGFSKKEHIIKIVYEELVKLLGEEPKPLELNPKKQTVILLVGIQGSGKTTTAAKL
ARYIQKRGLKPALIAADTYRPAAYEQLKQLAEKIHVPLYGDETRTKSPIDIAKEGLEKFK
KADVIIIDTAGRHKEEKGLLEEMKMMKEITNPDEIILVIDGTLGQQARNQAKAFKDAVGD
IGSIIVTKLDGSAKGGGALSAVAEIKAPIKFIGTGEGIDDLEPFDPKKFISRLLGMGDLD
SLLEKADELVDEKTEESIDAILRGKFTLNELYAQLEAINKMGPIKQIMNMIPGFGAGLPK
EVVQITEQKLKKYRIIMDSMTKEEKENPEIIKASRIERIARGAGVKPEEVKELLRYYATT
KRAIENLKRGKMLKMGGPIGQIMRQLMFKEK
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcttgaaaaattgggagaaagtatcaataaagcattaaataaaataaaaaacgccaca
tttgttgataaaaaattggttaaagaagtgattaaggacatccaaaaggcattaattcaa
gcggatgttaatgtaaagctggttctccaaatgagtaagacaattgaaaaaagggctatt
gaagaaaccccaccaaaaggattttcaaagaaagagcacatcataaaaattgtctatgag
gaattagtaaaacttttgggagaagaaccaaaaccattagagttaaatccaaaaaaacag
acagtcatactgcttgttggtattcaaggtagtggaaaaacaacaactgcagcaaaatta
gcaagatacatccaaaaaagaggattgaagcctgctttaattgcagcagatacttatagg
cctgctgcttatgagcagttgaaacaacttgccgagaaaatacatgtgcctttgtatgga
gacgaaacaagaacaaaatcaccaatagacatagcaaaagaaggtcttgaaaaattcaaa
aaggcagatgtaataatcatagatactgctggaagacataaagaagagaaagggttgtta
gaagaaatgaagatgatgaaggaaataacaaatccagacgagattatattagtcattgat
ggaacacttggacaacaggcaagaaatcaagcaaaggcatttaaagatgcagttggagat
attggaagtattatagttactaaattggatggttctgcaaagggtgggggagcattaagt
gctgttgctgaaataaaagcaccaataaaattcattggaactggagaaggaattgacgat
ttagagccatttgacccaaaaaaattcatctcaagactcttgggaatgggagatttagat
tcattgttggaaaaggcagacgaattagtagatgagaaaactgaggagagcatagatgct
atattaagggggaaatttacacttaacgagctctatgctcaattagaggcaataaacaaa
atggggcctatcaagcaaataatgaacatgataccaggatttggtgcaggactcccaaaa
gaagtagtccagataacagaacaaaaactaaaaaaatacagaattattatggactcaatg
acaaaagaagaaaaagagaacccagaaataattaaagcatcaagaatcgaaagaattgcg
agaggtgcgggagttaagccagaagaagttaaggaattgttaagatattatgcaacaacc
aaacgagccattgaaaatttaaaaagaggtaagatgctaaagatggggggacctattggg
caaattatgaggcaattaatgtttaaagaaaaataa

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