Microbacterium sp. BH-3-3-3: BJP65_04965
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Entry
BJP65_04965 CDS
T04827
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
mih
Microbacterium sp. BH-3-3-3
Pathway
mih03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BJP65_04965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mih03400
]
BJP65_04965
Enzymes [BR:
mih01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
BJP65_04965
DNA repair and recombination proteins [BR:
mih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BJP65_04965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AOX45229
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All DBs
Position
1071161..1072009
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AA seq
282 aa
AA seq
DB search
MARSVRIVSVNVNGIRAAVRKGMTEWLDASGADIVTLQEVRATAEQLAEALPGWQIVNDE
ALQKGRAGVAIISRLPGIATRTHLGPEPLDASGRWIETDFDIDGETVTIVSAYVHSGEVD
TPKQDAKWVFLDAMEQRLADLASERELALVTGDLNVGHRELDIKNWRGNRKNAGFLPRER
AYFDRFFGPAGEQVEGVDGSTGAGLGWVDVGRRAVGEVDGPYTFWSMRGKAFDTDSGWRI
DYHVATPALAERVTSYHVERAASYDTRWSDHAPVIVDYTLGA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
gtggctcgttccgtacgtatcgtctccgtcaacgtcaatggcatccgtgccgccgtccgc
aagggcatgaccgaatggctcgacgcctccggcgccgacatcgtcacccttcaagaggtg
cgggcgaccgccgaacagctggccgaggcgctgcccggctggcagatcgtcaacgacgag
gccctgcagaagggccgcgccggtgtcgcgatcatcagtcggctgcccggtatcgcgacg
cgcacccacctcgggcccgagccgctcgacgcctcgggccgctggatcgagaccgacttc
gacatcgacggcgaaaccgtcaccatcgtcagcgcgtacgtgcacagcggcgaggtcgac
actcccaagcaagacgcgaagtgggtgttcctcgatgccatggagcagcggttggccgat
ctggcttcggagcgcgagctggctctcgtcacgggtgacctcaacgtcggccatcgcgag
ctcgacatcaagaactggcgcggcaaccgcaagaacgccggcttcctcccgcgtgagcgc
gcgtacttcgaccggttcttcggaccggccggcgagcaggtcgagggcgtcgacggttcc
accggtgcgggcctcggctgggtcgacgtgggtcgtcgcgccgtcggcgaggtcgacggc
ccgtacacgttctggtcgatgcgcggaaaggcgttcgacaccgacagcggctggcgcatc
gactaccacgtcgccactccggccctcgcggagcgcgtcacgagctatcacgtggagcgc
gccgcctcgtacgacacccgctggagcgaccacgctccggtgatcgtcgactacacgctc
ggcgcctga
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